prot_P-littoralis_Contig145.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig145.20.1
Unique Nameprot_P-littoralis_Contig145.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length109
Homology
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BLAST of mRNA_P-littoralis_Contig145.20.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 6.280e-25
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:   41 GVVAGSGTVTSEGLDVEMARKMTKSLLFALTKGTLVDLMKAGGGDSKVWRKKDFLVDALLSIVGGSSED 109
            GVVAGSGTVT+EGL VE  RKMTK  LF LTKGTLVD +KA GGD+KVWRKK+FLV+ALLS+ GGSSED
Sbjct:  291 GVVAGSGTVTNEGLAVETVRKMTKPQLFELTKGTLVDHIKAAGGDAKVWRKKEFLVNALLSVAGGSSED 359
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BLAST of mRNA_P-littoralis_Contig145.20.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 5.170e-19
Identity = 53/67 (79.10%), Postives = 56/67 (83.58%), Query Frame = 0 
Query:    1 SKGELALRQQLRATSAKGAATAKRAAPVGGGTDGTDQLAGGVVAGSGTVTSEGLDVEMARKMTKSLL 67
            SKGELALRQ LRATSAKG ATAK  APVGGG DGT +LAGGV+AGSGTVT+EGL VE  RKMTK  L
Sbjct:  314 SKGELALRQNLRATSAKGEATAKGVAPVGGGIDGTSRLAGGVMAGSGTVTNEGLAVETVRKMTKPQL 380
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9K2_9PHAE6.280e-2578.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW14_9PHAE5.170e-1979.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig145contigP-littoralis_Contig145:31034..31360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig145.20.1mRNA_P-littoralis_Contig145.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig145 31034..31361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig145.20.1 ID=prot_P-littoralis_Contig145.20.1|Name=mRNA_P-littoralis_Contig145.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=109bp
SKGELALRQQLRATSAKGAATAKRAAPVGGGTDGTDQLAGGVVAGSGTVT
SEGLDVEMARKMTKSLLFALTKGTLVDLMKAGGGDSKVWRKKDFLVDALL
SIVGGSSED
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