mRNA_P-littoralis_Contig144.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 328 bits (840), Expect = 6.060e-106 Identity = 184/415 (44.34%), Postives = 249/415 (60.00%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYE--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAHG-IGLEPLQLPVIPTG 1074
M KLL P GGMP+ +PE+ + +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E +F L NMDQTP+Q E+P +TT+EKTGAK A I+TGG+ EK R+T+VLAV DG+KV PRII+KG PF T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++ + T+++CF +CGLTL LDGSEDHAWC + FG++YR++L EQR W H + L PL+LP +P G
Sbjct: 1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG 413
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.010e-97 Identity = 182/440 (41.36%), Postives = 238/440 (54.09%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI-RDNYERSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIPT 1071
VM KLL P GG+ ++ +PE+ + +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+EKTGAK A I TG EK R+T+ LAV DG KV RII+KG PFV + G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+ + + K+ P RG VATW K W +I+ T+++CFK+CGLTL LDGSEDHAWC++ FGD YRE+L +QR EW H + L PLQLP +P
Sbjct: 87 VMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPA 525
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 295 bits (756), Expect = 6.280e-94 Identity = 173/420 (41.19%), Postives = 234/420 (55.71%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYE--RSGQKVTAPSRGLVATWVKEVWDNISERTIRS-----------------------------CFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQ 1005
M KLL P GGM + +P + + + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L A E +F L NMDQTP+Q EMP +TT+EKTGAK A I+TGG+ EK R+T+VLAV DG+KV PRII+KG PF+ +PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E + L A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+ S CFK+CGLTL LDGSEDHAWC + FG++YR++L EQ
Sbjct: 1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQ 418
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 298 bits (763), Expect = 7.850e-93 Identity = 180/418 (43.06%), Postives = 234/418 (55.98%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNY-ERSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEW-EQAHGIGLEPLQLPVIPTGDG 1080
VM KLL P GG+ + E+ + +F WY+RF +RH SIRR+TSVGQK P G+EG A+A + KLR++L E A E +F L NMDQTP+Q EMP +TT+EK GAK A I+TGG+ EK R+T+ LAV DG KV RII+KG PF+ NFGYP G+S GVQ+ SW D + W+++ + RP GS + QR S+LVLDDFR + T V+++ GGLTP+ QPLDR ++KE KR +R RYT ++ + K+ P RGLV+TW KE W I+ T++ CFKVCGLTL LDGSED AWC + FG+ YREVL +QR EW Q G+ L PLQLP + + G
Sbjct: 173 VMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEVSSASG 574
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 300 bits (767), Expect = 9.960e-93 Identity = 183/431 (42.46%), Postives = 242/431 (56.15%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYT----SWIRDNYERSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAHGIG-LEPLQLPVIPTG 1074
VM KLL P GGM + +PE+ + +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E +F L NMDQTP+Q EMP +TT+EKTGAK A I+TGGE EK R+T+VLAV DG+KV PRII+KG PF+ GG N P G + + SW D + + W+ + RP + S QRP +LVLDDF+CH++E F L AKT V+ + GGLT + QPLDR +NK+ KR +R +YT S + D RSG K+ P G+V+TW KE W++I+ +T+ +CFK+CGLTL LDGSE HAWC + FG++Y ++L EQ W H L PL+LP +P G
Sbjct: 182 VMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVAD--ARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWCEHNFGEDYGDLLEEQHAVWLAEHPDDTLPPLKLPKVPGG 607
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 290 bits (741), Expect = 1.080e-88 Identity = 166/378 (43.92%), Postives = 225/378 (59.52%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYE--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCI 963
VM KLL P GGMP+ +PE+ + +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL +L + A E +F + NMDQ P+Q EMP +TT++KTGAK A I+TGG EK R+T+VLAV DG+KV PRII++G PF+ T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH +E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W++I+ T+++C K+CGLTL LDGSEDHA CI
Sbjct: 194 VMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA-CI 569
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 282 bits (722), Expect = 1.470e-86 Identity = 174/425 (40.94%), Postives = 233/425 (54.82%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYE--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAW--CIYTFGDNYREVLREQREEWEQAHGIGLEPLQLPVIPTG 1074
VM KLL P GGMP+ +PE+ + +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E +F L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV DG+ V P II+KG PF+ T + G+PA G+S GVQ+ SW + + W+ + M RP + S QRP +LVLDDF+CH++E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++ RSG K+ P RG+V+TW KE W+ ++ T+ +CFK+CGLTL LDGSEDHA CI D + L PL+LP +P G
Sbjct: 154 VMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHACTPCIAEHPD------------------VTLPPLKLPKVPEG 558
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.780e-83 Identity = 182/518 (35.14%), Postives = 241/518 (46.53%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS------------------------WIRDNY---------------------------------------------------------------------------------ERSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIPT 1071
M KLL P GG+ ++ +PE+ + +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+E TGAK A I TGG+ EK R+T+ LAV DG+KV RII+KG PFV + G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGL P+ QPLDR +NK+ KR +R YT+ W ++ + + K+ P RG VATW K W +I+ +++CFK+CGLTL LDGSEDHAWC++ FGD YRE+L +QR EW H + L PLQLP +P
Sbjct: 155 MNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKPGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPA 670
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 268 bits (685), Expect = 4.600e-83 Identity = 139/313 (44.41%), Postives = 195/313 (62.30%), Query Frame = 1
Query: 208 QKLRSSLREHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYERSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIP 1068
+ L S + +F L NMDQTP+Q EMP +TT+EKTGAK A ++TGGE EK R+T+VLAV DG+KV RII+ G PF+ T + G+PA G+S GVQ+ SW D + + W + + RP + S QRP +LVLDDF+CH++E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++ + K+ P RG+V+TW K W++I+ T+++CFK+CGLTL LDGSEDHAWC + FG++YR++L EQ W H + L PL+LP +P
Sbjct: 33 EDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP 344
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 271 bits (694), Expect = 1.980e-82 Identity = 167/415 (40.24%), Postives = 220/415 (53.01%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTG-GETEK--------------LRYTVVLAVRGDGQKVRPRIIYKGNP---------FVGGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS-WIRDNYERSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIPT 1071
VM KLL P GG+ ++ +PE+ + +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E +F L NMDQTP+Q EMP +TT+EK GAK A I TG GE + R VR + RP F + G P GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+ + + + P RG VATW K W +I+ T+++CFK+CGLTL LDGSEDHAWC++ FGD YRE+L +QR EW H + L LQLP +P
Sbjct: 149 VMNKLLELKPDALGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRLASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGSPWEACPSGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPA 562 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig144.78.1 >prot_P-littoralis_Contig144.78.1 ID=prot_P-littoralis_Contig144.78.1|Name=mRNA_P-littoralis_Contig144.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=360bp MAKLLSEMPTFSGGMPSQDEPEKMEKIQKRFNAWYYRFLKRHRFSIRRKTback to top mRNA from alignment at P-littoralis_Contig144:217972..219749- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig144.78.1 ID=mRNA_P-littoralis_Contig144.78.1|Name=mRNA_P-littoralis_Contig144.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1778bp|location=Sequence derived from alignment at P-littoralis_Contig144:217972..219749- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig144:217972..219749- >mRNA_P-littoralis_Contig144.78.1 ID=mRNA_P-littoralis_Contig144.78.1|Name=mRNA_P-littoralis_Contig144.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1080bp|location=Sequence derived from alignment at P-littoralis_Contig144:217972..219749- (Pylaiella littoralis U1_48)back to top |