mRNA_P-littoralis_Contig148.139.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: D7G7V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V7_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 3.270e-143 Identity = 221/310 (71.29%), Postives = 232/310 (74.84%), Query Frame = 3
Query: 333 PSVSGNKRPREGEEVGAAVQGGTSKSK---------HHPFPTECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGGVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAARL 1235
PS G KRPR G+ GAA K + HHPFPTE YGDHFETPLQAYRD+E ALA+L+KLL KK+KHLRIWDPYYCAGRTPRLL QLGF KVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLG AAGPGGEPFYVVPE KY FDHPEGTGHADSPF+GVWYVHCGSHTEAVF+G +KRGGVSVLRSLDELS+TG V+TERRLNPRQRKALKKKR AAAA L
Sbjct: 68 PSDQGKKRPR-GDGAGAAAASLAGKKRPRESLAAPHHHPFPTE------------------------------------------YGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGPAAGPGGEPFYVVPENKYYFDHPEGTGHADSPFTGVWYVHCGSHTEAVFEGTITQKRGGVSVLRSLDELSQTGAVTTERRLNPRQRKALKKKRMAAAAELL 334
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A8J4APU4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4APU4_9CHLO) HSP 1 Score: 215 bits (548), Expect = 5.990e-60 Identity = 108/234 (46.15%), Postives = 144/234 (61.54%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGE-PFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKR----------------GG---VSVLRSLDELSRTGTVSTERRLNPRQRKALK 1202
Y DHFE+PLQA +D+E L +LS L K K L ++DPY+C G + QLGF H N+DFYK V P +D+L+TNPPYS DHK+R LE+C SGKPW LL+PNYVATK Y+ +L + P + PF++ P+ +YS++HPEGTGHA+SPF +WY+ G +TE ++K A GG VSV R++D L + V T RRLNP+QR +K
Sbjct: 113 YNDHFESPLQAVQDIEPVLQLLSIKLKKSKSSLTVYDPYFCQGGIRQHYEQLGFKNFIHRNRDFYKDVDSGNVPSYDILVTNPPYSSDHKERILEFCLRSGKPWALLLPNYVATKAYFS-ELLDSVSTPAAQRPFFLTPQARYSYEHPEGTGHAESPFFSIWYIGLGEYTETIYKACKARLEPQSNGSSIQSEAAAGLGGRWRVSVARTVDALKQAKAVPTARRLNPKQRARMK 345
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A7S1IGA0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGA0_9EUGL) HSP 1 Score: 211 bits (537), Expect = 7.150e-59 Identity = 103/215 (47.91%), Postives = 140/215 (65.12%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAE--KRGGVSVLRSLDELSRTGTVSTERRLNPRQRKAL 1199
YGDHFET QAY+D+ L ++L+ + L I+DP+YC G R LA LGFH V H +DFY V+ + P+HD+LITNPPYSGDHK+R LEYC ASGKPW LL+PNY+ATK+YY+ + EPFY V +Y F HPEGTGH SPF G W+++ G HTE +++ + + ++ R++D+L + V R +NP++RKAL
Sbjct: 97 YGDHFETCDQAYKDITPLLKEAARLMQRDASSLGIYDPFYCDGAVKRHLAALGFHTVHHEKRDFYADVKNGQVPEHDILITNPPYSGDHKERILEYCCASGKPWALLLPNYIATKNYYQSTLAKHKQ----EPFYFVSRERYMFYHPEGTGHDTSPFEGFWFLYLGPHTEHLYQWSVQNLPRSSYKALTRTVDDLLQKRLVPAPR-MNPKRRKAL 306
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A2J8ADG8_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ADG8_9CHLO) HSP 1 Score: 213 bits (541), Expect = 8.860e-59 Identity = 109/240 (45.42%), Postives = 144/240 (60.00%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFK-------------GAFAEKRGG-----------VSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
Y DHFET +A +D+ L LSK L K L ++DP+YCAG A LG K H N+DFY V++ P +D+L+TNPPYSGDHK+R LE+C SGKPW LL+PNYVATK Y+ + P PF++ P +YS+DHPEGTGH +SPF +WYV G+HTE V+ GA +++GG V++ RS+D L + V T +RLNP+QRK LK+K
Sbjct: 124 YNDHFETDFRAVQDILPVLQQLSKRLCKPLSELAVYDPFYCAGGVRAHYAALGITKFIHRNRDFYDDVKKGALPSYDILVTNPPYSGDHKERILEFCLRSGKPWCLLMPNYVATKAYFGQLQDAASTPPLQRPFFLTPHARYSYDHPEGTGHTESPFFSIWYVCLGAHTEGVYGSCRSRLDAAPAAGGAADQRQGGAPAGXXXAAWGVALARSVDALRQAKAVPTGKRLNPQQRKRLKQK 363
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A6U0XTY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XTY6_9STRA) HSP 1 Score: 206 bits (523), Expect = 7.260e-58 Identity = 107/220 (48.64%), Postives = 140/220 (63.64%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYV--VPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGGVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRS 1214
YGDHFETPL AY+ + L ++K L KK K LRI+DP+YCAG +A LGF ++ H N+DFY+ E R P DVL+TNPPYS DHK+R L +C SGKPW LL+PNYVATK YY G + P PF+V +P ++Y + HPEGTGH +SPF +W+V + + V G + G V+ S+ +L + V RRLNPRQRKA K+R+
Sbjct: 15 YGDHFETPLIAYKHLRPVLCWIAKRLGKKPKELRIYDPFYCAGAVVGRMASLGFPRLIHRNEDFYRCESEGRVPAFDVLVTNPPYSLDHKERILNFCVTSGKPWALLMPNYVATKQYYTNLTSGGSGAPP-TPFFVAPLPGSRYQYTHPEGTGHDNSPFESMWFVDAMAGKKEVM-GELSPAEGS-RVMLSIADLKQARCVRPGRRLNPRQRKAAAKRRA 231
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A150GNL1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GNL1_GONPE) HSP 1 Score: 201 bits (512), Expect = 2.200e-56 Identity = 98/210 (46.67%), Postives = 131/210 (62.38%), Query Frame = 3
Query: 600 DVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGG-------VSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
D++ L L K L K+ L ++DP++C G + LGF H N+DFYK V P +D+L+TNPPYS DHK+R L++C SGKPW LL+PNYVATK Y+ + A P PF++ P +Y++DHPEGTGHA+SPF +WYV GSHTEAV+ A+ G VS+ RS++ L + V T +RLNP+QR LKKK
Sbjct: 17 DLQPVLTALCKKLKKRPSQLVVYDPFFCKGGIRKHYEALGFTSFVHENRDFYKDVEAGALPDYDILVTNPPYSEDHKERILDFCLRSGKPWALLLPNYVATKAYFSSLLADTATPPPQRPFFLTPRVRYTYDHPEGTGHAESPFYSIWYVGLGSHTEAVYGSCRAKLDAGGGGGSWDVSLARSVEALRQAKAVPTAKRLNPKQRLRLKKK 226
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A7S0UY38_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UY38_9CHLO) HSP 1 Score: 205 bits (521), Expect = 5.760e-55 Identity = 118/300 (39.33%), Postives = 160/300 (53.33%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAV--LGEAAGP-GGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKR--------------------GGVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAARLS*WQGEGQRRGSTEKQPAARLPIRVRWHFVVCWLRHVGN-GLVEVVRDEACD 1388
Y DHFET A RD L L K L K+ + L I+DPY+C G R +LGF KV + N+DFY + P +D+LITNPPYS DHK + L +C SGKPW LL+PNY+A K YY V L ++ P +PF++ P KY ++HPEGTGH SPF +W+VH GS T+AVF A R G VS++R+++EL + V T++R NP+ RK LK R +GEG +RG +++P R GN L++ +RD+ D
Sbjct: 152 YNDHFETSFDAIRDFSLVLEKLCKFLKKRPEKLIIYDPYFCMGNVKRHYTRLGFPKVINENRDFYADIAAGTIPAYDILITNPPYSEDHKTKILNFCIKSGKPWALLMPNYIANKKYYLDIVSNLPTSSSPVATKPFFLHPVEKYEYEHPEGTGHEQSPFDSLWFVHLGSLTDAVFSACKASMRLLRSTTPNSAPEPSTLPQSYGNVSMIRTIEELRESKHVPTDKRPNPKMRKKLKALRET---------EGEGMKRGGGQRKPEGE--------------RGKGNFSLMKRIRDDEDD 428
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A835SR82_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SR82_9CHLO) HSP 1 Score: 201 bits (510), Expect = 1.250e-54 Identity = 110/243 (45.27%), Postives = 138/243 (56.79%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAG--PGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVF-----------KGAFAEKRG--------------GVSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
Y DHFET A D++ L L K L K L I+DP++C G R GF H +DFY V + P +D+++TNPPYS DHK+R L++C SGKPW LL+PNYVATK YY A L EAAG P PFY+ P T+Y+++HPEGTGHA+SPF +WYV G HTEAV+ GA A V++ RS+D L V T +RLNP+QR LKKK
Sbjct: 101 YNDHFETSSAAVDDIQPVLTALCKRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVANGQLPAYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYY--AELIEAAGTPPQQRPFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGQHTEAVYGACRTRLDLSTSGAAAAASXXXXXXXXXXXXXGWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKK 341
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A835SNK2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SNK2_CHLIN) HSP 1 Score: 201 bits (510), Expect = 6.710e-54 Identity = 104/241 (43.15%), Postives = 135/241 (56.02%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGG-------------------------VSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
Y DHFET A D++ L L K L K L ++DP++C G R GF H +DFY V + P++D+++TNPPYS DHK+R L++C SGKPW LL+PNYVATK YY V P PFY+ P T+Y+++HPEGTGHA+SPF +WYV G+HTEAV+ GA K V++ RS+D L V T +RLNP+QR LKKK
Sbjct: 166 YNDHFETSAAAVDDIQPVLLALCKRLKKTPAQLAVYDPFFCQGGIRRHYTARGFTNFIHRKRDFYADVESGQLPEYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYYSELVDEAGTPPQQRPFYLTPVTRYAYEHPEGTGHAESPFYSIWYVGLGAHTEAVY-GACRTKLDSPGPAAAXXXXXXXXXXXXXXXXSWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKK 405
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A835Y0N0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0N0_9CHLO) HSP 1 Score: 203 bits (516), Expect = 1.500e-53 Identity = 105/258 (40.70%), Postives = 138/258 (53.49%), Query Frame = 3
Query: 561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRG----------------------------------GVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAAR 1232
Y DHFETP+QA RD++ L L L K L ++DP++C G R LG+ H +DFY V PK+DVL+TNPPYS DHK+R LE+C SGKPW LL+PNYVATK Y+ + + PF++ P T+Y ++HPEGTGHA+SPF +WYV G HTE VF+ A GV + R ++ L G V T RR NPRQR+ +K++ +A A R
Sbjct: 271 YNDHFETPIQAVRDLQPVLTALCGRLGKSPAQLAVYDPFFCQGGIRRHFEALGYTNFIHRKRDFYADVEAGNLPKYDVLVTNPPYSEDHKERILEFCLRSGKPWALLMPNYVATKAYFAELLDATSTPAPQRPFFLTPHTRYEYEHPEGTGHAESPFFSIWYVGLGPHTEPVFQACRARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWGVDLARGVEHLKAAGAVPTARRPNPRQRRKIKEQMAARAQRR 528 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.139.1 >prot_P-littoralis_Contig148.139.1 ID=prot_P-littoralis_Contig148.139.1|Name=mRNA_P-littoralis_Contig148.139.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=392bp MENGEREVRVGSDAKARLKKKNKKREKAIKVGGCISGIGTSSDLTRRPMTback to top mRNA from alignment at P-littoralis_Contig148:472115..474658+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.139.1 ID=mRNA_P-littoralis_Contig148.139.1|Name=mRNA_P-littoralis_Contig148.139.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2544bp|location=Sequence derived from alignment at P-littoralis_Contig148:472115..474658+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:472115..474658+ >mRNA_P-littoralis_Contig148.139.1 ID=mRNA_P-littoralis_Contig148.139.1|Name=mRNA_P-littoralis_Contig148.139.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1176bp|location=Sequence derived from alignment at P-littoralis_Contig148:472115..474658+ (Pylaiella littoralis U1_48)back to top |