prot_P-littoralis_Contig148.54.1 (polypeptide) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI) HSP 1 Score: 151 bits (382), Expect = 5.730e-42 Identity = 87/121 (71.90%), Postives = 97/121 (80.17%), Query Frame = 0
Query: 6 AVTLIASSSAFVAPMAVRSVAPASSSSSLKIQTTGSAYIATLPHAPFSR-QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEF 125
A TLIASS+AFVAPMAVRS APASSSS+LK+ + GS Y+ATLP APF +IF LSDGADP DIKKW EIKH RVAM ASLGVLVAE+YH +G D IGPAVDHFQEISA++PEF
Sbjct: 11 AATLIASSTAFVAPMAVRSAAPASSSSALKM-SAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEF 130
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI) HSP 1 Score: 143 bits (361), Expect = 8.250e-39 Identity = 83/126 (65.87%), Postives = 98/126 (77.78%), Query Frame = 0
Query: 1 MLHSTAVTLIASSSAFVAPMAVRSVAPASSSSSLKIQTTGSAYIATLPHAPFSR-QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEF 125
M TA TLIASS+AFVAPMAVRS APASS+S+LK+ + GS Y+ATLP APF +IF LSDGA+P +IK W EIKH RVAM A++GV+VAE+YH +G D IGPAVDHFQEISA+FPEF
Sbjct: 7 MFLGTAATLIASSTAFVAPMAVRSAAPASSASALKM-SAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEF 131
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI) HSP 1 Score: 143 bits (360), Expect = 1.260e-38 Identity = 84/126 (66.67%), Postives = 97/126 (76.98%), Query Frame = 0
Query: 1 MLHSTAVTLIASSSAFVAPMAVRSVAPASSSSSLKIQTTGSAYIATLPHAPFSR-QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEF 125
M TA LIASS+AFVAP+AVRS APAS++S+LK+ + GS Y+ATLP APFS +IF LSDGA P DIKKW EIKH RVAM ASLG+LVAEEYH +G D IGPA+ HFQEISA+FPEF
Sbjct: 6 MFLGTAAALIASSTAFVAPVAVRSAAPASAASALKM-SAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEF 130
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI) HSP 1 Score: 135 bits (341), Expect = 7.400e-36 Identity = 78/125 (62.40%), Postives = 97/125 (77.60%), Query Frame = 0
Query: 1 MLHSTAVTLIASSSAFVAPMAVRSVAPASSSSSLKIQTTGSAYIATLPHAPFSRQIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEF 125
M TA TLIASS+AFV PMAVRS APASS+S+LK+ + G+ Y+ATLP A + +IF L+DGADP +IK W EIKH RVAM A++GV+VAE+YH F +G D IGPAVDHFQEI+A+FP+F
Sbjct: 7 MFLGTAATLIASSAAFVTPMAVRSAAPASSASALKM-SAGTDYLATLPGA--NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQF 128
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI) HSP 1 Score: 102 bits (254), Expect = 3.370e-23 Identity = 52/71 (73.24%), Postives = 56/71 (78.87%), Query Frame = 0
Query: 55 QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEF 125
QIF LSDGA P DIKKW EIKH RVAM ASLGV+VAE+YH F +G D IGPAVDHFQEISA+FPEF
Sbjct: 36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEF 106
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI) HSP 1 Score: 101 bits (252), Expect = 4.230e-23 Identity = 57/95 (60.00%), Postives = 65/95 (68.42%), Query Frame = 0
Query: 39 TGSAYIATLPHAPFSRQIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEFRTSFLISI 133
T S Y+ T P +IF L+DGA+ DIK W EIKH RVAM ASLGVLVAEEYH F +G D IGPAVDHFQEISARFPEF L+++
Sbjct: 2 TSSLYVGTRSLLP---KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLAL 93
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.660e-22 Identity = 67/106 (63.21%), Postives = 75/106 (70.75%), Query Frame = 0
Query: 1 MLHSTAVTLIASSSAFVAPMAVRSVAPASSSSSLKIQTTGSAYIATLPHAPFSR-QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGL 105
M TA TLIASS+AFVAPMAVRSV SS LK+ + GS Y+ATLP APFS +IF LSDGA P DIKKW EIKH RVAM ASLGV+VAE + LLG+
Sbjct: 6 MFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKM-SAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEFWAFSLLGM 110
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.750e-22 Identity = 62/125 (49.60%), Postives = 82/125 (65.60%), Query Frame = 0
Query: 11 ASSSAFVAPMAVR-SVAPASSSSSLKIQTTGSAYIATLPHAPFSR-QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEFRTSFLISI 133
AS AF+ P S P S+++ + + GS Y++TLP APF+ +++ LS ADP DIKKW EIKH RVAM AS+GVLVAE +H LG D IGPA+ HF+EI+ARFP+F L++I
Sbjct: 68 ASCEAFIVPTPTTLSARPTSTAARM---SAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAI 189
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: A0A6H5JYI8_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI8_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.720e-22 Identity = 68/110 (61.82%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 1 MLHSTAVTLIASSSAFVAPMAVRSVAPASSSSSLKIQTTGSAYIATLPHAPFSR-QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEE-YHTFLLGLDDI 108
M TA TLIASS+AFV PMA+RSVA SSS K+ + GS Y+ATLP APFS +IF LSDGA P DIKKW EIKH RVAM ASLGV+VAEE Y LG D +
Sbjct: 6 MFIGTAATLIASSTAFVGPMAMRSVASTPSSSGFKM-SAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEEDYMPGDLGFDPL 114
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.060e-21 Identity = 52/71 (73.24%), Postives = 56/71 (78.87%), Query Frame = 0
Query: 55 QIFGTPRLSDGADPIDIKKWLGTEIKHKRVAMPASLGVLVAEEYHTFLLGLDDIGPAVDHFQEISARFPEF 125
QIF LSDGA P DIKKW EIKH RVAM ASLGV+VAE+YH F +G D IGPAVDHFQEISA+FPEF
Sbjct: 232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEF 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig148.54.1 ID=prot_P-littoralis_Contig148.54.1|Name=mRNA_P-littoralis_Contig148.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=246bpback to top |