mRNA_P-littoralis_Contig145.23.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5K6P0_9PHAE (C2H2-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P0_9PHAE) HSP 1 Score: 470 bits (1210), Expect = 1.240e-159 Identity = 251/365 (68.77%), Postives = 284/365 (77.81%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDA--------KERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRKF-DRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPK 1126
MSLS+PLSH LLK+L KL++ K+RGLILDRHFET+K HVK GNSVA RWDAIE+ L+QT VF+EEEW+TQIDGE QGI SSTR S QDAGGARGAPS HPP A A AA KRK DRGK+ R+RAA G LGGNI+NAFA GSGKPIERTRGGV E VSGI+FPPPAP R CPHCPMTFVNEQGLG HV TQHS ANM NGLRLQRMLG+ P G V PW +AGPGRCW VK+DGATGAASFVLQRK F +DL+SDGF D+K K TRGA + Y FRFKA+V+ QLR+LQE A +L++ EQLTP QYLE LKV++SLI KWA++E V+ AADDV K L+AK QPK
Sbjct: 1 MSLSNPLSHGLLKDLGKLQERVSSTXQELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLGGNIINAFARGSGKPIERTRGGVIEHVSGINFPPPAPERRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKCKLYDFRFKAYVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKHQPK 363
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE) HSP 1 Score: 485 bits (1249), Expect = 6.970e-159 Identity = 255/361 (70.64%), Postives = 285/361 (78.95%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRKF-DRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
MSLS+PLSH LLK+L KL + K+RGLILDRHFET+K HVK GNSVA RWDAIE+ L QT VF+EEEW+TQIDGE QGI SSTR S QDAGGARGAPS HPP A A AA KRK DRGK+ R+RAA G LGGNI+NAFA GSGKPIERTRGGV E VSGI+FPPPAP R CPHCPMTFVNEQGLG HV TQHS ANM NGLRLQRMLG+ P G V PW +AGPGRCW VK+DGATGAASFVLQRK F +DL+SDGF D+K K TRGA +R RY FRFK HV+ QLR+LQE A +L++ EQLTP QYLE LKV++SLI KWA++E V+ AADDV K L+AKQQPK P
Sbjct: 1 MSLSNPLSHGLLKDLGKLSELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLEQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLGGNIINAFARGSGKPIERTRGGVTEHVSGITFPPPAPERRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKTHVVIQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFP 359
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 8.530e-159 Identity = 255/361 (70.64%), Postives = 286/361 (79.22%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRKF-DRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
MSLS+PLSH LLK+L KL + K+RGLILDRHFET+K HVK GNSVA RWDAIE+ L+QT VF+EEEW+TQIDGE QGI SSTR S QDAGGARGAPS HPP A A AA KRK DR K+ R+RAA G LGGNI+NAFA GSGKPIERTRGGV E VSGI+FPPPAP R CPHCPMTFVNEQGLG HV TQHS ANM NGLRLQRMLG+ P G V PW +AGPGRCW VK+DGATGAASFVLQRK F +DL+SDGF D+K K TRGA +R RY FRFKAHV+ QLR+LQE A +L++ EQLTP QYLE LKV++SLI KWA++E V+ AADDV K L+AKQQPK P
Sbjct: 1 MSLSNPLSHGLLKDLGKLSELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRWKQARDRAAQGVLGGNIINAFARGSGKPIERTRGGVTEHVSGINFPPPAPERRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFP 359
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5KBV2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBV2_9PHAE) HSP 1 Score: 477 bits (1227), Expect = 3.060e-158 Identity = 252/368 (68.48%), Postives = 288/368 (78.26%), Query Frame = 2
Query: 41 LPCRGIMSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGA--PSQHPPDAAAPAAKKRKFDRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
LP +GIMSLS+PLSH LLK+L KL + K RGLILDRHFET+K HVK GNSVA RWDAIES L+Q +F E EW+ QIDGE+QGI SSTRLSL QQDA ARGA PSQHPP AAA A+ RK DRGK RERA+ GTLG NI NAF+IGSG+PIERTRGGVKE VSGISFPPPAP SRR C HCPMT VNEQGLG HV TQHS+ANM NG+RL+RML ++ G VLPWE AGPGRCW VK+D ATGAASFVLQRK FL +DL+SDGF D++ K TRGA +R RY +RFKA+ +NQLRIL++ A +LW+ E+ TP QYLE LKVH+S I KWAK+E V AADDV K+L+AKQQ K P
Sbjct: 220 LPHQGIMSLSNPLSHGLLKDLGKLAELKGRGLILDRHFETIKTHVKAGNSVAKERWDAIESAWGLKQNGIFDEGEWIAQIDGEIQGITSSTRLSLSSQQDASSARGAAAPSQHPPAAAADTAR-RKVDRGKHARERASKGTLGDNIWNAFSIGSGQPIERTRGGVKEFVSGISFPPPAPESRRSCLHCPMTIVNEQGLGIHVRTQHSSANMSNGVRLRRMLWKNLEGRVLPWEGAGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM--DRETKETRGAPKRRRYDYRFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQSKRWFP 584
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5K1E6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E6_9PHAE) HSP 1 Score: 442 bits (1137), Expect = 1.140e-150 Identity = 229/317 (72.24%), Postives = 254/317 (80.13%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRKF-DRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYL 1006
MSLS+PLSH LLK+L KL + K+RGLILDRHFET+K HVK GNSVA RWDAIE+ L+QT VF+EEEW+TQIDGE QGI SSTR S QDAGGARGAPS HPP A A AA KRK DRGK+ R+RAA G L GNI+NAFA GSGKPIERTRGGV E VSGI+FPPPAP R CPHCPMTFVNEQGLG HV TQHS ANM NGLRLQRMLG+ P G V PW +AGPGRCW VK+DGATGAASFVLQRK F +DL+SDGF D+K K TRGA +R RY FRFKAHV+ QLR+LQE A +L++ EQLTP QYL
Sbjct: 1 MSLSNPLSHGLLKDLGKLSELKQRGLILDRHFETIKAHVKAGNSVAKQRWDAIENARGLKQTGVFNEEEWITQIDGEAQGITSSTRPSFLTSQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLSGNIINAFARGSGKPIERTRGGVTEHVSGINFPPPAPERRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYL 315
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5JIJ5_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ5_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 4.490e-150 Identity = 243/362 (67.13%), Postives = 283/362 (78.18%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGA--PSQHPPDAAAPAAKKRKFDRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
M LS+P SH LLK+L KL + K RGLILDRHFET+K HVK GNSVA RWDAIES L++ +F E +W+ QIDGE+QGI SSTRLSLP QQDA ARGA PSQHPP AAA A+ RK +R K RERAA GTLGG+I NAF+IGSG+PIERTRGGVKE VSGISFPPPAP SRR CPHCPMTF+NEQGLG HV TQHS+A M NG+RL+RML ++ G VLPWE+AGPGRCW VK+D ATGAASFVLQRK FL +DL+SDGF D++ K RGA +R RY +RFKA+ +NQLRIL++ A +L + E+ TP QYLE LKVH+S I KWAK+E V AADDV K+L+AKQQPK P
Sbjct: 1 MFLSNPSSHGLLKDLGKLAELKGRGLILDRHFETIKTHVKAGNSVAKERWDAIESAWGLKKNGIFDEGQWIAQIDGEIQGITSSTRLSLPSQQDASSARGAAAPSQHPPAAAAGTAR-RKVEREKHARERAAKGTLGGSICNAFSIGSGQPIERTRGGVKEFVSGISFPPPAPESRRSCPHCPMTFMNEQGLGIHVRTQHSSATMSNGVRLRRMLRKNLGGRVLPWEEAGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM--DRETKEARGASKRRRYDYRFKANAVNQLRILEDNAADLCKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFP 359
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5LCI6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCI6_9PHAE) HSP 1 Score: 442 bits (1136), Expect = 5.240e-148 Identity = 241/364 (66.21%), Postives = 273/364 (75.00%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRKF-DRGKKDRERAAHGTLGGNILNAFAIGSGKPIE---RTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
MSLS+PLSH LLK+L KL + K+RGLILDRHFET+K HVK GNSVA RWDAIE+ L+QT VF+EEEW+TQIDGE QGI SSTR S QDAGGARGAPS HPP A A AA KRK DRGK+ R+RAA G LGGNI+NAFA GSGKP + RTR + P P CPHCPMTFVNEQGLG HV TQHS ANM N LRLQRMLG+ P G V PWE+AGPGRCW VK+DGATGAASFVLQRK F +DL+SDGF D+K K TRGA +R RY FRFKAHV+ QLR+LQE A +L++ EQLTP QYLE LKV++SLI KWA++E V+ AADDV K L+AKQQPK P
Sbjct: 1 MSLSNPLSHGLLKDLGKLSELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLGGNIINAFARGSGKPTQWRKRTR----------TRAPSQPYFVIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNRLRLQRMLGKIPKGYVQPWEEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFP 352
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5JKI6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI6_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 6.540e-141 Identity = 226/343 (65.89%), Postives = 251/343 (73.18%), Query Frame = 2
Query: 113 KDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRK-FDRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
++ K+RGLILDRH ET+K HVK GNSVA RWDAIES L+Q VF +EEWVTQIDGE QGI SSTRLS +RK DRGK+ RERAA GTL GNI NAFAIGS PIERTRGGVKEL+SGISFPPP P SRR CPHCPMTFVNEQGLG HV TQHS+ANM NG+RL+RML +D GSVLPWE AGPGRCW VK D ATG ASFVLQRK FL +DLDSDGF D+KPK TRGA +R RY FR KAH +NQLRILQ+ AE+LW+ EQ TP Q+LE LK+ +S I KWAK E E V AADDV K+L+AKQQPK P
Sbjct: 30 RELKQRGLILDRHLETIKAHVKAGNSVAKKRWDAIESAWGLKQNGVFDDEEWVTQIDGETQGITSSTRLSSXXXXXXXXXXXXXXXXXXXXXXXGTARRKAVDRGKQARERAAKGTLDGNICNAFAIGSRGPIERTRGGVKELISGISFPPPTPESRRSCPHCPMTFVNEQGLGIHVRTQHSSANMSNGVRLRRMLRKDVGGSVLPWEAAGPGRCWHVKFDHATGTASFVLQRKRFLDLDLDSDGFM--DRKPKDTRGAPKRRRYDFRVKAHAVNQLRILQDNAEDLWKDEQRTPLQFLEDRLKIPYSNIVKWAKNEKELVAAAADDVKKSLLAKQQPKRWFP 370
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5JNS2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS2_9PHAE) HSP 1 Score: 415 bits (1067), Expect = 7.690e-140 Identity = 222/328 (67.68%), Postives = 254/328 (77.44%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGA--PSQHPPDAAAPAAKKRKFDRGKKDRERAAHGTLGGNILNAFAIGSGKP-IERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHS 1033
MSLS+PLSH LLK+L KL + K RGLILDRHFET+K HVK GNSVA RWDAIES L+Q +F E EW+ QIDGE+QGI SSTRLSL QQDA ARGA PSQHP AAA A+ RK DRGK RERAA GTLGG I NAF+IGSG+P IERTRGGVKE VSGISFPPPAP SR CP+CPMTFVNEQGLG HV TQHS+ANM NG+RL+RML ++ G VLPWE+AGPGRCW VK+D AT AASFVLQRK FL +DL+SDG D++ K TRGA +R RY +RFKA+ +NQLRIL++ + W E+ T QYL LKVH+S
Sbjct: 1 MSLSNPLSHGLLKDLGKLAELKGRGLILDRHFETIKTHVKAGNSVAKERWDAIESAWGLKQNGIFDEGEWIPQIDGEIQGITSSTRLSLSSQQDASSARGAAAPSQHPSAAAAGTAR-RKVDRGKHARERAAKGTLGGIICNAFSIGSGQPQIERTRGGVKEFVSGISFPPPAPESRPSCPYCPMTFVNEQGLGIHVRTQHSSANMSNGVRLRRMLRKNLAGRVLPWEEAGPGRCWHVKVDDATRAASFVLQRKRFLDLDLESDGLM--DRETKETRGAPKRRRYDYRFKANAVNQLRILEDNTADFWMEEERTRLQYLGDRLKVHYS 325
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Match: A0A6H5K740_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K740_9PHAE) HSP 1 Score: 434 bits (1116), Expect = 1.250e-139 Identity = 234/361 (64.82%), Postives = 261/361 (72.30%), Query Frame = 2
Query: 59 MSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEHVKVGNSVATGRWDAIESGLELRQTDVFSEEEWVTQIDGEVQGIASSTRLSLPPQQDAGGARGAPSQHPPDAAAPAAKKRK-FDRGKKDRERAAHGTLGGNILNAFAIGSGKPIERTRGGVKELVSGISFPPPAPGSRRQCPHCPMTFVNEQGLGTHVSTQHSTANMYNGLRLQRMLGQDPNGSVLPWEQAGPGRCWRVKIDGATGAASFVLQRKSFLHMDLDSDGFAKEDQKPKATRGAKQRNRYSFRFKAHVINQLRILQEKAEELWRAEQLTPAQYLEYTLKVHHSLISKWAKEEDENVRLAADDVMKNLMAKQQPKGTHP 1138
MS +PLSH +LKEL KL + K+RGLILDRHFET+K HVK GNSVA RWDAIES L++ VF EEEWVTQIDGE QGI SSTRLS +RK DRGK+ RERAA GTLGGNI NAFAIGS PIERTRGGVKEL+SGISFPPP P SRR CPHCPMTFVNEQGLG HV TQHS+ANM NG+RL+RML +D GSVLPWE AGPG W VK D ATG S VLQRK FL +DLDSDGF D+KPK TRGA +R RY FRF A+ +NQLRILQ+ AE LW+ E+ TP Q+LE LK+ +S I KWAK E E V AADDV K+L+AKQQPK P
Sbjct: 1 MSQCNPLSHGILKELGKLAELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIESAWGLKKNGVFDEEEWVTQIDGETQGITSSTRLSSXXXXXXXXXXXXXXXXXXXXXXXGTARRKAVDRGKQARERAAKGTLGGNICNAFAIGSRGPIERTRGGVKELISGISFPPPTPESRRSCPHCPMTFVNEQGLGIHVRTQHSSANMSNGVRLRRMLRKDVGGSVLPWEAAGPGHYWHVKFDHATGTTSLVLQRKRFLDLDLDSDGFM--DRKPKDTRGAPKRRRYDFRFNAYAVNQLRILQDNAEHLWKEEKGTPLQFLEDRLKIPYSNIVKWAKNEKELVAAAADDVTKSLLAKQQPKRWFP 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.23.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig145.23.2 >prot_P-littoralis_Contig145.23.2 ID=prot_P-littoralis_Contig145.23.2|Name=mRNA_P-littoralis_Contig145.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=374bp MATPEVCLPCRGIMSLSSPLSHALLKELRKLKDAKERGLILDRHFETVKEback to top mRNA from alignment at P-littoralis_Contig145:45216..48205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig145.23.2 ID=mRNA_P-littoralis_Contig145.23.2|Name=mRNA_P-littoralis_Contig145.23.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2990bp|location=Sequence derived from alignment at P-littoralis_Contig145:45216..48205+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig145:45216..48205+ >mRNA_P-littoralis_Contig145.23.2 ID=mRNA_P-littoralis_Contig145.23.2|Name=mRNA_P-littoralis_Contig145.23.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1122bp|location=Sequence derived from alignment at P-littoralis_Contig145:45216..48205+ (Pylaiella littoralis U1_48)back to top |