mRNA_P-littoralis_Contig148.127.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: D7G7V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V4_ECTSI) HSP 1 Score: 332 bits (851), Expect = 1.660e-107 Identity = 170/201 (84.58%), Postives = 182/201 (90.55%), Query Frame = 1
Query: 541 VSSPCPSQAQAMCPEETWGVISRLTTALVRELEPERLAEVERGLADMASRVTGTTDLEMVVPGLIRLLGGDSKALSALKMVDQGVVLLGVHHMKGSVTRGLLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 1143
V P P+QAQ PEETW +I+RLT+ LV ELEPER+AEVERGLA +A RVTGTTDLEMVVP LI LLGGD KAL ALKMVDQGVVLLGVHHMKG VTRGL+TKDVRSA GWQIGMDVFEQYVQVYHKRREQSVDDM+S + DGA+NHFELDFEVRATFDREMT+LTAAGLRVQRLVCSPTMQPEMRVQLESRILGD+IIL
Sbjct: 14 VLPPAPTQAQG--PEETWALIARLTSTLVHELEPERMAEVERGLASIADRVTGTTDLEMVVPELIHLLGGDGKALRALKMVDQGVVLLGVHHMKGGVTRGLVTKDVRSASGWQIGMDVFEQYVQVYHKRREQSVDDMYSQTVDGADNHFELDFEVRATFDREMTQLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDLIIL 212
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A6H5L330_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L330_9PHAE) HSP 1 Score: 318 bits (815), Expect = 4.270e-102 Identity = 165/191 (86.39%), Postives = 176/191 (92.15%), Query Frame = 1
Query: 571 AMCPEETWGVISRLTTALVRELEPERLAEVERGLADMASRVTGTTDLEMVVPGLIRLLGGDSKALSALKMVDQGVVLLGVHHMKGSVTRGLLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 1143
A PEETW +I+RLT+ LV ELEPE++AEVERGLA +A+RVTGTTDLEMVVP LI LLGGDSKAL ALKMVDQ VVLLGVHHMKG VTRGL+TKDVRSA GWQIGMDVFEQYVQVYHKRREQSVDDM S + DGA+NHFELDFEVRATFDREMT+LTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL
Sbjct: 24 AQGPEETWALITRLTSTLVHELEPEKMAEVERGLASIAARVTGTTDLEMVVPELIDLLGGDSKALRALKMVDQRVVLLGVHHMKGGVTRGLVTKDVRSASGWQIGMDVFEQYVQVYHKRREQSVDDM-SQTVDGADNHFELDFEVRATFDREMTQLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 213
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A7S2SSQ3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSQ3_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.340e-27 Identity = 89/235 (37.87%), Postives = 131/235 (55.74%), Query Frame = 1
Query: 439 VRRIWQRPATEGSLSKDLPRLARRVTVRTRRDGGVSSP--CPSQAQAMCPEETWGVISRLTTALVRELEPERLAEVERGLADMASRVTGTTDLEMVVPGLIRLLGGD-SKALSALKMVDQGVVLLGVHHMKGSVTRG--LLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILG 1128
+R + P TE SL+KDLPRLA R+ + +SP C + EE + ++ + L L+P++ EVE R+ D ++ L+ LGGD S + ALK+V QGVVL + ++ G +LTKDVRS DGW++ +DV +Q Q+ H R+EQS+D MF +T HFE +FEV AT D ++ +TAA LRV + TM+P+ R +L+ +ILG
Sbjct: 10 LRPAFLAPFTETSLAKDLPRLASRIAI--------TSPTLCLDARGSGGEEERTSRVFQVVSLLSAVLQPDQCTEVEELCHAYDQRLAEGADPQIACTELLGALGGDESPVVRALKLVRQGVVLGAMELLRSQAPEGVDILTKDVRSVDGWRVYIDV-QQAFQIRHVRKEQSLD-MFGDATQ----HFEYEFEVSATLDSALSGVTAAWLRVLHAEYAETMKPDRRAELQ-QILG 229
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A2R5GCW9_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCW9_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.440e-23 Identity = 69/184 (37.50%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 598 VISRLTTALVRELEPER--LAEVERGLADMASRVTGTTDLEMVVPGLIRLLGGDSKALSALKMVDQGVVLLGVHHMKGSVTRGLLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 1143
+I L L+ LEP+ A V + ++ + VT +DL++VV +I +G DSK LK + Q VVL +K +T TKDVRS+DGW+I + + + + QV H RREQS+D S NH+E ++E+R TFD++M +TAA LRV RL+ S TM + +L++ ++ +I++
Sbjct: 294 LIVDLIVVLLAYLEPDEDVQAAVIEEVREIQASVTEASDLQLVVRQIIEAVGVDSKVTKVLKCIHQNVVLQSTVAIKEKLTMQFPTKDVRSSDGWRITITLSKGFAQVRHTRREQSID-----SFGNIENHWEFEWELRMTFDQQMQNMTAAQLRVTRLMLSETMDVGLAARLKATLVDGLIVM 472
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A7S2DNQ4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNQ4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.470e-18 Identity = 73/230 (31.74%), Postives = 113/230 (49.13%), Query Frame = 1
Query: 466 TEGSLSKDLPRLARRVTVRTRRDGGVSSPCPSQAQAMCPEETWGVISRLTTALVRELEPERLAEVERGLADMA-SRVTGTTDLEMVVPGLIRLLGGDSKAL-SALKMVDQGVVLL--GVHHMKGSVTRGLLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 1143
TE + ++ + A+ + ++ + + ++ P + + ++ AL L+P R E+ A M S+V D +M ++ LG D L LK QGVVL G K + L+TKDVRSADGWQ+ + V + V + H RREQS+D A+NHFE FEV TFD ++ ++ A LR+ L + TM+ E+R L S ++IL
Sbjct: 139 TESTAARPVGAEAKMSAIESQAEEAGGAGYNNEESTRVPAQPPSDVHQVVRALTAILDPTR-KELNLEAARMYDSQVQSGMDPQMACADMVNALGADDSPLVRLLKFTTQGVVLAAKGAILDKIGTEQHLMTKDVRSADGWQVAITVIDSVVMIRHVRREQSLD-----LWGDASNHFEYTFEVACTFDTKLERIFATDLRILDLTLADTMESELRRTLTSAFTTGLLIL 362
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A7S3V399_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V399_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.860e-18 Identity = 74/226 (32.74%), Postives = 119/226 (52.65%), Query Frame = 1
Query: 439 VRRIWQRPATEGSLSKDLPRLARRVTVRTRRDGG---VSSPCPSQAQAMCP---EETWGVISRLTTALVRELEPERLAE-VERGLADMASRVTGTTDLEMVVPGLIRLLGGDSKALSALKMVDQGVVLLGVHHMKGSVTRGLLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPE 1095
++ ++ R S KDL RL R+++ R G V +P S+ A E ++S L+T L++ E + +AE R L ++ R G + +V ++ L+G DS++ LK ++Q +VL G MK ++T+ + TKDVR DGW I + + E +VQV H R+E + + +N +++++EVR TFDR M LTAA LR+ L M E
Sbjct: 79 MKSVFDRNIETLSTYKDLGRLISRLSLLLRIPGQGDVVLNPIKSERTAGLSGGEAEIVAIVSLLST-LLKFFEEKHIAESFVRQLKEVRERY-GEVENRHLVKEMVALIGTDSRSARVLKCINQSIVLQGTFEMKSTLTKTVTTKDVREEDGWLIVVTLAE-FVQVKHTRKEHCT----YATRNEPHNRWDIEWEVRLTFDRNMEDLTAAQLRITNLHLGDAMDEE 297
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A7S4DYT7_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DYT7_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 8.490e-9 Identity = 65/244 (26.64%), Postives = 112/244 (45.90%), Query Frame = 1
Query: 421 EAFTTGVRRIWQRPATEGSLSKDLPRLARRVTVRTRRDGGVSSPCPSQAQAMCPEETWGVISRLTTALVRELEP-ERLAEVERGLADMASRVTGTTDLEMVVPGLIRL----LGGDSKALSALKMVDQGVVLLGVHHMKGSVTRGLLT--KDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILGD 1131
+ F W+ T + KDLPRL RR+ V T + GV ++ + W + + + +E E LA++E+ L D D + P L + LG DSK + K V Q +++ + + +V + L KDV+ +GW+I + + E V V H R EQS+ HS HFE ++ +R +FD+ M L A +R+ + +P M +++ + + + G+
Sbjct: 291 DVFVEQFAATWKSARTV--VYKDLPRLVRRIRVHTPK--GVQFEGSDDSK-----DLWETVCSVIVVVATAMETKETLAKLEKALKDQ-----NVQDTAEIFPSLRSIFEDTLGLDSKTMKVFKTVHQSILVPAMVKLADTVFKPLQQNFKDVKRREGWKIQIHLGEA-VYVIHNRIEQSL-----HSRQDPQ-HFECEWTLRLSFDKNMEDLRAVFVRIVDVNTNPNMPKDLQDTVITALKGE 513
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: L8GWR0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWR0_ACACA) HSP 1 Score: 66.2 bits (160), Expect = 8.430e-8 Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 1
Query: 601 ISRLTTALVRELEPERLAEVERGLADMASR--VTGTTDLEMVVPGLIRLLGGDSKALSALKMVDQGVVLLGVHHMKGSVTRGLLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGAN-----NHFELDFEVRATFDREMTKLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMI 1137
+S L + LEP A + D + T D+ M++ +++ G + S LK + QGV+L +K VT+ +LTKDVR+ DGW++ + + V H RRE S+ GA N F ++ + F+ +T+L A LR+ L P E + +L +
Sbjct: 256 LSSLVCRIAEALEPRETALQVKNSFDFYKKNGTAETMDMGMIMQAILKN-GVGPRTESILKAIHQGVILTTAFEIKHKVTKSILTKDVRTKDGWRVHVHLAPNGAVVTHTRREMSI---------GARGPEPENEFVFEWRLSMFFNAALTELEAVKLRLTDLQFGPQTTAENKQKLNQTFFNGQL 431
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Match: A0A7S0MTD2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MTD2_9CRYP) HSP 1 Score: 53.9 bits (128), Expect = 7.180e-5 Identity = 37/126 (29.37%), Postives = 59/126 (46.83%), Query Frame = 1
Query: 706 DLEMVVPGLIRLLGGDSKALSALKMVDQGVVLLGVHHMKGSVTRG--------LLTKDVRSADGWQIGMDVFEQYVQVYHKRREQSVDDMFSHSTDGANNHFELDFEVRATFDREMTKLTAAGLRV 1059
DLE + L L + K+++Q + + +K S L+TKDVRSADGW+I +D+ + + V H RREQS+ S + + + + + + F R+M LT L V
Sbjct: 18 DLEPYIRELFSSLDETGPTIRVFKLINQAALAAAITPLKLSAASRSANLRADMLMTKDVRSADGWRISIDIGDHEICVTHIRREQSL------SGEASPEGWSMTWRLAIFFPRDMADLTRTTLEV 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.127.1 >prot_P-littoralis_Contig148.127.1 ID=prot_P-littoralis_Contig148.127.1|Name=mRNA_P-littoralis_Contig148.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=289bp MNATSIGYQDGRAGVAAGLCGRWPWGSSAADDVDGSRWANPGSEDESEAFback to top mRNA from alignment at P-littoralis_Contig148:450342..459490+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.127.1 ID=mRNA_P-littoralis_Contig148.127.1|Name=mRNA_P-littoralis_Contig148.127.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9149bp|location=Sequence derived from alignment at P-littoralis_Contig148:450342..459490+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:450342..459490+ >mRNA_P-littoralis_Contig148.127.1 ID=mRNA_P-littoralis_Contig148.127.1|Name=mRNA_P-littoralis_Contig148.127.1|organism=Pylaiella littoralis U1_48|type=CDS|length=867bp|location=Sequence derived from alignment at P-littoralis_Contig148:450342..459490+ (Pylaiella littoralis U1_48)back to top |