mRNA_P-littoralis_Contig143.61.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig143.61.1
Unique NamemRNA_P-littoralis_Contig143.61.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig143.61.1 vs. uniprot
Match: D8LC15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC15_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 9.660e-106
Identity = 180/296 (60.81%), Postives = 208/296 (70.27%), Query Frame = 2
Query:   68 MSPLRTVCFAVGVVATATAAVAPGTPVYSLQGGGSGLETEGDYLENKIARGVYGATGNVFGAXXXXXXXXADEAKQDYRAAKSAARXXRESTRDAXXXXXXXXXXXXXNVXXXAMSARDSVHIPNKIGWPFDDKTVEDAKPKLSWSGGGAKQMVVDDRHAVFKFLSNPNNVFVAQGVLALVFGVVHLAKYDAFVSKFAGPVCRLFGLDWAAGAVGPHVKLVGAYLAGVLVSDVLAYKSNSAGFKRGKIWHEMGSCIAISAVCITDLFSAEQPADVVPHAIVAFLFAAWYSYLSKQY 955
            M+P+R  C   G+ A+ TA   P +PVYSLQGGGSGLET+GDYLENKIARGVYG+               ADEAKQ  +A                       XXXXX  XXX    R+SVHIP KIGWPF++K  E  +PK+SW GG AKQ+V D+R A+ KF+ NPNN FVAQGV AL+FG +HLAKYD FV K A P+C LFGL+W  G VGP++KL+GAYL GV  SDVLAYKSNSAGFKRGKIWHEMGSCIAIS +CIT +FS E PADVVPHAI AF+FA WYSYLS+QY
Sbjct:    1 MAPMRVACLVAGLAASTTAVHVPESPVYSLQGGGSGLETKGDYLENKIARGVYGSIDTTTKGVVGVFGLAADEAKQANKAXXXXX------------------XXXXXXXXXXVKHVRESVHIPTKIGWPFEEKAPE-PQPKMSWVGG-AKQVVADERTALKKFIGNPNNAFVAQGVTALLFGGLHLAKYDQFVGKLAQPLCSLFGLEWGPGTVGPYMKLIGAYLVGVFFSDVLAYKSNSAGFKRGKIWHEMGSCIAISTLCITQMFS-ETPADVVPHAIAAFVFAGWYSYLSQQY 275          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC15_ECTSI9.660e-10660.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:229777..237890 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1849
Hectar predicted targeting categorysignal peptide
Exons6
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-20_004070.1
Cds size891
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.61.1prot_P-littoralis_Contig143.61.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig143 229844..236999 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789673.127551-UTR-P-littoralis_Contig143:229776..2298431680789673.127551-UTR-P-littoralis_Contig143:229776..229843Pylaiella littoralis U1_48UTRP-littoralis_Contig143 229777..229843 +
1680789673.2146747-UTR-P-littoralis_Contig143:236999..2378901680789673.2146747-UTR-P-littoralis_Contig143:236999..237890Pylaiella littoralis U1_48UTRP-littoralis_Contig143 237000..237890 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789673.1380422-CDS-P-littoralis_Contig143:229843..2299361680789673.1380422-CDS-P-littoralis_Contig143:229843..229936Pylaiella littoralis U1_48CDSP-littoralis_Contig143 229844..229936 +
1680789673.1484056-CDS-P-littoralis_Contig143:233576..2338361680789673.1484056-CDS-P-littoralis_Contig143:233576..233836Pylaiella littoralis U1_48CDSP-littoralis_Contig143 233577..233836 +
1680789673.1638625-CDS-P-littoralis_Contig143:234708..2348381680789673.1638625-CDS-P-littoralis_Contig143:234708..234838Pylaiella littoralis U1_48CDSP-littoralis_Contig143 234709..234838 +
1680789673.1781254-CDS-P-littoralis_Contig143:235239..2354121680789673.1781254-CDS-P-littoralis_Contig143:235239..235412Pylaiella littoralis U1_48CDSP-littoralis_Contig143 235240..235412 +
1680789673.190213-CDS-P-littoralis_Contig143:236309..2363941680789673.190213-CDS-P-littoralis_Contig143:236309..236394Pylaiella littoralis U1_48CDSP-littoralis_Contig143 236310..236394 +
1680789673.2023206-CDS-P-littoralis_Contig143:236849..2369991680789673.2023206-CDS-P-littoralis_Contig143:236849..236999Pylaiella littoralis U1_48CDSP-littoralis_Contig143 236850..236999 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig143.61.1

>prot_P-littoralis_Contig143.61.1 ID=prot_P-littoralis_Contig143.61.1|Name=mRNA_P-littoralis_Contig143.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
MSPLRTVCFAVGVVATATAAVAPGTPVYSLQGGGSGLETEGDYLENKIAR
GVYGATGNVFGAFGAVGAAAADEAKQDYRAAKSAARAARESTRDAARSAR
ESARESVKNVKDAAMSARDSVHIPNKIGWPFDDKTVEDAKPKLSWSGGGA
KQMVVDDRHAVFKFLSNPNNVFVAQGVLALVFGVVHLAKYDAFVSKFAGP
VCRLFGLDWAAGAVGPHVKLVGAYLAGVLVSDVLAYKSNSAGFKRGKIWH
EMGSCIAISAVCITDLFSAEQPADVVPHAIVAFLFAAWYSYLSKQY*
back to top

mRNA from alignment at P-littoralis_Contig143:229777..237890+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig143.61.1 ID=mRNA_P-littoralis_Contig143.61.1|Name=mRNA_P-littoralis_Contig143.61.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8114bp|location=Sequence derived from alignment at P-littoralis_Contig143:229777..237890+ (Pylaiella littoralis U1_48)
ATCGTTCTCTGACCTTTTTTTAGCACCCGTACAAGTACCAGCAGCGCTAA CCACATCTTTTGAGACAATGTCGCCTTTGAGGACAGTATGTTTCGCGGTG GGCGTGGTGGCCACAGCTACTGCGGCGGTCGCGCCCGGAACACCCGTCTA CTCCCTTCAGGTATGATGTGTGTGTAGGTGTGACCTTTCGAGCACGATCT ACACGAAAGGTGTTCATGCGCTGTATGCTTCAGTTCAGAGACAGCAGCTG CTGTAGGATCTTCTTTTAAACCAATAAAACAAAGACAAACAGGTACAAAG GTAGATCATTCCTTCGCGAAAAATAACCAGACACTTTTGACTAGATTTTC TCACTTCAGTACAAAGGTTTTCGTCGATCGCGATGTCGTCGTGCACCGAT TAAGCGAACCGCGCAGCATGGTTGCTCGGTGCGCGCTCATCGTCGGCTAC GGTGCCTACATAAGGTTTCACAGCACACACCAGCTGACGAAAATCTCTGT AGCAGCTTGCTGCAGCACGGCCGGCTGCCTCATGCAGCTGCCTCATGCAC GTGTGTCTTGGGGAGCGCTTTTGGTCGAAGTTTGTCCGCTTCGATAAAAC TATGTACCTGGGTACTCTGTAGTATACTCGGAGATAAAACAAAACAGGCC GGTGCTTTTGCTTGTGGTATGATAGTTGTGGTATACGAAGTATATGGCCG TCCTAGGAGAGGCGCAGATAGACGGGCTTCAATGGCTACTGCTGCTGAAA GCTGCGGGGCATGGCTGCGAGAAGTCTTGGAGGCGTCCGAACGGACAGGA ATGCCATGCAACCAAACAAATTCGAAAAATTCTAGAAAAATTCGAAAGAG TTGGAAAATAAGGAAAAGTTAAAAATTTGAAAAATTCGAAAAAGTTGGTT GATTGATGGTATTATGCACTGATACATACCTGGTACTCCGTATATATCGT GCTTTTATATAAACCACCTGGTGCCACATGAAACCTGTTGCCTGGTGGTC CGGCAGCATGTTTATGAGTACAATAGTGCGACAGGGCCACGACAGCACGT ACGAATAATTACTCGAAGTACTGCTACGCTTGTTTGTACAAGTAGACCAC GTGACCCATGTATAATATTTATTCCCACGATCATGATACTCCGTATATAT CATCCCCATAATATTAGACCTAGGTGCGGAATATGTATCATATCTCAAAC GTATTCACGTTCAGTATATTACGTATTACACGCATATCGGGGCGACACGA AGAGCTCTCGAGGCGCTTCCCCGTGAGGTCGCTTACAGCAGGAAGTATAA TACTCCGAGTATCGTAAAGGACACAAGAAGCCTCTCCTACTTTTTCCTGT CTGTGTACCTATGCGGCACGCTTCATGATCACAAAGTACTGCTGCTGTGC TGCTGTATACTCCGGAGTACAAGGTTAATTGCTTTCGTATTACATGATAC ATTAGTCTCTTTTTTTCTTTTCCCTTTTCGTTCCCCTGCTTCCTCTTTGT TTGGGGGCCTGTTTGTTGTGTTTGTGTACGAGTGCACTCCCTCAGTCTTT GTGCACTCCCTGTATCTTCTTTTTTATTTTTTTGTATGTTCTTTTTTATT TTTTTGTCTTTCGTCTATTGATGATACAGTTACTGGACCATTACCCTGGT TTGCCTTTGCCTTGGTCTGTCATGGCCCTGGGCCCTGGTTCGATGTACGA AGCACTTCGAAGTAGTATATGGTTATGGTTGAGGTTTGTCTTGATCATTT TTTGTTTGTCGGACTGTTTCCAATTTTTGTTTTTGTTTCTTTCGAGCCTG TTATTTTTTTTCTTGTTTTGTGAGGTACTCTGGCCACCACAGATGGTACC CCAACGGTACCATATCTGATTTGACTGTTGGTGATCATAGTCCATATATT TTATTTTTATTTTTTTCCTCCTAGGATGATATGTGCCTGGTTTGTGACCA CGGGCTAGACTGCGGCGGTACTGTAGTGAGCTAATGTGAGAATCAACAAC AACAACAACAACAACAACAACATTATGAACATTCGCAAAACGTGTTGAAC TTCCTCGTTTGACCCCGGATGGTGCGCTAAACTTATTCTGCCCACATGAC TTGTACAGAGAGAGGTGTATTTGACACTGGCGTCCAACAAAAAAATGACG CCTCTCGAAGGCACTACCTACGTATGATATGATACGTGCCTCACCTTCTT GCCTTTTCGACGGGACTTCTCGAGGGAAAAAATACAAATTTGAAGTACCT ACCAAAAAATGGGAATGATTCTTCTTGTACCTACCTGTGGTAGAACTGAT ATTCCGATACACACAGCGTACCGGCCCACTGACAAGAAACACCTATTTTG AGCGAGGCTCAAAACCTTATCTTGTCCCACCGATCAAAGGCTTTTTCTTA TCCAATACTGTACTCCAAAGTATTATATTGGATTTAATGTTGCGCTACTT TGCCGCTGAGCCCAGTTAGGCCAATTTTTTTTTAGAATCTGAGGCTGGGT TTCTTATGAAAATGTTTCTTATGAGCCGGGCCGGTACTACTACTACTGCT GTTGATGTGTGTGCTGGGGGTAAGACGTCCAGACGTACATCATGTGCACC ACCAGGTATTATGTGTGTATATGCGCATCATACATCATCCTCTCAAAACC TTCTGGACTCGGTACCCATGCGTCTCAAGTTTTCACCTCCAATGATGAAA GAAAGTGTGGTGGGTCTACTTGCAGCATTTTTCTTATAAACACAGACGAC ATCGGATACAAAAAAAGGTGGTCAGTACGAAGTACTTCGTATCAGATAGC AACGGACACAGAGCAACGGACACAGAGAGCACCATCTCATTTGCATGTGT TTCCATCATACAACTCATCAGACAACATATCATACATACATTCAGAGCGA ATTTCGAAACGCATCAAAAATGGAATATCCTCTGGAGCTTTAGTTTATAC TTCGTACTGCTGTATACTTGTATAGAATACACTACTGTATCGCCCCGGTG GACTAGTGGTCCCCTCGTTAGCCACTAGGTGCAGAGGAACGGGGGTTCGA TTCCCGGTGAATGTGTTCCTTTGCTACTTTGAAAGCGGCTACGCTGTTAG TAAAATCAGATTCGGCTTCGCCGACGAGGGTAGGGACCGCGGATCCCTGC TCGCGAGAAAAAATCTCACGCATGTACCGCAGAAGGAAGGTGGGGGTAAC TCCTCCTGTTTTGACCTTCCTCCTGTGTGACCCCGTCGATGGGCCTAGCC TGTAGTTTGAACCGCAGGGTGCAGACCAGTGTGCCAGAGAATATGGGATG ACAACACACATAGATACCATTGATTGCAGCTCCCTGAGCTGAGGGTAGTT TTTTCGTTATTCTTGTTTGATACGAGTATTCATTCGAAATCCGCTCCCAT TTTCCAGAATAATCCCCCCCCGTTTTTCGTCGACCACGTCTCCTTGTACG TACAAAAAACTCTGTTGACGAGAGGAGGATAACCAAATCAAACTGCTCTT AGTGTCTTAGCTTGTGCATGTTGGCCTGCCTCATTCATGATCGGGCGAGC TGAACATTTTCCTGAATTATTTGTTGTGGTTTTGGCCTCCAAAGAAAATA CTCCTTGAAGTCCTTCGTCATTATACTGGAAACAAACCGAGAAACGGCCC TCTAACCTTCGCTTCACCCATGAACACACACACACTTCACACGCGCGCGC ATACGCGCGACACGGCTCACCAAATTATAAACGGAATTCCATCTGATACC CACAACACCCACAACCGTATTTGTGTGAACTACTATGTTATGTACATCAG GGCGGCGGAAGCGGATTGGAGACGGAAGGCGACTACCTGGAGAACAAGAT CGCGAGGGGGGTCTACGGCGCCACCGGAAACGTGTTCGGAGCTTTCGGGG CCGTTGGTGCCGCCGCCGCGGACGAGGCCAAGCAGGACTACAGGGCCGCC AAGTCCGCGGCTAGGGCTGCCCGGGAATCGACACGAGACGCCGCCAGATC CGCCCGAGAATCTGCCCGAGAATCTGTGAAGAACGTCAAGGACGCGGCCA TGAGCGCTCGGTAAGCTAAATACTGACCACATATCGAGAGCTGTTTGTGT GATACTCTTCAGTGATGACTACCAATATCATGCGAGTCATCGCACCCCCG TGTTAGCTTTTTTGCATTCCGTATTGCTCCACAACCAGGAGAGTACCACT GCCGAAAAGGGTGTTTTTGGAAAGATCTCGTCGAGAGCTTTCGTATGACG GGTCGTTTGGTGTTCGCACTCTCCTGGTTATGGAGCAATACGGAATGCAA AAAAGCTAACACGGGGGTGCGACGACTTGCATGATTACGGTATCTTCTTA CTACTTCTCCGGCCGATACGTGTTTTTGTATTTATGATATCATATTACTT GTTGTGTCAACAGCTAAGAAAAGGCCTCCTTTCCCGAGAAGAATGCTCAT TCATACTGTATAGATCCTCATTGATCTGTTCCTGCTGTGGTGTGGCGAAA TATCTATCTGCGGGGTGTGTACCGCGCGCGCAGGTAAGTTATTCGTTTCA GCCGGCAGAATGGAAGCCCTTGGCAGTGTTGATCGATAATCTGTTTGAAC GTATGATACATGCGCATGATGCAGACATACGTACATACATACAAACAGCA GTACCCGTGTGCTGATCAGATGCCTCCTTCTTCTCCATGCTGTTTTTCGT GCTGTTTTTACTCGCGTCCCTCTGTCGCATTGTTTAGCTCTTTGTTTGCC GAGATGGTGCACACACGCACACATACCGTGCTGATGATGATGATGATGAC GGCGGAGCTTGCAAGTTCGCCCATGACATGTGATGGTGCCGATCAAACTT ACCCCCCTCGGTTGCTTGTCATCGTGTGTCTTTCCTGGGCGTTTGTTGGT CCCGTAACGTGTTGCATGCGTTTGTTCATCAGGGATTCCGTCCACATTCC TAACAAAATCGGGTGGCCTTTCGACGACAAGACCGTCGAGGATGCCAAGC CCAAGCTCTCGTGGAGCGGCGGGGGGGCCAAGCAGATGGTCGTCGACGAC AGGCACGCGGTGGTGAGCGTCACGAGTGTGTCCTGAGTGTCCTTTGACTG AAGAAAGTATTGTCTCTACAACTGTTGGGTGCGGAATCATTCATTGTATT TGGTTTAAACAGCGACAGCAGTAAGCACTATGATAAACCTGCACTGCACC GCTCTTGTTTATTCCGCCCCTGTTTTGGACCCTCTTGCAGAAGGAGGAAA ATACATTGAGATGTATTTACAGAGTAGCGAAAAACCCGCCTATTTCGTGT TATCATTTACAGAGTGCCATAGCAAAAAGGTACCCGTTTTATTTTATTTT GCTGCAGTCTCCTTGTGTCCTCACCATCGTCGGTCTCTCTCTCGCCCCCC CCCCTCCCCCTTACTACCCCCCTCCCCCCCCCTACGCCCGCCCGCTCCCC CACACATTTTCAGTTCAAGTTCCTCTCCAACCCGAACAACGTATTCGTGG CCCAGGGTGTGCTCGCTCTCGTGTTCGGTGTCGTTCACCTCGCCAAGTAC GATGCGTTCGTGAGCAAGTTCGCCGGGCCGGTGTGCAGGCTCTTCGGCCT AGACTGGGCGGCGGGGGCGGTCGGTCCTCACGTCAAGTGAGAAACGAGAT GCAGCGATAATTAGTTATTGATGCATCAACGAGCACGGGGATGGTAATGA GTTGCTTGTTGTGTGTGCGTGATGTATGTATGTACGAAAGCATGTATGTA GCTTCGACCCTCACGCCAAGTGAGATACACACAGATAGATGAAGACCCAT TTAAGCCCATCGTGAAGGAACGGCCTGTCTTGGCGTGCAACCACCCTGAA GGCATCGAGAACGGATATGACCGACCCCTGTTTCTTGTAGACGACGTGCT CCACCCGTCGGTCCTTTATAAGTGCGCCTCAGACTTCATCACATTATTTT TATTGGATGTTGTCGATCATACGAAGTTGTCATCTTTTTCAGATTGATCG CTTGTGTTTGTACTTGTAAGTAGTACTTCAGCGTGCTGTGCGTAATAGTA TGTCGTTGGTTGCGTTCGACATCATCCAATGCACGCGCTAACGGCTGACC AATCAACAACGTGGCACGCCCGTAGACTACCATATGCCTTTGTTCTTAGC GGGGTGAAACTCAAGGAGCAGTAATACGCCTCCCCTCCCCAGTAATGCCA CCTCGGGTGGTTTCCCCGAATTATTTGTCCTGTGTTCACAAGATGCTTCT CGTGGCTTTTCGTTTGCTTCAATGCTTTTTGTTTGCTTGTTTATTTTGTG CTGCATGAGAGCGAGGTGCGTGTTCTTGAGTTTTGCTTGTTTCTTTTGTG CTGCATGAAAACGAAGTGCGTGTTTTTGAGTTGGGGTATCAAAGAATGAC GCCCGTCTTTTTCCCATCATGAACACCCATCCAATCGGGTCCTCCCCCAG ATTTTTTTTATTGTGGATTGTCGCCAATAGGTACAGTAGGGTGTCTTGAT ATATATCTCGTGTATGTTCTCGTGTACATCCAGGTTGGTGGGCGCTTACT TGGCAGGCGTTCTTGTGTCCGACGTGCTGGCGTACAAGTCCAACAGCGCC GGCTTCAAGCGCGGAAAGGTGCGCGACGGAGACAGACTTACATGGTTTTT ATCCATTTCAGAAGGCAACTTTTACGTGGACGTCAACGATTGAAGAATCG GGGTGGTGGGGGAGAAGTGAGGGCAGAGATTTATTGATTTGTTTCAGAAG GCGGCGTTTCTTACTATTGCGTGAGGTTGGGTGCTGGGGGACATCAGGCA GGGCTCTGTCTACGTCGAGGTCATAGTGCCGGCCCGATCATAAGTCGTAA CCTCCCCTTTTCGACGTACTGGTCCCAAAGAATACGTATGTCGTTTTTGT TTTTGATCACTTCTGATTTTTACGAAACTATGTATCATTCATGTTCGACG ACGATTCATTCTGTGACGATGTGTAAATAAAAATAAACCCTATTTCTTTG TATAGACTATGCTTTCAAGGTATTTTTTGAATGACCTCATTCGATTCCTT TCGGTTGTTGCTTGTCGATTCAGATCTGGCACGAGATGGGCTCTTGCATC GCCATCTCGGCCGTGTGCATCACGGACCTCTTCTCGGCGGAACAGCCGGC CGATGTCGTGCCCCACGCCATTGTTGCCTTCCTCTTTGCCGCCTGGTACT CCTACCTCTCTAAGCAGTACTAACCGATGCCATGAAAAACAAAATCGTCC CAGAATCGTCCCAAGAGTTGACAAAATGACTGGTTGGTTGGGTGATCGCC CCAATCTAAGAAATCAGTGTCTTCAGCGGTGGTGTGATGGAATGTTTTTT TATGGTGTAGCGCTCGAATCGGATCGAATCGAAGGCGGGAGAGCCAGCCG TGTACTTGAAGTACTAAGTTTGGTATTTTTAGCTCCCCGTTAGGAGGGAA GAATTAATTCGACGTGGTGTTGTACCCATGCATGGAGTTCTTGGGGCGTG TAAGAAAGGAACAGGGAGTTTTGAAATAAGCGTATGCCTAGCTTGCGAAG CTCGTAGTGAGTCTATAATCTACCTGATTCTTCGTCCACGCCCGGAGTAT TCCGTGTACTGTGTCATGTCATGTATGCCAGGTAATGGAAAGCTGTTTTA TATGCATTTGCTAGTAGGTGTGTGCATAAATATTGATGAACTTTGTTTTG CGGGGGTTGATCGACGAAATACGGCAGCAGCAGCTGATCCGTCGCGGGTT TCGACAAAAAAGGGCATCCAAGAATTAAGCATTAGAAAGCTCTTCTATAC CTCTACATTAGACTCTAGAGCTTTGCGAGCAGCATGGAGGCGTGCGCGCG TGTGTGTGCGTGTGTGGCTGCGTACATAGAAAACAAACAAACTTGCTTCG TTTTTTCCTGGCCGTCTCTCTTTTTATGTTGATTGATCGATCGAGAATAA TATGGATTTCGTAAGCTCTTTTCTCTTGTTTCTTCTGTATAGCGACGTGA GTGCATGTGCGTATATCATATCACCTACAAGCACATACTTGTATATATGA TGAATTGTGTTCCAACATCTGGAGTACAGCATTGTTAAAACAAGTGGTTT CTCTTTCGTTCTCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig143:229777..237890+

>mRNA_P-littoralis_Contig143.61.1 ID=mRNA_P-littoralis_Contig143.61.1|Name=mRNA_P-littoralis_Contig143.61.1|organism=Pylaiella littoralis U1_48|type=CDS|length=891bp|location=Sequence derived from alignment at P-littoralis_Contig143:229777..237890+ (Pylaiella littoralis U1_48)
ATGTCGCCTTTGAGGACAGTATGTTTCGCGGTGGGCGTGGTGGCCACAGC
TACTGCGGCGGTCGCGCCCGGAACACCCGTCTACTCCCTTCAGGGCGGCG
GAAGCGGATTGGAGACGGAAGGCGACTACCTGGAGAACAAGATCGCGAGG
GGGGTCTACGGCGCCACCGGAAACGTGTTCGGAGCTTTCGGGGCCGTTGG
TGCCGCCGCCGCGGACGAGGCCAAGCAGGACTACAGGGCCGCCAAGTCCG
CGGCTAGGGCTGCCCGGGAATCGACACGAGACGCCGCCAGATCCGCCCGA
GAATCTGCCCGAGAATCTGTGAAGAACGTCAAGGACGCGGCCATGAGCGC
TCGGGATTCCGTCCACATTCCTAACAAAATCGGGTGGCCTTTCGACGACA
AGACCGTCGAGGATGCCAAGCCCAAGCTCTCGTGGAGCGGCGGGGGGGCC
AAGCAGATGGTCGTCGACGACAGGCACGCGGTGTTCAAGTTCCTCTCCAA
CCCGAACAACGTATTCGTGGCCCAGGGTGTGCTCGCTCTCGTGTTCGGTG
TCGTTCACCTCGCCAAGTACGATGCGTTCGTGAGCAAGTTCGCCGGGCCG
GTGTGCAGGCTCTTCGGCCTAGACTGGGCGGCGGGGGCGGTCGGTCCTCA
CGTCAAGTTGGTGGGCGCTTACTTGGCAGGCGTTCTTGTGTCCGACGTGC
TGGCGTACAAGTCCAACAGCGCCGGCTTCAAGCGCGGAAAGATCTGGCAC
GAGATGGGCTCTTGCATCGCCATCTCGGCCGTGTGCATCACGGACCTCTT
CTCGGCGGAACAGCCGGCCGATGTCGTGCCCCACGCCATTGTTGCCTTCC
TCTTTGCCGCCTGGTACTCCTACCTCTCTAAGCAGTACTAA
back to top