mRNA_P-littoralis_Contig145.26.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: D7FZ49_ECTSI (NAD-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ49_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 4.000e-156 Identity = 259/386 (67.10%), Postives = 294/386 (76.17%), Query Frame = 1
Query: 325 MHKIVISGGLGLLGQRIIRHIFSTGLH-VRVLVVDTATPPVQGFDSAGSTAXXXXXXXXXXXXXXSKDEVLPGLSLKA--------------EIVRGDLACPHVAAAIKSFASGG-GCADSSATXXXXXXPSSLSLSSSLSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGGEEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVKSE 1434
M K V+SGGLGLLGQRI++HI S+G VRV++VDTA P+Q S G +K EVL + + +VRGDL+ VAAAIKSFA G G D + T SS+LSVFHLASVMSGQGE+DF EALRVNIDGTRSLLDTCRQ+GGRPRFVFASSIAAFGGGE+V D TKLLPQSTYGMTKACAELLVNDCTRKG+VDGRIARLPTV+VRPGPPNPAATGCFSSVPKAVL+G+HF+SPVS D H C+ L SAV GLIR+HDASEAD G RDRAITLPAVSL+LRDLE+SA+RLARELGR GTVSYEP++A+EAVVKAMPSAV+ SNR NLGL+E AGA E+V++YVK E
Sbjct: 1 MQKFVLSGGLGLLGQRILQHIVSSGHGCVRVMIVDTA--PLQAAKSGGPPTAAPGITGDPAVGNGAKCEVLGSSTARGAAAPIADDSSTGAVSVVRGDLSSSDVAAAIKSFAVGDDGGGDHAETTS----------SSTLSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGGEQVTDETKLLPQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSPDLRHACVGLCSAVDGLIRLHDASEADFGPRDRAITLPAVSLSLRDLEESAARLARELGRPPGTVSYEPDSAVEAVVKAMPSAVKASNRTANLGLLESAGAHEIVEDYVKGE 374
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A6J4K8H2_9BACT (Epimerase domain-containing protein n=1 Tax=uncultured Armatimonadetes bacterium TaxID=157466 RepID=A0A6J4K8H2_9BACT) HSP 1 Score: 208 bits (530), Expect = 1.320e-57 Identity = 122/248 (49.19%), Postives = 158/248 (63.71%), Query Frame = 1
Query: 697 SVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG----EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVK 1428
S+FHLAS++SG+ E+ FD+ALRVN+DG R+L + R++GGR R VFASSIA FGG E D TKL PQ+TYGMTKA EL++ND TRKG+ DGR ARLPTVI+RPG PN AA+G S + + LNG PV D HP + V LI +HD A +G RDRAI LPA S+T R E++ ++ARELG G + P+ I+ +V P AV S RA LGL ++ +Y++
Sbjct: 89 SIFHLASMVSGECEERFDDALRVNLDGGRNLFEAARELGGRTRLVFASSIACFGGDAAMPEPCTDQTKLTPQTTYGMTKAVCELMINDYTRKGFFDGRSARLPTVIIRPGKPNTAASGWASGMFREPLNGATCSLPVRRDQRHPMTGHRTVVDSLIAVHDLPSASIG-RDRAIGLPATSVTPRLAERALRQVARELGLPLGAIEERPDPRIQGIVDHWPVAVDGS-RALALGLPPVPPLQTIIRDYLE 334
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A2S6UCI5_9PROT (Putative epimerase/dehydratase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6UCI5_9PROT) HSP 1 Score: 202 bits (515), Expect = 9.550e-56 Identity = 118/251 (47.01%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG---EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVKSEW 1437
+ VFHLASV+S GEQDFD A+RVN DG R +L+ R G PR V ASS+A FGG E V + T+++PQ+TYGMTKA EL++ND TRKG++DGR ARLPTVI+RPG PN AA+G S V + L+G+ +V PV+ D I SA+ GL + DA +G DR + LP + + D+ + R+A E G + G V+ +P+ AIEA+VK+ P A++ S RA LGL D ++ EY+ ++W
Sbjct: 70 IGVFHLASVVSAGGEQDFDLAMRVNFDGGRHILEALRARKGTPRIVLASSLAVFGGPDMPEAVTEMTRVVPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVAMDTRMMVIGARSAIAGLTGLMDADGEGLGA-DRVVNLPNNAYAVTDMIAALERVAAENGITFGPVTPKPDPAIEAIVKSWPLAMEDS-RARALGLPADESLEAIIREYI-ADW 317
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A2E6QK31_9PROT (NAD-dependent epimerase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QK31_9PROT) HSP 1 Score: 202 bits (515), Expect = 1.130e-55 Identity = 114/248 (45.97%), Postives = 163/248 (65.73%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG---EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVK 1428
+SVFHLASV+SG GE+DFD A+RVN+DG+R++ + CR+ G PR VFAS++A FGG + V D TK +PQ+TYGMTKA EL++ND TRKG+ DGR ARLPTVI+RPG PN A +G S + + LNG +V + P IS+ AV+G I +H+A +G DRA+ LP++S+T+ ++ S R+A + R G + EP+ +E+V P ++RAT+LGL D ++V Y++
Sbjct: 78 ISVFHLASVVSGGGEKDFDLAMRVNLDGSRAVFEACRKRGSTPRMVFASTLATFGGSAMPKTVGDTTKQVPQTTYGMTKAACELMINDYTRKGFFDGRSARLPTVIIRPGKPNLALSGFASGIFREPLNGIDYVCAAGLETRMPVISVRMAVEGFIALHEAPGDAIG-EDRAVGLPSLSVTVAEMIDSLQRVAGD--RPLGAIKVEPDPLVESVCSTWPFYTD-NSRATSLGLPLDESLDDIVRGYIE 321
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A4D9D647_9STRA (Epimerase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D647_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.600e-55 Identity = 115/251 (45.82%), Postives = 161/251 (64.14%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCR------QVGGRP-RFVFASSIAAFGGGEEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYV 1425
+++FHLASVMSG+GE++FD+ + VN+DGT++LL+ R +VG +P RFVF SS AAFG EV D TKL PQSTYGMTKA EL+VND TRKG+VDGR RLPTVIVRPG N A+TGCFS+V + +L G +V P HP IS ++GL+ + + +G DR++ LPA+ T+ +L ++A+ G G VS + + + +V P ++ S RA +LGL D ++++YV
Sbjct: 101 VTIFHLASVMSGEGEEEFDKCVAVNLDGTQNLLEKARALHASGRVGEKPVRFVFPSSFAAFGPHPEVSDETKLTPQSTYGMTKAVGELMVNDYTRKGWVDGRTGRLPTVIVRPGNKNGASTGCFSAVVRELLMGHDYVIPYDPRQTHPVISTRRTIKGLLALAEVEGESLGG-DRSVNLPALQTTMEELLFHTRQIAQGRGIPMGEVSVKIDPWVSGIVGRFPQVMR-SPRAESLGLPRDGSVEAVIEDYV 349
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A843RJW1_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RJW1_9PROT) HSP 1 Score: 199 bits (505), Expect = 3.180e-54 Identity = 118/248 (47.58%), Postives = 155/248 (62.50%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGGEE---VMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVK 1428
+SVFHLASV+SG GE+DFD A+RVN+ G ++ + CR +PR VFASSIA FGG V D K PQ+TYG TKA ELLVND TRKG+ DGR ARLPTVIVRPG PN AA+ S + + LNGE PVS D + P + S V GLI +H+A A +G DRA++LP+ ++T+RD+ S R+A R G + ++P+ I+ + P RAT LGL DA +V+ Y++
Sbjct: 80 VSVFHLASVVSGGGEKDFDLAIRVNLTGGLNVFEACRARACQPRLVFASSIAVFGGSTMAPVVGDHAKQTPQTTYGATKAICELLVNDYTRKGFFDGRSARLPTVIVRPGKPNAAASSFVSGLFREPLNGEVCRIPVSEDTVMPLLGYRSIVGGLIALHEAESAALGD-DRAVSLPSFTVTVRDMIDSLKRVAG--ARKLGEIVFQPDPFIQRICDGWPRDASYE-RATKLGLPRDASLDAIVENYIE 323
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: UPI001F0D324E (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001F0D324E) HSP 1 Score: 198 bits (503), Expect = 3.480e-54 Identity = 116/248 (46.77%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG---EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVK 1428
+SVFHLASV+SG GE DFD A+RVN+ G ++ + CR G PR VFASSIA FGG V D K PQ+TYGMTK ELLVND TRKG++DGR ARLPTVIVRPG PN AA+ S + + LNGE PV+ + + P + S V G I +H+A +G DRA++LP+ ++++ ++ ++ +R+A GRS G + +EP+ IEA+ P +RAT LGL +DA +V+ Y++
Sbjct: 60 ISVFHLASVVSGGGELDFDLAMRVNLHGGLNVFEACRARSGLPRLVFASSIAVFGGAGMPAVVGDHVKQTPQTTYGMTKTICELLVNDYTRKGFLDGRSARLPTVIVRPGKPNQAASSFVSGLFREPLNGEVCRIPVAPETMMPVLGYRSIVGGFIALHEADGEALGD-DRAVSLPSFTVSVAEMIEALNRVAS--GRSLGEIVFEPDPFIEAICAGWPQDAS-HDRATALGLPKDASLDVIVENYIE 303
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A849E7C3_9HYPH (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E7C3_9HYPH) HSP 1 Score: 196 bits (497), Expect = 4.610e-53 Identity = 112/248 (45.16%), Postives = 158/248 (63.71%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG---EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVK 1428
+SVFHLASV+SG GE+DFD A+RVN+ G ++ + R PR VFASSIA FGG + V D K PQ+TYGMTKAC ELL+ND TRKG++DGR ARLPTVIVRPG PN AA+ S V + L GE PV + + P + + V+G++ +H+ +G DRA++LP++ +T+ D+ + R+A R G ++ EP+ IEA+V++ P A + RA LGL +D ++V Y++
Sbjct: 80 ISVFHLASVVSGGGEKDFDLAIRVNLTGGMNIFEALRARASTPRLVFASSIAVFGGDHMPDVVGDHGKQTPQTTYGMTKACCELLINDYTRKGFLDGRSARLPTVIVRPGVPNAAASSFASGVFREPLKGEPCALPVKLETVMPVLGYRNIVEGILALHELPSEKLGD-DRAVSLPSMDVTVADMVDALKRVAHN--RKLGEITVEPDPFIEAIVRSWPVATDDA-RALALGLPKDNSLDDIVHHYIE 323
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: A0A437QH10_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QH10_9PROT) HSP 1 Score: 195 bits (495), Expect = 8.860e-53 Identity = 114/247 (46.15%), Postives = 155/247 (62.75%), Query Frame = 1
Query: 694 LSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG---EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYV 1425
+ VFHLASV+SG GE+DFD A+RVN+DG R +L+ CR +G PR +F SSIA FGG + V D K PQ+TYGMTKA EL++ND TRKG++DGR ARLPTVI+RPG PN AA+ FS + + L G PV D HP I + V G++ +++A +G DRA TLP+ S T+ +L + R+A + R G + EP+ I+ +VK P A ++RA LGL D ++V Y+
Sbjct: 80 IGVFHLASVVSGGGEKDFDLAMRVNLDGGRYVLEACRALGSAPRVLFTSSIATFGGAAMPDVVGDLVKQTPQTTYGMTKAVLELMINDYTRKGFLDGRSARLPTVIIRPGKPNAAASSFFSGMFREPLAGVECKIPVPPDVRHPVIGYRTVVDGILALYEADSDAIGD-DRAFTLPSTSATVAELMDALDRVAGD--RPLGKRTVEPDPFIQDIVKNWPRAAG-ADRALALGLPHDNSLDDIVRAYI 322
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Match: UPI001D04B801 (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D04B801) HSP 1 Score: 196 bits (497), Expect = 1.390e-52 Identity = 143/392 (36.48%), Postives = 196/392 (50.00%), Query Frame = 1
Query: 301 PGS---VHARNMHKIVISGGLGLLGQRIIRHIFSTGLHV----------RVLVVDTATPPVQGFDSAGSTAXXXXXXXXXXXXXXSKDEVLPGLSLKAEIVRGDLACPHVAAAIKSFASGGGCADSSATXXXXXXPSSLSLSSSLSVFHLASVMSGQGEQDFDEALRVNIDGTRSLLDTCRQVGGRPRFVFASSIAAFGGG---EEVMDGTKLLPQSTYGMTKACAELLVNDCTRKGYVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLNGEHFVSPVSSDFLHPCISLSSAVQGLIRMHDASEADMGTRDRAITLPAVSLTLRDLEKSASRLARELGRSSGTVSYEPENAIEAVVKAMPSAVQVSNRATNLGLVEDAGAFEMVDEYVK 1428
PGS R K+VI+GG G +GQR+ + + G +L+ D A PP + DE + +I+ GD++ P AA+ +SVFHLASV+SG GE+DFD ALRVN+ G ++ + CR PR VFASSIA FGG V D K PQ+TYG TKA ELLVND TRKG+ DGR ARLPTVIVRPG PN AA+ S + + LNGE PVS D + P + + V G I +H+A AD+ DRA +LP+ ++T+RD+ + R+A + R G + ++P+ I+ + P RAT LGL +DA +V+ Y++
Sbjct: 32 PGSWRRERGRQAVKVVITGGTGFIGQRLAQALLQRGGLTAPSGSQEPIDELLLFDVAEPPQR---------------------PAWADE-------RVKILSGDISDPAQVAALVDR-------------------------DDISVFHLASVVSGGGEKDFDLALRVNLTGGLNVFEACRARASLPRVVFASSIAVFGGAGMAPVVGDHAKQTPQTTYGATKAICELLVNDYTRKGFFDGRSARLPTVIVRPGKPNAAASSFVSGLFREPLNGETCRIPVSEDTVMPVLGYRAIVGGFIALHEADGADLDD-DRAFSLPSFTVTVRDMIDALRRVAGD--RKLGEIVFKPDPFIQRICDGWPKDASYE-RATKLGLPKDASLEAIVENYIE 366 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.26.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig145.26.2 >prot_P-littoralis_Contig145.26.2 ID=prot_P-littoralis_Contig145.26.2|Name=mRNA_P-littoralis_Contig145.26.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=374bp MHKIVISGGLGLLGQRIIRHIFSTGLHVRVLVVDTATPPVQGFDSAGSTAback to top mRNA from alignment at P-littoralis_Contig145:105617..110821+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig145.26.2 ID=mRNA_P-littoralis_Contig145.26.2|Name=mRNA_P-littoralis_Contig145.26.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5205bp|location=Sequence derived from alignment at P-littoralis_Contig145:105617..110821+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig145:105617..110821+ >mRNA_P-littoralis_Contig145.26.2 ID=mRNA_P-littoralis_Contig145.26.2|Name=mRNA_P-littoralis_Contig145.26.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1122bp|location=Sequence derived from alignment at P-littoralis_Contig145:105617..110821+ (Pylaiella littoralis U1_48)back to top |