prot_P-littoralis_Contig143.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig143.61.1
Unique Nameprot_P-littoralis_Contig143.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length297
Homology
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BLAST of mRNA_P-littoralis_Contig143.61.1 vs. uniprot
Match: D8LC15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC15_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 3.870e-110
Identity = 180/296 (60.81%), Postives = 208/296 (70.27%), Query Frame = 0 
Query:    1 MSPLRTVCFAVGVVATATAAVAPGTPVYSLQGGGSGLETEGDYLENKIARGVYGATGNVFGAXXXXXXXXADEAKQDYRAAKSAARXXRESTRDAXXXXXXXXXXXXXNVXXXAMSARDSVHIPNKIGWPFDDKTVEDAKPKLSWSGGGAKQMVVDDRHAVFKFLSNPNNVFVAQGVLALVFGVVHLAKYDAFVSKFAGPVCRLFGLDWAAGAVGPHVKLVGAYLAGVLVSDVLAYKSNSAGFKRGKIWHEMGSCIAISAVCITDLFSAEQPADVVPHAIVAFLFAAWYSYLSKQY 296
            M+P+R  C   G+ A+ TA   P +PVYSLQGGGSGLET+GDYLENKIARGVYG+               ADEAKQ  +A                       XXXXX  XXX    R+SVHIP KIGWPF++K  E  +PK+SW GG AKQ+V D+R A+ KF+ NPNN FVAQGV AL+FG +HLAKYD FV K A P+C LFGL+W  G VGP++KL+GAYL GV  SDVLAYKSNSAGFKRGKIWHEMGSCIAIS +CIT +FS E PADVVPHAI AF+FA WYSYLS+QY
Sbjct:    1 MAPMRVACLVAGLAASTTAVHVPESPVYSLQGGGSGLETKGDYLENKIARGVYGSIDTTTKGVVGVFGLAADEAKQANKAXXXXX------------------XXXXXXXXXXVKHVRESVHIPTKIGWPFEEKAPE-PQPKMSWVGG-AKQVVADERTALKKFIGNPNNAFVAQGVTALLFGGLHLAKYDQFVGKLAQPLCSLFGLEWGPGTVGPYMKLIGAYLVGVFFSDVLAYKSNSAGFKRGKIWHEMGSCIAISTLCITQMFS-ETPADVVPHAIAAFVFAGWYSYLSQQY 275
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC15_ECTSI3.870e-11060.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:229844..236999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.61.1mRNA_P-littoralis_Contig143.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig143 229777..237890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig143.61.1 ID=prot_P-littoralis_Contig143.61.1|Name=mRNA_P-littoralis_Contig143.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
MSPLRTVCFAVGVVATATAAVAPGTPVYSLQGGGSGLETEGDYLENKIAR
GVYGATGNVFGAFGAVGAAAADEAKQDYRAAKSAARAARESTRDAARSAR
ESARESVKNVKDAAMSARDSVHIPNKIGWPFDDKTVEDAKPKLSWSGGGA
KQMVVDDRHAVFKFLSNPNNVFVAQGVLALVFGVVHLAKYDAFVSKFAGP
VCRLFGLDWAAGAVGPHVKLVGAYLAGVLVSDVLAYKSNSAGFKRGKIWH
EMGSCIAISAVCITDLFSAEQPADVVPHAIVAFLFAAWYSYLSKQY*
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