mRNA_P-littoralis_Contig148.50.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A6H5KD56_9PHAE (SufE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE) HSP 1 Score: 414 bits (1065), Expect = 1.100e-135 Identity = 243/324 (75.00%), Postives = 267/324 (82.41%), Query Frame = 1
Query: 64 MIARAALLLAALATSVCSVGQAFVTSNVAVGSAAGGSFSDRAAAVAAPTXXXXXXXXXXAAESARPRRTSLLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGLIYYYTDSNAMITKGLASLL-AMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAALEDATPAEEPVK-EEPKESGAITARIVEKLQALEPLQLEIVDDSGGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKIVHAVTLVTKTPEEAGM 1029
M+ARAA+L AL+TSVCSVG++FVT NVAV GG+FS AA AA + XXXXX R + LMSTSTDLK+LGLTPELER+TK+FR CPTDKMRQMQLLHL QMGDKMDP LQTE+NKVLGCLSTVYVAAE+KDGLIYY TDS+AMITKG A LL AMGLSGN PEAIQ VKPEFIQVAGLQASL AGRNNGFINML+TMKGKALALGGESA+RAA+E A PA E EE +ESG + +R+ EKLQ LEPL+L I D+SGGEESK I IVSKSFEG+ LKRHRSVYGLMADEMKIVHAVTL TKTPEEAGM
Sbjct: 1 MVARAAILSVALSTSVCSVGESFVTPNVAV--VPGGAFSSHRAAQAARSRRPAAXXXXXXRSG---RDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A836CLM4_9STRA (Cysteine desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA) HSP 1 Score: 224 bits (571), Expect = 4.260e-63 Identity = 137/276 (49.64%), Postives = 172/276 (62.32%), Query Frame = 1
Query: 250 SARPRRTSLLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGLIYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAAL----------------EDATPAEEPVKEEPKESGAITARIVEKLQALEPLQLEIVDDSGGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKIVHAVTLVTKTPEEAGM 1029
SAR R LLMST+ ++ELGLT ELER+ K FR P DKMR QLL +A G ++ + +T NKV GCLSTV+V A++K G +Y+ DS+A +TKGL S+L GLSGN IQ VKPEFIQVAGLQ SLT GRNNGFINML TMK KAL +D AE P K +T I+ KLQAL P++L++ D+S +E K I++VS +FEG+ +KRH+ V+ +ADEMK VHAV L TKTP E G+
Sbjct: 51 SARRRAAPLLMSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGK-------PMTTAIMRKLQALRPVRLQVEDESE-DEQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: M2XAG5_GALSU (Cysteine desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU) HSP 1 Score: 176 bits (446), Expect = 1.660e-45 Identity = 115/268 (42.91%), Postives = 156/268 (58.21%), Query Frame = 1
Query: 274 LLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGLIYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALA----LGGESALRAALEDATPAEE--PVKEEPKESGAITARIVEKLQALEPLQLEIVDDS------------GGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKI-VHAVTLVTKTPEE 1020
L + D K+LGLTPEL R+ K F P K+R QLL+LAQ + + +T +NKV GCLSTV+V + + I++ DS+A +TKGL +LL GL+G E I+R+ PEF+ VAGL SLT GRNNGF+NML+TMK KA L G S D P + P E SG I + IVEKLQ L+P +LE+ DDS E+ ++ +VS +F G+ +KRH+ VY L+ E+K +HA+ + KTP E
Sbjct: 57 LQIRCQVDEKKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETA-SGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSE 323
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A7S1T9Y1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9Y1_9RHOD) HSP 1 Score: 174 bits (442), Expect = 2.620e-45 Identity = 113/255 (44.31%), Postives = 149/255 (58.43%), Query Frame = 1
Query: 295 DLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELK-DGLIYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAALEDATPAEEPVKEE--PKESGAITARIVEKLQALEPLQLEIVDDS-----------GGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKI-VHAVTLVTKTP 1014
+L LGLTPELER+T+ F P KMR QLL +AQ MD L T +NKV GCLSTVYV A DG ++ DS+A +TKGL +LL GL G E I+RV PEFIQ +GL SLT GRNNGF+NML +K KA A + + +E + +PV E P ++G I RI +KL L+P +L I D S E+ +I I S +FE + ++RHR +Y L+A E+ VHA+ + +TP
Sbjct: 46 ELDALGLTPELERLTRQFSMVPDPKMRYQQLLFMAQELPSMDTSLMTSENKVPGCLSTVYVHASRNGDGTVHLVGDSDAQLTKGLIALLIQGLDGKTVEEIERVSPEFIQASGLAVSLTPGRNNGFLNMLAKIKAKARA-----CIDSPVEVLSATPDPVVERNIPPDAGPIYRRIAQKLSVLKPTELVISDKSKQHSGHPGNLQAKTETHFSIRIRSTAFEPLTPVQRHRVIYTLLAQELNDGVHALQIDAQTP 295
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A7S2ZLB0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD) HSP 1 Score: 167 bits (423), Expect = 8.630e-43 Identity = 109/269 (40.52%), Postives = 152/269 (56.51%), Query Frame = 1
Query: 256 RPRRTSLLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGL--IYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAALEDATPAEEPVKEEPKESGAITARIVEKLQALEPLQLEIVDDS--------GGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKI----VHAVTLVTKTPEE 1020
R R +++ + ++ L LTP LE+M + P K+R QLLH A M+P+L+TE NKV GCLSTV+V AE+ +Y+ DS+A +TKGL S+L GLSG+ I++V P+FI+ +GL SLT GRNNGFINMLK MK KA L E+A E+ V+ E TA I L L P++LE+ D S G+E+ + I +VS++FE M + RH+ +Y L+ M VHA+ + TK P E
Sbjct: 23 RKRLGTIMTAADVEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVPGKPRATA-IGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAPGE 290
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A7S3Q629_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.220e-41 Identity = 103/274 (37.59%), Postives = 156/274 (56.93%), Query Frame = 1
Query: 274 LLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDG-----LIYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALAL-------GGESALRAALEDATPAEEPVKEEPKESGAITARIVEKLQALEPLQLEIVDDSGGE-------------ESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKIVHAVTLVTKTPEE 1020
L M+ +++++ LGLTPELE+MTK F P +K+R QLL++A +DP L +NKV GCLSTVYV +D ++ + DS+ +TKGL +LL G+SG E IQ+V PEFI A + SLT GRNNGF+NML MK KA + GGE A A E + + + +P + ++E L L+P+ LE++DDS ES +++V++ F+GM +KRH+ +Y ++ + M +HA+++ K P +
Sbjct: 48 LSMADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYSVGADNSGGEEA-DADTEGVISSFDEIAGKPMYND-----MMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQ 315
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A4D9DCV6_9STRA (SufE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.290e-41 Identity = 106/267 (39.70%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 262 RRTSLLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGLIYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAALEDATPAEEPVKEEPKESGAITARIVEKL-QALEPLQLEIVDDSG-----------GEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKIVHAVTLVTKTPEEAG 1026
+ T+ + ST D LGLTP L +++ F+ ++ R LL LA M + +NKV GCLSTVYV A ++DG +Y+ DS+A +TKGL +LL G+SG E IQ VKPEFI+ AG+ ASLT GRNNGF+NML +K KA+ + E A +E + + + + ++KL L+P +LE+ DDS G ES ++ IV+ FEG+ ++RH+ VY ++A EM+ +HA+++ KTP EAG
Sbjct: 51 KTTTYMSSTDIDESSLGLTPRLFEVSRAFQ-LMDERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGAGQEEPAVEFQEDI------ARPVYSSCMKKLINFLKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A1Z5K9T0_FISSO (SufE domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO) HSP 1 Score: 157 bits (397), Expect = 1.720e-39 Identity = 109/260 (41.92%), Postives = 144/260 (55.38%), Query Frame = 1
Query: 286 TSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYV---AAELKDGLIY--YYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAALEDATPAEEPVKEEPKESGAITARIVEKLQALEPLQLEIVD----------DSGGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKIVHAVTLVTKTPEE 1020
T TD + LTPEL ++ F DK+R QLL++A +DP +NKV GCLSTVYV A + DG+I + DS+ ++TKGL +LL GLSGN E IQ V P FIQ G+ ASLT GRNNGF+NML MK KA L A + P+E E A IV+ LQAL+P+ L++ D S E+ + IV+ +FEG+ +KRH+ VY L+ D M +HA+ + KTPEE
Sbjct: 16 THTD-NPMRLTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKA------KQLEANYQATGPSESATTTAGDEKPMYQA-IVQGLQALKPVSLKLEDVSYQHAGHREASKDGETHFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEE 267
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A7S0BG18_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BG18_9RHOD) HSP 1 Score: 156 bits (395), Expect = 5.490e-39 Identity = 108/270 (40.00%), Postives = 149/270 (55.19%), Query Frame = 1
Query: 256 RPRRTSLLMSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGL--IYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESA-LRAALEDATPAEEPVKEEPKESGAITARIVEKLQALEPLQLEIVDDS--------GGEESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKI----VHAVTLVTKTPEE 1020
R R ++L + ++ L LTP LE+M + P K+R QLLH A M+P+L+TE NKV GCLSTV+V A + +Y+ DS+A +TKGL S+L GLSG+ IQ+V PEFI+ +GL SLT GRNNGF+NMLK MK KA L E+A L + T + E P + A I L L P +LE+ D S G+E+ + I +VS +F+ M + RH+ +Y L+ M VHA+ + K P E
Sbjct: 23 RKRTGTVLTAADVEMSSLNLTPALEKMVSSLKIFPDSKVRYQQLLHYATTLGPMEPELKTEANKVPGCLSTVFVHAVINPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIQKVNPEFIKSSGLTVSLTPGRNNGFMNMLKLMKHKAELLDEEAAGLGPGSKGQTDGDAVEFEVPGKPRATA--IGRALMQLNPTELEVEDFSESHKGHAHAGDETHIRIKVVSDAFQDMSLVLRHKVIYKLLDSFMDKGDGGVHALQIDAKAPAE 290
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Match: A0A7S2NSI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSI8_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.760e-39 Identity = 101/265 (38.11%), Postives = 149/265 (56.23%), Query Frame = 1
Query: 280 MSTSTDLKELGLTPELERMTKMFRKCPTDKMRQMQLLHLAQMGDKMDPDLQTEKNKVLGCLSTVYVAAELKDGL----IYYYTDSNAMITKGLASLLAMGLSGNPPEAIQRVKPEFIQVAGLQASLTAGRNNGFINMLKTMKGKALALGGESALRAALEDATPAEEPVK---EEPKESGAITARIVEKLQALEPLQLEIVDDS-------GGE----ESKLTISIVSKSFEGMMSLKRHRSVYGLMADEMKIVHAVTLVTKTPEE 1020
M TS+ L LTPELE MT F + P +K+R QL+ LAQ M +L+ + NKV GCLSTV+V A L D + + Y DS+ ++TKGL +LL GLSGN E I +V P+F+ AG+ ASLT GRNNGF+NML TMK +A + + A E + + +E + A + + L+P + +VD+S G + ES + IV++ F+G+ +KRH+ +Y ++ + M +HA+ + TPEE
Sbjct: 27 MVTSSALNAENLTPELEMMTAAFARMPDEKLRYKQLMFLAQKLAPMPDNLKIDANKVPGCLSTVHVHATLDDSVEPPVVNYTGDSDGILTKGLVALLVRGLSGNTAEVIDKVTPDFVNTAGISASLTPGRNNGFLNMLATMKKQANEVTAGATTTATNEXXEISSASIVTSFDEQEGRPMYNAMMSTLINFLKPTSINLVDNSHQHAGHAGSKGYDGESHFELEIVAECFDGLALVKRHQLIYTILGEIMPKIHALQIKANTPEE 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.50.1 >prot_P-littoralis_Contig148.50.1 ID=prot_P-littoralis_Contig148.50.1|Name=mRNA_P-littoralis_Contig148.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=324bp MMIARAALLLAALATSVCSVGQAFVTSNVAVGSAAGGSFSDRAAAVAAPTback to top mRNA from alignment at P-littoralis_Contig148:230236..236272+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.50.1 ID=mRNA_P-littoralis_Contig148.50.1|Name=mRNA_P-littoralis_Contig148.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6037bp|location=Sequence derived from alignment at P-littoralis_Contig148:230236..236272+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:230236..236272+ >mRNA_P-littoralis_Contig148.50.1 ID=mRNA_P-littoralis_Contig148.50.1|Name=mRNA_P-littoralis_Contig148.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=972bp|location=Sequence derived from alignment at P-littoralis_Contig148:230236..236272+ (Pylaiella littoralis U1_48)back to top |