prot_P-littoralis_Contig144.33.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig144.33.1
Unique Nameprot_P-littoralis_Contig144.33.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length115
Homology
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BLAST of mRNA_P-littoralis_Contig144.33.1 vs. uniprot
Match: A0A6H5KHU9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHU9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.650e-10
Identity = 40/106 (37.74%), Postives = 52/106 (49.06%), Query Frame = 0 
Query:   20 GLVSMMDRECLLAMLSAHAAVDSRR------GVGEFGGNKE------------SGDGGGLPKGFLARLASAVDLQGAVADDRPSPEPPDFPHCSASDLRLPKHYNE 107
            GL+SM+D+  L++ML A  AV+  R      G+GE                     GGGLP      LA   D+   + + RP  + PD PHC ASDLR+PK YNE
Sbjct:  564 GLISMLDKNTLVSMLEAQRAVEEERREPGGAGIGEXXXXXXXXXXXALAAVGLGAGGGGLPLVCATLLADREDIDAMLRNQRPPKQRPDLPHCQASDLRIPKSYNE 669
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHU9_9PHAE2.650e-1037.74Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig144contigP-littoralis_Contig144:91776..96751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig144.33.1mRNA_P-littoralis_Contig144.33.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig144 91607..97299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig144.33.1 ID=prot_P-littoralis_Contig144.33.1|Name=mRNA_P-littoralis_Contig144.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp
MLAEAPPEIDDDDDLSGQMGLVSMMDRECLLAMLSAHAAVDSRRGVGEFG
GNKESGDGGGLPKGFLARLASAVDLQGAVADDRPSPEPPDFPHCSASDLR
LPKHYNEGCGCRVF*
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