prot_P-littoralis_Contig143.105.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig143.105.1
Unique Nameprot_P-littoralis_Contig143.105.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length128
Homology
BLAST of mRNA_P-littoralis_Contig143.105.1 vs. uniprot
Match: D8LC34_ECTSI (Transmembrane protein 138 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC34_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 3.880e-57
Identity = 97/117 (82.91%), Postives = 102/117 (87.18%), Query Frame = 0
Query:    5 VSRNATTTTGGDSILFKLKLFIMVFLMVFDMGLNSSVEHETFGTWDHGEGDDTILALILGFQLVVQVGTFASLFLMMFETYPFRVGLMGMLTSQYLTVYVINVVYFVMTICVYGYRV 121
            V+RNA+ TTGGDSILF++KLFIMVFL V DM LNSSVEHETFGTWD    D T L LILGFQLVVQVG FA LFLMMFETYPFRVGLMGMLTSQYLTVYVINV+YFV T CVYGYRV
Sbjct:    4 VARNASVTTGGDSILFRVKLFIMVFLTVVDMTLNSSVEHETFGTWDGTGRDGTALVLILGFQLVVQVGNFACLFLMMFETYPFRVGLMGMLTSQYLTVYVINVLYFVTTACVYGYRV 120          
BLAST of mRNA_P-littoralis_Contig143.105.1 vs. uniprot
Match: A0A6H5JIR8_9PHAE (Transmembrane protein 138 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR8_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.970e-56
Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    5 VSRNATTTTGGDSILFKLKLFIMVFLMVFDMGLNSSVEHETFGTWDHGEGDDTILALILGFQLVVQVGTFASLFLMMFETYPFRVGLMGMLTSQYLTVYVINVVYFVMTICVYGYRV 121
            V+RNA+ TTGGD ILF++KLFIMVFL V DM LNSSVEHETFGTWD    D T L LILGFQLVVQVG FA LFLMMFETYPFRVGLMGMLTSQYLTVY+INV+YFV T CVYGYRV
Sbjct:    4 VARNASVTTGGDCILFRVKLFIMVFLTVVDMTLNSSVEHETFGTWDGTGRDGTALVLILGFQLVVQVGNFACLFLMMFETYPFRVGLMGMLTSQYLTVYIINVLYFVTTACVYGYRV 120          
BLAST of mRNA_P-littoralis_Contig143.105.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.580e-18
Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = 0
Query:   14 GGDSILFKLKLFIMVFLMVFDMGLNSSVEHETFG--TWDHGEGD-DTILALILGFQLVVQVGTFASLFLMMFETYPFRVGLMGMLTSQYLTVYVINVVYFVMTICVYGYRVLR 123
            GG    F+ KL +++ LM+ D+ LN SVE++++   T D G  D DTIL L+ G QL+VQV    +LF+MMF+T+PF+ GLMG++   Y  VY +N  Y   T  +YGYR+ +
Sbjct: 1288 GGADAWFQAKLTVLMLLMLADVLLNGSVEYDSYSQLTLDGGGDDVDTILVLVHGVQLLVQVAVLLTLFIMMFDTWPFKAGLMGLVAVHYKWVYAVNGAYITATALLYGYRLAK 1400          
BLAST of mRNA_P-littoralis_Contig143.105.1 vs. uniprot
Match: A0A7S4E2F6_9STRA (Transmembrane protein 138 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2F6_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.960e-5
Identity = 31/99 (31.31%), Postives = 59/99 (59.60%), Query Frame = 0
Query:   23 KLFIMVFLMVFDMGLNSSVEHETFGTWDHGEGDDTILALILGFQLVVQVGTFASLFLMMFETYPFRVGLMGMLTSQYLTVYVINVVYFVMTICVYGYRV 121
            K  I+  L++ D+  NS++E++    WD           + G Q+ +++ TFA +FLM+ ETYPFRVGL+  L +++ +++ ++ +Y   ++ V  YR+
Sbjct:   28 KTIILFGLLLTDLVFNSTLEYDE---WDS-------YPTMFGIQVFIEICTFAVVFLMLCETYPFRVGLLDALLAEFRSIFWVHPLYVCWSLLVGIYRI 116          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LC34_ECTSI3.880e-5782.91Transmembrane protein 138 n=1 Tax=Ectocarpus silic... [more]
A0A6H5JIR8_9PHAE2.970e-5681.20Transmembrane protein 138 n=1 Tax=Ectocarpus sp. C... [more]
A0A836CBT6_9STRA2.580e-1844.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4E2F6_9STRA2.960e-531.31Transmembrane protein 138 n=1 Tax=Pelagomonas calc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024133Transmembrane protein 138PFAMPF14935TMEM138coord: 65..122
e-value: 1.0E-6
score: 29.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:418684..422111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.105.1mRNA_P-littoralis_Contig143.105.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig143 418585..422689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig143.105.1 ID=prot_P-littoralis_Contig143.105.1|Name=mRNA_P-littoralis_Contig143.105.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=128bp
MRPGVSRNATTTTGGDSILFKLKLFIMVFLMVFDMGLNSSVEHETFGTWD
HGEGDDTILALILGFQLVVQVGTFASLFLMMFETYPFRVGLMGMLTSQYL
TVYVINVVYFVMTICVYGYRVLRRYTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024133TM_138