mRNA_P-littoralis_Contig148.143.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 278 bits (711), Expect = 3.020e-91 Identity = 139/169 (82.25%), Postives = 148/169 (87.57%), Query Frame = 2
Query: 107 SRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPRLCACF 613
SRERVARKA Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVAI GCVLDMCGGPEDAVAQ F TCEVLTND+SSRLS T+LDAS+LSFRD+F KAN GK+PDWVVTSPPYKGAVGFVKAALAVATKG ALKLPLSFLEPCADRGGWL + P F
Sbjct: 93 SRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIF 261
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.030e-68 Identity = 111/178 (62.36%), Postives = 133/178 (74.72%), Query Frame = 2
Query: 98 RRASRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSP-----DTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPRLCACF 613
R ++ R +A Q RH +W+ PEP H KRR LDRYCTSPEAV+AL AV + GCVLDMCGGP DA+A R G TC+V+TND+S+RLSP DT+LDAS+ SF DFL A G+RPDWV+TSPPYKGA+ +VK+AL++A KG ALKLPLSFLEPCADRGGWL A P +C F
Sbjct: 44 REKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 207 bits (528), Expect = 1.600e-64 Identity = 108/169 (63.91%), Postives = 125/169 (73.96%), Query Frame = 2
Query: 101 RASRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPRLC 604
R SR R+A + P+ W+ APEPV KRR +DRYCTSP ++AL V+I GCVLDMCGG +DAVA R TC+VLTND+ RLSP T+LDAS SF DDFL A+ G++PDW+VTSPPYKGA+ FVKAAL VA KG ALKLPLSFLEPCADR GWL A P LC
Sbjct: 37 RDSRAPTKRRAKRGPK----WTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALC 201
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 204 bits (519), Expect = 2.710e-64 Identity = 103/124 (83.06%), Postives = 109/124 (87.90%), Query Frame = 2
Query: 98 RRASRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLSFRDDFLKANSGKRPDWVVTSPP 469
R SRERVA KA QTPRHSR WSAAPEPVTHDKRRRLDRYCTSP AVDALRDAV I GCVLDMCGGPE AVA FGGTCEVLTND+ SRLSPD++LDAS+LSF DFLKA+ GK+PDWVVTSPP
Sbjct: 24 RARSRERVAWKAEQTPRHSRTWSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQPDWVVTSPP 147
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 199 bits (506), Expect = 1.460e-61 Identity = 101/159 (63.52%), Postives = 119/159 (74.84%), Query Frame = 2
Query: 131 ASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPRLC 604
A++TPRH++ APEP TH +RR LDRYCTSPEA+DA AV I GCVLDMCGGP DAVA R TCE+LTND+SS DT+LDAS+ SF +DFL A SGKRP+WV TSPPY A+ FVKAA+++ATKG K+ + FLEPCAD GGWL P LC
Sbjct: 2 AARTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLC 160
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.190e-57 Identity = 101/173 (58.38%), Postives = 121/173 (69.94%), Query Frame = 2
Query: 95 SRRASRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPRLCACF 613
S+ S++R ARKA+QTPRH+ PEP TH KRR LDRYCTSPEAV+AL AV+I GC+LD+CGGP DAVA R G TCEVLTND+SS DT+LDAS+ SF DDF A+SGKRPDWVVTSP YK A+ FVKAA+++AT+G + P + P LCA F
Sbjct: 56 SKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAPTGVVG--------FKRIPHLCASF 220
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 178 bits (452), Expect = 3.610e-52 Identity = 95/155 (61.29%), Postives = 110/155 (70.97%), Query Frame = 2
Query: 161 WSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLS------PDTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPRLC 604
W++APEP H KRR LDRYCTS AV+AL DAV + G VLDMCGGP+DAVA++ TCEV+TND+SSRLS PDT LDAS +F +FL ++P+ VV SPPYKGAV FVKAAL VA G ALK LSFLEPC DR WL A P +C
Sbjct: 101 WTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVC 255
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 164 bits (416), Expect = 3.350e-48 Identity = 96/166 (57.83%), Postives = 111/166 (66.87%), Query Frame = 2
Query: 62 RVACWSCTRSTSRRASRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEP 559
R+A + C ST +R +V R+A+ P A ++ RRRLDRYCTSP AVDALR AVAI GCVLDMCGGPEDAVAQ FGGTC T+LDAS++ F D+F+K N GK+PDWVVTSPPYKG+VGFV AALAVATKG ALKL L P
Sbjct: 3 RIAPFICEISTGKRWRGRQVRRRATAGP------GAPLLNLSRTTRRRLDRYCTSPAAVDALRAAVAITGCVLDMCGGPEDAVAQGFGGTC--------------TNLDASLVYFPDEFIKDNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNP 148
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5JUT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT6_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.730e-45 Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 2
Query: 107 SRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSRLSPDTDLDASVLS 403
SRERVARKA Q PRHSR WSAAPEPVTHDK RRLDRYCT PEAV+ L++AVAI GCVLDMCGGPEDAVAQ F TCEVLTND+SSRLS T+LDAS+L+
Sbjct: 59 SRERVARKAKQMPRHSRMWSAAPEPVTHDKCRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLN 157
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 156 bits (395), Expect = 5.650e-45 Identity = 77/86 (89.53%), Postives = 79/86 (91.86%), Query Frame = 2
Query: 107 SRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAIPGCVLDMCGGPEDAVAQRFGGTCEVLTNDMSSR 364
SRERVARKA QTPRHSR WSAAPEPVTH KRRR DRYCTSPEAVDALRDAVAI GCVLDMCGGP+DAVA FGGTCEVLTND+SSR
Sbjct: 100 SRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.143.1 >prot_P-littoralis_Contig148.143.1 ID=prot_P-littoralis_Contig148.143.1|Name=mRNA_P-littoralis_Contig148.143.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=70bp RFPGFQSIAAGTNLLARCKQSGCLLELYKKHESARKQGTRGAEGKSDAAPback to top mRNA from alignment at P-littoralis_Contig148:486559..487314- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.143.1 ID=mRNA_P-littoralis_Contig148.143.1|Name=mRNA_P-littoralis_Contig148.143.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=756bp|location=Sequence derived from alignment at P-littoralis_Contig148:486559..487314- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:486559..487314- >mRNA_P-littoralis_Contig148.143.1 ID=mRNA_P-littoralis_Contig148.143.1|Name=mRNA_P-littoralis_Contig148.143.1|organism=Pylaiella littoralis U1_48|type=CDS|length=210bp|location=Sequence derived from alignment at P-littoralis_Contig148:486559..487314- (Pylaiella littoralis U1_48)back to top |