prot_P-littoralis_Contig1442.3.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1442.3.2
Unique Nameprot_P-littoralis_Contig1442.3.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length383
Homology
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 1.060e-104
Identity = 204/411 (49.64%), Postives = 245/411 (59.61%), Query Frame = 0
Query:    1 MRGTGSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFAYPDFVGEGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKVSR------------MRHAAV------------------PGAACSCVLSSIFTLKQLRS--IIYGLVVRSYLPSRDFCETVGLLCLHHEIQFSRCAPAVYSLPHVLHKLRLHTSPTRLYSTSCQRPCRPPWYRFLLRALRANITVEDIEIRFCDGDAAVVRGSTTVNIDAGRYDEEYLPWTIGRSRGTGLIVDASTNVWVRRHTIYDNGVAGLHIMNSNNFTFEATIDSD-GSVGDGNVGSLDGQQPIEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCVIKTDEFSEVTIDAEEDELFFEDNCYVKV 378
            M+GTGSGA GF +LDA  LGT++DNPSDTF+VG+T I+YWGG  YPDFVG G+GDQ AI GAIC VKK ++DGV+CV  ++  TG V              M+   +                   GA  +  + +I  +  +R   I    +  +Y P  D    V  L        S C   V S                                        NIT E ++IR+C GDA VVR ST VNIDAGRYDEEYLPWTIG S GTGLIVD S ++WVRR T Y+N VAGLHIM SNNFTFEATI S+ GS G+GNVGS+DGQQPIE+I+  S L+ FQDM+VQSVNDPVMTI++ST VSFTN G S V +GTC I+TD+ S VTIDA+EDEL  E  CYVKV
Sbjct:  798 MKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVGSTFIEYWGGDGYPDFVGSGSGDQNAINGAICGVKKGTYDGVNCVDVDDTATGTVDLSWGAYYVNGNIFMQSGVLLLGSFGDDDPHTTDIVLEEGAEGNTDIDAIVVMDGIRDAWIEKVWIQGNYDPETDGISAVSGLG-------SACLSVVNS---------------------------------------QNITCEGVDIRYCSGDALVVRDSTLVNIDAGRYDEEYLPWTIGLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTITDSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162          
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 4.630e-104
Identity = 204/400 (51.00%), Postives = 248/400 (62.00%), Query Frame = 0
Query:    1 MRGTGSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFAYPDFVGEGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKVSR------------MRHAAVPGAACSCVLSSIFTLKQLRSIIYGLVVRSYLPSRDFCETVGL----LCLHHEIQFSRCAPAVYSLPHVLHKLRLHTSPTRLYSTSCQRPCRPPWYRFLLRALRANITVEDIEIRFCDGDAAVVRGSTTVNIDAGRYDEEYLPWTIGRSRGTGLIVDASTNVWVRRHTIYDNGVAGLHIMNSNNFTFEATID----SDGSV--GDGNVGSLDGQQPIEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCVIKTDEFSEVTIDAEEDELFFEDNCYVKV 378
            M+GTGSGA GFKL +ARFLGT +DNPS+TFYVG+T ++ W    YPDFV EGTGDQKAIMGAICAVKKASFDGVDCVGG++A TG+VS             M+      A+ S   S   T   L     G    + +   D      L    +  H++ + S   PAV  L  V   +   T                            NIT     +   DGDA VVR S  VNIDAG YDEEY PWTIG+SRGTG++VD+S +VW+RR+T  DNG+AG+H+  SNNFTFEATI     +D  V  G+GNVGSLDGQQPIE+I+E+S L+KFQDM+VQSVNDPVMT+S S+GVSF N G S VE+GTCVI+TD  SEVT   ++ EL  +  CYVKV
Sbjct:  779 MKGTGSGAPGFKLANARFLGTAIDNPSNTFYVGSTYVESWRSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVYLDASFSIDDSPYTTDIILEDGAAGKTDTAAIIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGST----------------------------NITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIVESSTLVKFQDMKVQSVNDPVMTVSGSSGVSFDNCGFSNVESGTCVIQTDATSEVTT-GDDPELSLDGTCYVKV 1149          
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.740e-103
Identity = 196/404 (48.51%), Postives = 249/404 (61.63%), Query Frame = 0
Query:    1 MRGTGSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFAYPDFVGEGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKVSR-----------MRHAAVPGAACSCVLSSIFTLKQL-------RSIIYGLVVRSYLPSRDFCET--VGLLCLHHEIQFSRCAPAVYSLPHVLHKLRLHTSPTRLYSTSCQRPCRPPWYRFLLRALRANITVEDIEIRFCDGDAAVVRGSTTVNIDAGRYDEEYLPWTIGRSRGTGLIVDASTNVWVRRHTIYDNGVAGLHIMNSNNFTFEATI------DSDGSVGDGNVGSLDGQQPIEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCVIKTDEFSEVTIDAEEDELFFEDNCYVKV 378
            M+GTGS A GFKL +ARF GT +DNPSDTFYVG+T +  W    YPDFV EGTGDQKAIMGAICAVKKASFDGVDCVGG++A TG+VS               + V   A   +  S +T   +       ++    ++V   + +     T  +G    +++ + S   P V+ L  V   +   T                            NIT  D  +   DGDA VVR S  +NID+G YD++YLPWTIG+SRGTG++VD+S +VWVRR+T YDNGVAG+H+  SNNFTFEATI      +     G+GNVGSLDGQQPIE+++E+S L+KFQDM+VQSVNDPV+ +S S+GVSF N G S VETGTCVI+TD  SEVT   ++ EL  +  CYVKV
Sbjct:  594 MKGTGSEAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEWNSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVHLHAWFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIG----NYDSETSNDTPTVHGLGSVGLSITGST----------------------------NITCIDASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLDGQQPIEVVVESSTLVKFQDMKVQSVNDPVIVVSGSSGVSFDNCGFSNVETGTCVIQTDTTSEVTT-GDDPELSLDGTCYVKV 964          
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 3.760e-98
Identity = 192/387 (49.61%), Postives = 252/387 (65.12%), Query Frame = 0
Query:    1 MRGTGSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFA--YPDFVGEGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKVSRMRHAAVPGAACSCVLSSIFTLKQLRSIIYGLVVRSYLPSRDFCETVGLLCLHHEIQFSRCAPAVYSLPHVLHKL------RLHTSPTRLYSTSCQRPCRPPWYRFLLRALRA-NITVEDIEIRFCDGDAAVVRGSTTVNIDAGRYDEEYLPWTIGRSRGTGLIVDASTNVWVRRHTIYDNGVAGLHIMNSNNFTFEATIDSDGSVGDGNVGSLDGQQPIEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCVIKTDEFSEVTIDAEEDELFFEDNCYVKV 378
            ++GTGSGA GF +LD R +GT +DNP+DT YVG+T I+ W G    YPDFV EGTGDQK IM AIC VKKASFDGVDCVGG++A TG V       V       V  +IF    ++S ++  +  S+  S D     G++ L           A+  +  + + +      R H  P     TS   P  P      L  + + NIT+ D EIRF DGDA VVR S  ++IDAG Y+E Y PW++  SRGTGLIVD+  +++VRRHT+Y+NGVAG+HI+ +NNFTF+ATI  + +VG+GNVG+LDGQQPI++IIE+S L+ F D+RVQS NDP+M +S+S+ VSF N GLS VE   CVI+ D+ S VTIDA+EDEL  + +CYVKV
Sbjct:  788 VQGTGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTV-------VLPQGSWYVDGNIF----MKSGVF--LDGSF--SEDSPYFTGII-LEEGAAGKTDIDAMVVMDGISNAMTDNIWIRGHYDP----DTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVSDSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154          
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.370e-84
Identity = 175/390 (44.87%), Postives = 229/390 (58.72%), Query Frame = 0
Query:    1 MRGTGSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFAYPDFVGEGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKV--SRMRHAAVPGAACSCVLSSIFTLKQLRSIIYGLVVRSYLPSRDFCETVGLLCLHHEIQFSRCAPAVYSLPHVLHKLRLHTSPTRLYSTSCQRPCRPPWYRFLLRALRANITVEDIEIRFCDGDAAVVRGSTTVNIDAGRYDE-------EYLPWTIGRS--RGTGLIVDASTNVW-VRRHTIYDNGVAGLHIMNSNNFTFEATIDSDGSVGDGNVGSLDGQQPIEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCVIKTDEFSEVTIDAEEDELFFEDNCYVKV 378
            M+GTGSGA GF +LD   LG ++DNPSDTFYVG+T I++W G   PDFVG G+GDQ AI GAICAVKK +FDGVDC+  +E  TG V  S +R +    ++CS   SS    +++         R    SR     + L        F      +  +P       LH+ P    ++ C  P  PP +R +   L+ N+T E ++IR+C GDA VVR ST V+IDAGRYDE       +Y P    RS  R  GL + +  +V   RR     +G+   ++ +++           G  G GNVGS+DGQQPIE+I+E+S L+KFQD  VQSVNDPVMTI++ST VSFTN G S V +GTC I+ D+ S VTIDA+EDEL  E  CYVKV
Sbjct:  119 MKGTGSGAPGFAVLDPMVLGAKIDNPSDTFYVGSTFIEFWSGNGLPDFVGTGSGDQNAINGAICAVKKGTFDGVDCIDMDETATGTVDLSWVRTSWTATSSCSLAFSSSANRRRVDPRELSSRDRHRQQSRRIWPRIDLPLGCELPDFVVARLTLMEMPVTAFSASLHSLPK---ASLCLVPSVPPLHRSMPNTLQ-NVTCEGVDIRYCSGDALVVRDSTLVSIDAGRYDEHEGVPSVDYRPKPRHRSDSRHVGLRLSSPAHVTRQRRGGSPHHGLEQFYLRSNHRR---------GPEGAGNVGSVDGQQPIEVIVESSSLVKFQDKPVQSVNDPVMTITDSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495          
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 2.800e-59
Identity = 156/379 (41.16%), Postives = 198/379 (52.24%), Query Frame = 0
Query:    5 GSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFAYPDFVGEGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKVS-RMRHAAVPGAACSCVLSSIFTLKQLRSIIYGLVVRSYLPSRDFCET-VGLLCLHHEIQFSRCAPAVYSLPHVLHKLRLHTSPTRLYS--TSCQRPCRPPWYRFLLRALRA-NITVEDIEIRFCDGDAAVVRGSTTVNIDAGRYDEEYLPWTIGRSRGTGLIVDASTNVWVRRHTIYDNGVAGLHIMNSNNFTFEATIDSDGSVGDGNVGSLDGQQPIEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCVIKTDEFSEVTIDAEEDELFFEDNCYVKV 378
            GSG   F L+DAR LGT++DNP+DTFYVG+T I  W G   PDFVG+GTGDQ AI  AICAVKK ++DGVDCVG +++ TG V        V G     + S +F   + R       +  +L       T V  + +   I  +R              L +H     LY   TS   P  P      +  + + NIT  D  + FCDGDA VVR S+ VNIDAG YDE        ++ G  +    +      +  IY                             G VGSL+GQQPIE+I+E S L+ FQ+M V+SVNDPVMTIS+ST VSFTN G   V +GTC+I+TD+ S VTID +EDEL  E  CYVKV
Sbjct:  630 GSGGSEFPLIDARILGTKIDNPTDTFYVGSTFIPEWYGHGDPDFVGQGTGDQNAINAAICAVKKGTYDGVDCVGMDDSATGTVVLAFGEYHVDGNIF--MKSGVFLKGRYRFDDSPYNIDIFLEEGAPGNTDVDAMIVMDGISDARIGD-----------LWIHG----LYDPDTSNDSPAVPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYYDEY-------KATGWRVCTSWTPTTLPSKPPIYVGS-------------------------QGQVGSLEGQQPIEVIVEGSSLINFQEMWVRSVNDPVMTISDSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1442.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KFA6_9PHAE1.060e-10449.64F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FTH1_ECTSI4.630e-10451.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE1.740e-10348.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL74_9PHAE3.760e-9849.61F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FUI8_ECTSI1.370e-8444.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZZ4_ECTSI2.800e-5941.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 170..377
e-value: 5.7E-6
score: 27.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 195..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1442contigP-littoralis_Contig1442:5927..10880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1442.3.2mRNA_P-littoralis_Contig1442.3.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1442 4603..11529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1442.3.2 ID=prot_P-littoralis_Contig1442.3.2|Name=mRNA_P-littoralis_Contig1442.3.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=383bp
MRGTGSGADGFKLLDARFLGTQVDNPSDTFYVGTTRIQYWGGFAYPDFVG
EGTGDQKAIMGAICAVKKASFDGVDCVGGEEATTGKVSRMRHAAVPGAAC
SCVLSSIFTLKQLRSIIYGLVVRSYLPSRDFCETVGLLCLHHEIQFSRCA
PAVYSLPHVLHKLRLHTSPTRLYSTSCQRPCRPPWYRFLLRALRANITVE
DIEIRFCDGDAAVVRGSTTVNIDAGRYDEEYLPWTIGRSRGTGLIVDAST
NVWVRRHTIYDNGVAGLHIMNSNNFTFEATIDSDGSVGDGNVGSLDGQQP
IEIIIENSVLLKFQDMRVQSVNDPVMTISNSTGVSFTNTGLSRVETGTCV
IKTDEFSEVTIDAEEDELFFEDNCYVKVDTST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence