mRNA_P-littoralis_Contig1435.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 253 bits (647), Expect = 8.450e-76 Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRSTP 372
MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDK+ P
Sbjct: 501 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYP 624
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: D7FZS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS5_ECTSI) HSP 1 Score: 228 bits (581), Expect = 5.480e-73 Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRSTP 372
MTVGKQHDGYWTSDRMCAQLPAAIA FEL++GPHRQGV IFDNSTGHN YDDDALLAHK+SLAPGGEK ALRVFEDDNG+TVHPT Q+G TLLTDKKIFLPKTEAQ+K KGRKFGTGLDK+ P
Sbjct: 1 MTVGKQHDGYWTSDRMCAQLPAAIATFELTHGPHRQGVSIFDNSTGHNTYDDDALLAHKMSLAPGGEKTALRVFEDDNGRTVHPTPQLGGTLLTDKKIFLPKTEAQEKTKGRKFGTGLDKKQYP 124
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 230 bits (586), Expect = 5.400e-67 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRSTP 372
MTVGKQ DGYWTSDRMCAQLPAA+A FEL+NGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEK ALRVFEDDNG+ VHPTFQ GDTLLTDKKIFLPKT QKK+KGRK GTGLDK+ P
Sbjct: 553 MTVGKQQDGYWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKHGTGLDKKQYP 676
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.380e-57 Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKRSTP 372
M VG+QHDGYWTSD MCAQLPA IAM EL++GPHRQGVFIFDNSTGHN YD DALLAH I+LAPGGEK ALRVFED +GK V+PTFQ+GDTLLTD+KIFLPKTE QKK K RK GT LDK P
Sbjct: 368 MPVGQQHDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFP 491
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE) HSP 1 Score: 152 bits (383), Expect = 1.690e-39 Identity = 77/121 (63.64%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKR 363
MTVG+QHD YWTSDRMCA+LPA IAM EL++GPHRQ V IFDNSTGHNAY +DALLAHKI++APGGEK ALRVFEDDNG TV +KK K RK GT LDK+
Sbjct: 360 MTVGQQHDRYWTSDRMCARLPAIIAMVELTSGPHRQDVLIFDNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNTV-----------------------EKKQKERKNGTALDKK 457
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.270e-28 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ 318
MTVG+ DGYWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D ++ KT Q
Sbjct: 91 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQ 196
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.570e-28 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ 318
MTVG+ DGYWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D ++ KT Q
Sbjct: 524 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQ 629
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5JRU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU6_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.730e-27 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ 318
MTVG+ DGYWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D ++ KT Q
Sbjct: 264 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILD-FLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQ 368
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 117 bits (294), Expect = 4.200e-27 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIF 297
MTVG+ DGYWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D ++
Sbjct: 978 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLLDTHVY 1076
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 112 bits (281), Expect = 9.220e-26 Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 1 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQK---KMKGRKFGT----GLDKRSTPSE 378
+ VGK DGYW +R+C QLPA A FELS P RQ + +FDNSTGHNA+ DAL A I+L+ GGE+ FE NG+T++ TFQ+GD L F KTE +K K G+K G + ++ TPSE
Sbjct: 177 LRVGKNLDGYWDCNRLCVQLPAIFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEY-NGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSE 308 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1435.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1435.8.1 >prot_P-littoralis_Contig1435.8.1 ID=prot_P-littoralis_Contig1435.8.1|Name=mRNA_P-littoralis_Contig1435.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYback to top mRNA from alignment at P-littoralis_Contig1435:14499..15091+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1435.8.1 ID=mRNA_P-littoralis_Contig1435.8.1|Name=mRNA_P-littoralis_Contig1435.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=593bp|location=Sequence derived from alignment at P-littoralis_Contig1435:14499..15091+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1435:14499..15091+ >mRNA_P-littoralis_Contig1435.8.1 ID=mRNA_P-littoralis_Contig1435.8.1|Name=mRNA_P-littoralis_Contig1435.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig1435:14499..15091+ (Pylaiella littoralis U1_48)back to top |