mRNA_P-littoralis_Contig148.139.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig148.139.1
Unique NamemRNA_P-littoralis_Contig148.139.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: D7G7V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V7_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 3.270e-143
Identity = 221/310 (71.29%), Postives = 232/310 (74.84%), Query Frame = 3
Query:  333 PSVSGNKRPREGEEVGAAVQGGTSKSK---------HHPFPTECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGGVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAARL 1235
            PS  G KRPR G+  GAA      K +         HHPFPTE                                          YGDHFETPLQAYRD+E ALA+L+KLL KK+KHLRIWDPYYCAGRTPRLL QLGF KVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLG AAGPGGEPFYVVPE KY FDHPEGTGHADSPF+GVWYVHCGSHTEAVF+G   +KRGGVSVLRSLDELS+TG V+TERRLNPRQRKALKKKR AAAA  L
Sbjct:   68 PSDQGKKRPR-GDGAGAAAASLAGKKRPRESLAAPHHHPFPTE------------------------------------------YGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGPAAGPGGEPFYVVPENKYYFDHPEGTGHADSPFTGVWYVHCGSHTEAVFEGTITQKRGGVSVLRSLDELSQTGAVTTERRLNPRQRKALKKKRMAAAAELL 334          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A8J4APU4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4APU4_9CHLO)

HSP 1 Score: 215 bits (548), Expect = 5.990e-60
Identity = 108/234 (46.15%), Postives = 144/234 (61.54%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGE-PFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKR----------------GG---VSVLRSLDELSRTGTVSTERRLNPRQRKALK 1202
            Y DHFE+PLQA +D+E  L +LS  L K K  L ++DPY+C G   +   QLGF    H N+DFYK V     P +D+L+TNPPYS DHK+R LE+C  SGKPW LL+PNYVATK Y+   +L   + P  + PF++ P+ +YS++HPEGTGHA+SPF  +WY+  G +TE ++K   A                   GG   VSV R++D L +   V T RRLNP+QR  +K
Sbjct:  113 YNDHFESPLQAVQDIEPVLQLLSIKLKKSKSSLTVYDPYFCQGGIRQHYEQLGFKNFIHRNRDFYKDVDSGNVPSYDILVTNPPYSSDHKERILEFCLRSGKPWALLLPNYVATKAYFS-ELLDSVSTPAAQRPFFLTPQARYSYEHPEGTGHAESPFFSIWYIGLGEYTETIYKACKARLEPQSNGSSIQSEAAAGLGGRWRVSVARTVDALKQAKAVPTARRLNPKQRARMK 345          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A7S1IGA0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGA0_9EUGL)

HSP 1 Score: 211 bits (537), Expect = 7.150e-59
Identity = 103/215 (47.91%), Postives = 140/215 (65.12%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAE--KRGGVSVLRSLDELSRTGTVSTERRLNPRQRKAL 1199
            YGDHFET  QAY+D+   L   ++L+ +    L I+DP+YC G   R LA LGFH V H  +DFY  V+  + P+HD+LITNPPYSGDHK+R LEYC ASGKPW LL+PNY+ATK+YY+  +         EPFY V   +Y F HPEGTGH  SPF G W+++ G HTE +++ +     +    ++ R++D+L +   V   R +NP++RKAL
Sbjct:   97 YGDHFETCDQAYKDITPLLKEAARLMQRDASSLGIYDPFYCDGAVKRHLAALGFHTVHHEKRDFYADVKNGQVPEHDILITNPPYSGDHKERILEYCCASGKPWALLLPNYIATKNYYQSTLAKHKQ----EPFYFVSRERYMFYHPEGTGHDTSPFEGFWFLYLGPHTEHLYQWSVQNLPRSSYKALTRTVDDLLQKRLVPAPR-MNPKRRKAL 306          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A2J8ADG8_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ADG8_9CHLO)

HSP 1 Score: 213 bits (541), Expect = 8.860e-59
Identity = 109/240 (45.42%), Postives = 144/240 (60.00%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFK-------------GAFAEKRGG-----------VSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
            Y DHFET  +A +D+   L  LSK L K    L ++DP+YCAG      A LG  K  H N+DFY  V++   P +D+L+TNPPYSGDHK+R LE+C  SGKPW LL+PNYVATK Y+       +  P   PF++ P  +YS+DHPEGTGH +SPF  +WYV  G+HTE V+              GA  +++GG           V++ RS+D L +   V T +RLNP+QRK LK+K
Sbjct:  124 YNDHFETDFRAVQDILPVLQQLSKRLCKPLSELAVYDPFYCAGGVRAHYAALGITKFIHRNRDFYDDVKKGALPSYDILVTNPPYSGDHKERILEFCLRSGKPWCLLMPNYVATKAYFGQLQDAASTPPLQRPFFLTPHARYSYDHPEGTGHTESPFFSIWYVCLGAHTEGVYGSCRSRLDAAPAAGGAADQRQGGAPAGXXXAAWGVALARSVDALRQAKAVPTGKRLNPQQRKRLKQK 363          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A6U0XTY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XTY6_9STRA)

HSP 1 Score: 206 bits (523), Expect = 7.260e-58
Identity = 107/220 (48.64%), Postives = 140/220 (63.64%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYV--VPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGGVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRS 1214
            YGDHFETPL AY+ +   L  ++K L KK K LRI+DP+YCAG     +A LGF ++ H N+DFY+   E R P  DVL+TNPPYS DHK+R L +C  SGKPW LL+PNYVATK YY     G +  P   PF+V  +P ++Y + HPEGTGH +SPF  +W+V   +  + V  G  +   G   V+ S+ +L +   V   RRLNPRQRKA  K+R+
Sbjct:   15 YGDHFETPLIAYKHLRPVLCWIAKRLGKKPKELRIYDPFYCAGAVVGRMASLGFPRLIHRNEDFYRCESEGRVPAFDVLVTNPPYSLDHKERILNFCVTSGKPWALLMPNYVATKQYYTNLTSGGSGAPP-TPFFVAPLPGSRYQYTHPEGTGHDNSPFESMWFVDAMAGKKEVM-GELSPAEGS-RVMLSIADLKQARCVRPGRRLNPRQRKAAAKRRA 231          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A150GNL1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GNL1_GONPE)

HSP 1 Score: 201 bits (512), Expect = 2.200e-56
Identity = 98/210 (46.67%), Postives = 131/210 (62.38%), Query Frame = 3
Query:  600 DVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGG-------VSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
            D++  L  L K L K+   L ++DP++C G   +    LGF    H N+DFYK V     P +D+L+TNPPYS DHK+R L++C  SGKPW LL+PNYVATK Y+   +   A  P   PF++ P  +Y++DHPEGTGHA+SPF  +WYV  GSHTEAV+    A+   G       VS+ RS++ L +   V T +RLNP+QR  LKKK
Sbjct:   17 DLQPVLTALCKKLKKRPSQLVVYDPFFCKGGIRKHYEALGFTSFVHENRDFYKDVEAGALPDYDILVTNPPYSEDHKERILDFCLRSGKPWALLLPNYVATKAYFSSLLADTATPPPQRPFFLTPRVRYTYDHPEGTGHAESPFYSIWYVGLGSHTEAVYGSCRAKLDAGGGGGSWDVSLARSVEALRQAKAVPTAKRLNPKQRLRLKKK 226          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A7S0UY38_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UY38_9CHLO)

HSP 1 Score: 205 bits (521), Expect = 5.760e-55
Identity = 118/300 (39.33%), Postives = 160/300 (53.33%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAV--LGEAAGP-GGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKR--------------------GGVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAARLS*WQGEGQRRGSTEKQPAARLPIRVRWHFVVCWLRHVGN-GLVEVVRDEACD 1388
            Y DHFET   A RD    L  L K L K+ + L I+DPY+C G   R   +LGF KV + N+DFY  +     P +D+LITNPPYS DHK + L +C  SGKPW LL+PNY+A K YY   V  L  ++ P   +PF++ P  KY ++HPEGTGH  SPF  +W+VH GS T+AVF    A  R                    G VS++R+++EL  +  V T++R NP+ RK LK  R           +GEG +RG  +++P                 R  GN  L++ +RD+  D
Sbjct:  152 YNDHFETSFDAIRDFSLVLEKLCKFLKKRPEKLIIYDPYFCMGNVKRHYTRLGFPKVINENRDFYADIAAGTIPAYDILITNPPYSEDHKTKILNFCIKSGKPWALLMPNYIANKKYYLDIVSNLPTSSSPVATKPFFLHPVEKYEYEHPEGTGHEQSPFDSLWFVHLGSLTDAVFSACKASMRLLRSTTPNSAPEPSTLPQSYGNVSMIRTIEELRESKHVPTDKRPNPKMRKKLKALRET---------EGEGMKRGGGQRKPEGE--------------RGKGNFSLMKRIRDDEDD 428          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A835SR82_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SR82_9CHLO)

HSP 1 Score: 201 bits (510), Expect = 1.250e-54
Identity = 110/243 (45.27%), Postives = 138/243 (56.79%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAG--PGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVF-----------KGAFAEKRG--------------GVSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
            Y DHFET   A  D++  L  L K L K    L I+DP++C G   R     GF    H  +DFY  V   + P +D+++TNPPYS DHK+R L++C  SGKPW LL+PNYVATK YY  A L EAAG  P   PFY+ P T+Y+++HPEGTGHA+SPF  +WYV  G HTEAV+            GA A                   V++ RS+D L     V T +RLNP+QR  LKKK
Sbjct:  101 YNDHFETSSAAVDDIQPVLTALCKRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVANGQLPAYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYY--AELIEAAGTPPQQRPFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGQHTEAVYGACRTRLDLSTSGAAAAASXXXXXXXXXXXXXGWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKK 341          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A835SNK2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SNK2_CHLIN)

HSP 1 Score: 201 bits (510), Expect = 6.710e-54
Identity = 104/241 (43.15%), Postives = 135/241 (56.02%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGG-------------------------VSVLRSLDELSRTGTVSTERRLNPRQRKALKKK 1208
            Y DHFET   A  D++  L  L K L K    L ++DP++C G   R     GF    H  +DFY  V   + P++D+++TNPPYS DHK+R L++C  SGKPW LL+PNYVATK YY   V      P   PFY+ P T+Y+++HPEGTGHA+SPF  +WYV  G+HTEAV+ GA   K                            V++ RS+D L     V T +RLNP+QR  LKKK
Sbjct:  166 YNDHFETSAAAVDDIQPVLLALCKRLKKTPAQLAVYDPFFCQGGIRRHYTARGFTNFIHRKRDFYADVESGQLPEYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYYSELVDEAGTPPQQRPFYLTPVTRYAYEHPEGTGHAESPFYSIWYVGLGAHTEAVY-GACRTKLDSPGPAAAXXXXXXXXXXXXXXXXSWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKK 405          
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Match: A0A835Y0N0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0N0_9CHLO)

HSP 1 Score: 203 bits (516), Expect = 1.500e-53
Identity = 105/258 (40.70%), Postives = 138/258 (53.49%), Query Frame = 3
Query:  561 YGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRIWDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFYVVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRG----------------------------------GVSVLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAAR 1232
            Y DHFETP+QA RD++  L  L   L K    L ++DP++C G   R    LG+    H  +DFY  V     PK+DVL+TNPPYS DHK+R LE+C  SGKPW LL+PNYVATK Y+   +   +      PF++ P T+Y ++HPEGTGHA+SPF  +WYV  G HTE VF+   A                                      GV + R ++ L   G V T RR NPRQR+ +K++ +A A  R
Sbjct:  271 YNDHFETPIQAVRDLQPVLTALCGRLGKSPAQLAVYDPFFCQGGIRRHFEALGYTNFIHRKRDFYADVEAGNLPKYDVLVTNPPYSEDHKERILEFCLRSGKPWALLMPNYVATKAYFAELLDATSTPAPQRPFFLTPHTRYEYEHPEGTGHAESPFFSIWYVGLGPHTEPVFQACRARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWGVDLARGVEHLKAAGAVPTARRPNPRQRRKIKEQMAARAQRR 528          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V7_ECTSI3.270e-14371.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J4APU4_9CHLO5.990e-6046.15Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7S1IGA0_9EUGL7.150e-5947.91Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A2J8ADG8_9CHLO8.860e-5945.42Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
A0A6U0XTY6_9STRA7.260e-5848.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A150GNL1_GONPE2.200e-5646.67Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A7S0UY38_9CHLO5.760e-5539.33Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
A0A835SR82_9CHLO1.250e-5445.27Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835SNK2_CHLIN6.710e-5443.15Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A835Y0N0_9CHLO1.500e-5340.70Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:472115..474658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7V7
PFAMsKH_1
Model size2190
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.57e-148
EggNOG OGs2BVHF@1|root,2S29B@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-06_000150.1
Cds size1176
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789701.736801-UTR-P-littoralis_Contig148:472114..4721791680789701.736801-UTR-P-littoralis_Contig148:472114..472179Pylaiella littoralis U1_48UTRP-littoralis_Contig148 472115..472179 +
1680789701.7742217-UTR-P-littoralis_Contig148:473709..4746581680789701.7742217-UTR-P-littoralis_Contig148:473709..474658Pylaiella littoralis U1_48UTRP-littoralis_Contig148 473710..474658 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789701.753383-CDS-P-littoralis_Contig148:472179..4727911680789701.753383-CDS-P-littoralis_Contig148:472179..472791Pylaiella littoralis U1_48CDSP-littoralis_Contig148 472180..472791 +
1680789701.763844-CDS-P-littoralis_Contig148:473145..4737091680789701.763844-CDS-P-littoralis_Contig148:473145..473709Pylaiella littoralis U1_48CDSP-littoralis_Contig148 473146..473709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.139.1prot_P-littoralis_Contig148.139.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig148 472180..473709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig148.139.1

>prot_P-littoralis_Contig148.139.1 ID=prot_P-littoralis_Contig148.139.1|Name=mRNA_P-littoralis_Contig148.139.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=392bp
MENGEREVRVGSDAKARLKKKNKKREKAIKVGGCISGIGTSSDLTRRPMT
PTKEKAKCHTRMGEAAVGAAGAAGGKKVKGSEEGRAISLPSVSGNKRPRE
GEEVGAAVQGGTSKSKHHPFPTECGTSKSKHHPFPTEGGTSKSKHHPFPT
ECSTSKSKHHPFPTEYGDHFETPLQAYRDVEGALAVLSKLLSKKKKHLRI
WDPYYCAGRTPRLLAQLGFHKVEHSNQDFYKVVREKRQPKHDVLITNPPY
SGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGEAAGPGGEPFY
VVPETKYSFDHPEGTGHADSPFSGVWYVHCGSHTEAVFKGAFAEKRGGVS
VLRSLDELSRTGTVSTERRLNPRQRKALKKKRSAAAAARLS*
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mRNA from alignment at P-littoralis_Contig148:472115..474658+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig148.139.1 ID=mRNA_P-littoralis_Contig148.139.1|Name=mRNA_P-littoralis_Contig148.139.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2544bp|location=Sequence derived from alignment at P-littoralis_Contig148:472115..474658+ (Pylaiella littoralis U1_48)
AGCAGCTGGTGCTGCTATGTACGACACCAACAGGTGCTGTGGCTGACACT CGAAGAAAATTTGGCATGGAGAACGGTGAGAGAGAAGTAAGGGTTGGGTC GGATGCGAAAGCACGCCTGAAAAAGAAAAATAAGAAGCGTGAAAAGGCTA TCAAAGTGGGAGGCTGCATTTCTGGTATCGGCACATCGAGCGATCTTACA AGGCGGCCGATGACACCGACGAAGGAGAAAGCGAAATGCCACACTCGTAT GGGCGAGGCGGCCGTAGGAGCAGCGGGAGCAGCAGGCGGGAAAAAAGTAA AAGGGTCGGAAGAGGGGAGAGCAATATCGCTGCCCTCGGTATCAGGAAAT AAAAGACCGAGGGAAGGCGAAGAAGTGGGAGCCGCTGTTCAGGGCGGCAC GTCGAAGTCGAAGCACCACCCCTTCCCGACAGAGTGCGGCACGTCGAAGT CGAAGCACCACCCCTTCCCGACAGAGGGCGGCACGTCGAAGTCGAAGCAC CACCCCTTCCCGACAGAGTGCAGCACGTCGAAGTCGAAGCACCACCCCTT CCCGACAGAGTATGGTGATCATTTTGAAACGCCGCTACAAGCCTACAGAG ATGTCGAGGGGGCGTTGGCGGTCCTGTCCAAGCTACTCAGCAAGAAGAAG AAACATCTTCGAATATGGGATCCGTATGTGAGTCTTATCATTCCAACCGT TCAAACTCATGACTACAGCCAACTTCACCGAAGTAATCATGTGTCATTGG AAATGTGTGAAAGAGAACATACCTCAAGGGTGTGACGGGTACGAGAGAGG ATGCTGCTGGGCGACGAAAGCCGGCAATCAACAAACATTACCGCGGTGCA TTCTGGTACAATTTTCGCATCAATGCCAACCAGTCCCTGCAAAGCCCTCT CAATGACCAATCGCTCTGTGGACGGCGATTGCTGATTCAAAGGTCATACC TATGCCTCGCCCCCTCCCGTCACCCACCCCCTTCTTTTTTCACCTTGCAC CGGCCGGTATGATCGCACAACAACGTCACAGTACTGCGCCGGCCGCACAC CGCGCTTGTTAGCACAGCTGGGCTTCCACAAGGTGGAACACAGCAACCAA GACTTCTATAAAGTCGTCCGAGAGAAGCGGCAGCCCAAGCACGACGTCCT CATAACCAACCCTCCGTACAGCGGGGACCACAAGAAACGTTGCCTCGAGT ACTGCAGGGCCTCCGGCAAGCCCTGGTTCCTGCTGGTGCCCAACTACGTG GCAACCAAAGACTATTACCGACTTGCCGTGCTCGGGGAGGCGGCAGGACC TGGCGGGGAGCCGTTCTACGTGGTCCCGGAAACCAAGTACTCGTTCGATC ACCCAGAGGGCACGGGGCACGCGGACTCCCCCTTTTCCGGGGTGTGGTAC GTACACTGCGGGAGTCACACGGAGGCTGTGTTCAAGGGCGCTTTTGCAGA GAAGAGGGGGGGTGTTTCTGTCCTGCGGTCTCTAGACGAACTGAGCCGAA CGGGAACCGTGAGCACGGAGCGCAGACTGAACCCGCGGCAACGAAAGGCG CTCAAGAAGAAGCGGAGCGCTGCGGCGGCTGCAAGACTTTCGTAGTGGCA GGGGGAGGGCCAGAGACGAGGCAGCACTGAAAAGCAGCCAGCAGCCCGTC TTCCAATCCGAGTGCGTTGGCATTTTGTAGTGTGCTGGCTGCGACATGTT GGCAATGGGCTCGTTGAGGTGGTCAGAGATGAAGCCTGCGATCTGCCGTA CCGTGACAGTGTTACTATTTGTCCACCTATTTAGTATAGATATTGGTATC ATTCACCTTTTGCTGGCCATGTGTGTGTTGTGCATGCTGCGTATCTCATC ACAGCCCAGGCAGGCTGATACAACACTCCAAAAATTGTTCTCATTTTTTT CGAAAACAAACGATCTGGACTCGGACGAAGCCCTCCGGAAAACGACTTGT CGTAATAGATAATATTATGTGAATGTGATCCGAACGGTGTTGTCCAACAG AAGCCACGACGGGTACAGCAGTTGAGCATCTTGGAGTTGATGTAATGGGG GAAATATGACTCGATGAGGTTTCATGTTGACTTCAGGATTACTCTGGAAT TGAACATTAAACGAAATTGTTTCCGACTTCGCCCGAACAACTCCGCCAGG TGCTCGCTATTTTGCACCACTCTTGTTTTGTTTGTTAGACGCTACAGATG TCCTGTGCGCTCGGCGCTGTGGATGAGGTGCGCGAGTGGGTTCCACTTTT TTCTCTTGGTTCGCGCGTCTCGGCGACACGTTTGAGTAATGACGCAACAC GCGTGGCACGAGAATGTTCGCTCTACTGGTGCACTATTGACCATTGTTGC TGTGGGGTAGTGCCGTTGCCTACTGTACGAACAACTTTGTGTCGATGTAG GTGATTGTTTCAGATTGTTGGTATTTGTTGGTATTAGTTCGACTTAAGCA TACCCTTCATGTATTTGCACTTTCACCAGTAATGTACAGCTGTTTCTGTC GTGACACATGTTGCTGCTTGATGGAATACCGCGAACACGAAAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig148:472115..474658+

>mRNA_P-littoralis_Contig148.139.1 ID=mRNA_P-littoralis_Contig148.139.1|Name=mRNA_P-littoralis_Contig148.139.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1176bp|location=Sequence derived from alignment at P-littoralis_Contig148:472115..474658+ (Pylaiella littoralis U1_48)
ATGGAGAACGGTGAGAGAGAAGTAAGGGTTGGGTCGGATGCGAAAGCACG
CCTGAAAAAGAAAAATAAGAAGCGTGAAAAGGCTATCAAAGTGGGAGGCT
GCATTTCTGGTATCGGCACATCGAGCGATCTTACAAGGCGGCCGATGACA
CCGACGAAGGAGAAAGCGAAATGCCACACTCGTATGGGCGAGGCGGCCGT
AGGAGCAGCGGGAGCAGCAGGCGGGAAAAAAGTAAAAGGGTCGGAAGAGG
GGAGAGCAATATCGCTGCCCTCGGTATCAGGAAATAAAAGACCGAGGGAA
GGCGAAGAAGTGGGAGCCGCTGTTCAGGGCGGCACGTCGAAGTCGAAGCA
CCACCCCTTCCCGACAGAGTGCGGCACGTCGAAGTCGAAGCACCACCCCT
TCCCGACAGAGGGCGGCACGTCGAAGTCGAAGCACCACCCCTTCCCGACA
GAGTGCAGCACGTCGAAGTCGAAGCACCACCCCTTCCCGACAGAGTATGG
TGATCATTTTGAAACGCCGCTACAAGCCTACAGAGATGTCGAGGGGGCGT
TGGCGGTCCTGTCCAAGCTACTCAGCAAGAAGAAGAAACATCTTCGAATA
TGGGATCCGTATTACTGCGCCGGCCGCACACCGCGCTTGTTAGCACAGCT
GGGCTTCCACAAGGTGGAACACAGCAACCAAGACTTCTATAAAGTCGTCC
GAGAGAAGCGGCAGCCCAAGCACGACGTCCTCATAACCAACCCTCCGTAC
AGCGGGGACCACAAGAAACGTTGCCTCGAGTACTGCAGGGCCTCCGGCAA
GCCCTGGTTCCTGCTGGTGCCCAACTACGTGGCAACCAAAGACTATTACC
GACTTGCCGTGCTCGGGGAGGCGGCAGGACCTGGCGGGGAGCCGTTCTAC
GTGGTCCCGGAAACCAAGTACTCGTTCGATCACCCAGAGGGCACGGGGCA
CGCGGACTCCCCCTTTTCCGGGGTGTGGTACGTACACTGCGGGAGTCACA
CGGAGGCTGTGTTCAAGGGCGCTTTTGCAGAGAAGAGGGGGGGTGTTTCT
GTCCTGCGGTCTCTAGACGAACTGAGCCGAACGGGAACCGTGAGCACGGA
GCGCAGACTGAACCCGCGGCAACGAAAGGCGCTCAAGAAGAAGCGGAGCG
CTGCGGCGGCTGCAAGACTTTCGTAG
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