prot_P-littoralis_Contig149.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig149.42.1
Unique Nameprot_P-littoralis_Contig149.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length82
Homology
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: D7FW88_ECTSI (40S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW88_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 3.360e-52
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81
            MQNEAGSNVDLYIPRKCSWTNRLLQAKDHS+TQINVGKLDP SGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL
Sbjct:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: B8BZU9_THAPS (40S ribosomal protein S21 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZU9_THAPS)

HSP 1 Score: 114 bits (285), Expect = 1.440e-31
Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81
            MQNE G NVDLYIPRKCSWTNRL++AKDH + QINV  +DP +G FTGES  YA+AGY+R + E D A T LV   D+  L
Sbjct:    1 MQNENGENVDLYIPRKCSWTNRLIRAKDHGSVQINVANVDPVTGLFTGESTAYAMAGYIRDKSEGDMAFTALVEANDKKVL 81          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: A0A1Z5KP36_FISSO (40S ribosomal protein S21 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP36_FISSO)

HSP 1 Score: 114 bits (284), Expect = 2.050e-31
Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNE+G NVDLY+PRKCS+TNRL+QAKDH+A QINV  +DP +G  TG+S+VY LAGY+R + E D ALT LV  KD
Sbjct:    1 MQNESGQNVDLYVPRKCSYTNRLIQAKDHAAVQINVANVDPVTGIMTGDSNVYCLAGYIRFKSEGDMALTSLVRAKD 77          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: A0A024TLB5_9STRA (40S ribosomal protein S21 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLB5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.460e-30
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDE 78
            MQN+AG N+D+YIPRKCSWTNR+L AKDH++ QI V K+D  +G +TG++DVYAL+GY+R +GE D ALT LV K +E
Sbjct:    1 MQNDAGQNIDIYIPRKCSWTNRILSAKDHASVQIAVAKVD-ANGVYTGQNDVYALSGYIRAKGEGDHALTDLVRKAEE 77          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP)

HSP 1 Score: 110 bits (275), Expect = 4.200e-30
Identity = 49/77 (63.64%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNEAG ++D+YIPRKCSWTNR+L AKDH++ QINVG+++  +G FTGESD YALAGY+R  GE D+A+T L  + D
Sbjct:    1 MQNEAGQSIDIYIPRKCSWTNRILAAKDHASVQINVGRVN-ANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: A0A7S0FIC7_9STRA (40S ribosomal protein S21 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIC7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.430e-29
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNE G NVDLY+PRKCSWTNRLL + DH + QINVG +DP +G FTGES  +A++GY+R + EAD ALT L    D
Sbjct:    1 MQNENGDNVDLYVPRKCSWTNRLLTSGDHGSVQINVGNVDPVTGLFTGESTPFAISGYVRAKSEADMALTALAKAND 77          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: A0A835Z072_9STRA (40S ribosomal protein S21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z072_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.970e-29
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNE+G +VDLY+PRKCSWTNRLL AKDH++ QINV K+DP +G  TG  +V+ALAG+LR  G++D AL  L ++KD
Sbjct:    1 MQNESGKDVDLYVPRKCSWTNRLLVAKDHASVQINVAKIDPQTGVATGAHEVFALAGFLRRLGQSDNALAALSSQKD 77          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD)

HSP 1 Score: 108 bits (270), Expect = 2.430e-29
Identity = 49/77 (63.64%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNEAG ++D+YIPRKCSWTNR+L AKDH++ QINV +++  +G FTGESD +ALAGY+R +GEAD ALT L  + D
Sbjct:    1 MQNEAGESIDIYIPRKCSWTNRILAAKDHASVQINVARVN-ANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: A0A448Z9N0_9STRA (40S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9N0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.080e-29
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNEAG NVDLY+PRKC+WTNRL++AKDHS+ Q+NV  +DP +G  TG++  Y L GY+R   E D ALT LV K D
Sbjct:    1 MQNEAGENVDLYVPRKCNWTNRLVEAKDHSSVQVNVANVDPVTGLATGDATPYCLVGYIRKISEGDMALTALVEKND 77          
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Match: A0A8J2SUB2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUB2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.270e-28
Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDES 79
            MQN+ G  VDLYIPRKCSWTNRL+ A D ++ QINVG +DP +G  TG S+ YAL+GY+R +GE+D ALT LV K+DES
Sbjct:  109 MQNDQGQPVDLYIPRKCSWTNRLIGASDQASVQINVGTIDPNTGLHTGGSETYALSGYVRNKGESDMALTELVRKQDES 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW88_ECTSI3.360e-5297.5340S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID... [more]
B8BZU9_THAPS1.440e-3162.9640S ribosomal protein S21 n=1 Tax=Thalassiosira ps... [more]
A0A1Z5KP36_FISSO2.050e-3166.2340S ribosomal protein S21 n=1 Tax=Fistulifera sola... [more]
A0A024TLB5_9STRA1.460e-3062.8240S ribosomal protein S21 n=3 Tax=Aphanomyces TaxI... [more]
G4ZUD9_PHYSP4.200e-3063.6440S ribosomal protein S21 n=7 Tax=Peronosporaceae ... [more]
A0A7S0FIC7_9STRA1.430e-2962.3440S ribosomal protein S21 n=1 Tax=Minutocellus pol... [more]
A0A835Z072_9STRA1.970e-2962.3440S ribosomal protein S21 n=1 Tax=Tribonema minus ... [more]
K3WSU9_GLOUD2.430e-2963.6440S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID... [more]
A0A448Z9N0_9STRA4.080e-2961.0440S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia... [more]
A0A8J2SUB2_9STRA1.270e-2863.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 1..77
e-value: 2.4E-32
score: 110.9
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 1..80
e-value: 2.0E-30
score: 102.7
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 1..76
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 1..79
e-value: 1.6E-30
score: 106.9
NoneNo IPR availablePANTHERPTHR10442:SF040S RIBOSOMAL PROTEIN S21coord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:168130..170534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.42.1mRNA_P-littoralis_Contig149.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig149 168130..170534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig149.42.1 ID=prot_P-littoralis_Contig149.42.1|Name=mRNA_P-littoralis_Contig149.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=82bp
MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSATQINVGKLDPTSGTFTGES
DVYALAGYLRGRGEADEALTCLVNKKDESEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001931Ribosomal_S21e
IPR038579Ribosomal_S21e_sf