prot_P-littoralis_Contig146.124.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig146.124.2
Unique Nameprot_P-littoralis_Contig146.124.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 3.610e-130
Identity = 189/217 (87.10%), Postives = 203/217 (93.55%), Query Frame = 0
Query:    6 TQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            TQ+FLG+AATLIASS+AFVAPMAVRS APA+ SS+LKMSAGSDYVATLPGAPFGDGKIFDPL LSDGA+P DIK WREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISA+YPEFWVFSLLGMAFIEYNTI  A+ETPSAVTGEGGLKEDY PG+LGFDPL +KP+ E  L VM+TKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    4 TQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 8.400e-127
Identity = 183/215 (85.12%), Postives = 200/215 (93.02%), Query Frame = 0
Query:    8 MFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            MFLGTAATLIASS+AFVAPMAVRS APA+ +S+LKMSAGSDYVATLPGAPFGDGKIFDPL LSDGAEP +IKLWREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEYNTITKAY  PS VTGEGGL+++YSPG+LGFDPL +KPK +  L  MQTKELNNGRLAMIGIAGMLVQELVNPADILG
Sbjct:    7 MFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 1.570e-118
Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 0
Query:    7 QMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 221
            QMFLGTAA LIASS+AFVAP+AVRS APA+ +S+LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA P DIK WREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISA++PEFW FSLLGMAFIEYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVN  DIL
Sbjct:    5 QMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 4.490e-112
Identity = 167/220 (75.91%), Postives = 193/220 (87.73%), Query Frame = 0
Query:    3 ATTTQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            A ++ MFLGTAATLIASS+AFV PMAVRS APA+ +S+LKMSAG+DY+ATLPGA   +GKIFD L L+DGA+P +IKLWREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI KAY  PS VTGEGGL+++YSPG+LGFDP  IKPK +  L  MQ KELNNGRLAMIGI GMLVQELVN  DILG
Sbjct:    2 AASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 8.720e-97
Identity = 158/216 (73.15%), Postives = 166/216 (76.85%), Query Frame = 0
Query:    7 QMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            QMF+GTAATLIASS+AFVAPMAVRSV     S  LKMSAGSDYVATLPGAPF DGKIFDPLGLSDGA P DIK WREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMAFIEYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 3.330e-95
Identity = 136/161 (84.47%), Postives = 147/161 (91.30%), Query Frame = 0
Query:   62 KIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            +IFDPLGLSDGA P DIK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAF+EYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.540e-94
Identity = 185/388 (47.68%), Postives = 197/388 (50.77%), Query Frame = 0
Query:    7 QMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSS-LKMSAGSDYVATLPGAPFGDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            QMF+GTAATLIASS+AFVAP+AVRSVA   PSSS L MSAGSDYVATLPGAPF DGK                                                                                                                                                                           IFDPLGLSDGA P DIK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 5.680e-92
Identity = 133/160 (83.12%), Postives = 143/160 (89.38%), Query Frame = 0
Query:   62 KIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 221
            KIFDPLGL+DGAE  DIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAR+PEFW FSLL +A IEYNTITKAY  PS VTGEGGL+++YSPG+LGFDPL +KP  +  L  MQTKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 5.750e-87
Identity = 132/219 (60.27%), Postives = 169/219 (77.17%), Query Frame = 0
Query:    4 TTTQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            T+T   +G A+   AS  AF+ P    +++    S++ +MSAGSDYV+TLPGAPF DGK++DP+GLS  A+PEDIK WREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+AR+P+FW  +LL +A++EY  I   +     VTGEGG++ DY PG+LGFDPLG+ P+ E +L VM+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   54 TSTGALVGMASWCFASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 1.110e-82
Identity = 136/222 (61.26%), Postives = 171/222 (77.03%), Query Frame = 0
Query:    5 TTQMFLGTAATLIASSSAFVAPMAV--RSVAPAAPSSSLKMSAGSDYVATLPGAPFG---DGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 221
            T+Q+FLGTAATLIASS+AFVAP+A    S+A  A SS+ KM+AGSDY A+LPGAPFG   +GK FDP GL+   +PE IK WREAE+KHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+ T S VTG G LK +Y PG+LGFDPLG+ PK  ED  ++Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    3 TSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI3.610e-13087.10Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI8.400e-12785.12Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI1.570e-11881.86Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI4.490e-11275.91Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE8.720e-9773.15LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI3.330e-9584.47Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE1.540e-9447.68LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI5.680e-9283.13Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI5.750e-8760.27Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI1.110e-8261.26Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 38..222
e-value: 9.2E-41
score: 141.9
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 3..218
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 60..221
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 52..213
e-value: 3.6E-38
score: 131.6
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 3..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:482160..485564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.124.2mRNA_P-littoralis_Contig146.124.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig146 480601..485582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig146.124.2 ID=prot_P-littoralis_Contig146.124.2|Name=mRNA_P-littoralis_Contig146.124.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MVATTTQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYV
ATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVL
VAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITK
AYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGR
LAMIGIAGMLVQELVNPADILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln