prot_P-littoralis_Contig143.45.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig143.45.2
Unique Name	prot_P-littoralis_Contig143.45.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	100

Homology

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: D8LC11_ECTSI (COX assembly mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC11_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 4.760e-56
Identity = 86/99 (86.87%), Postives = 95/99 (95.96%), Query Frame = 0

Query:    1 MATVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVELHREAQAKESSS 99
            MAT+KDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGM+VVFSCREQNA+MN+CLNQHTN +SF++YKFERE+ELHRE QA +S S
Sbjct:    1 MATLKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIELHRETQAAKSPS 99

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: A0A8K1C5Z8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z8_PYTOL)

HSP 1 Score: 103 bits (257), Expect = 7.870e-27
Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVEL 88
            T K+  R+ RLSWS +AEH+LR+EL +IA+ +C D+  KFA CARE G+MV+F CREQN  MN CL+Q+TN + F  YK +RE E+
Sbjct:    9 TAKERFRSSRLSWSNQAEHKLRQELNDIAIAKCRDTTEKFAVCARESGLMVIFRCREQNKAMNDCLHQYTNDEQFRVYKEKREKEI 94

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: A0A3R7H0R3_9STRA (COX assembly mitochondrial protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H0R3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.820e-24
Identity = 44/86 (51.16%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVEL 88
            T KD  R+ RLSWS +AEH+LR+EL +IA+ +C D  +KFA CA+  G+MV F CR+ N  +NACL+Q+T+A+ F+ Y+ +RE E+
Sbjct:   10 TAKDTFRSSRLSWSNQAEHKLRQELSDIAIAKCRDISSKFAECAKANGLMVAFKCRQHNKDLNACLHQYTSAEQFDIYRQKREKEM 95

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: A0A484E0L3_BRELC (COX assembly mitochondrial protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0L3_BRELC)

HSP 1 Score: 90.9 bits (224), Expect = 8.170e-22
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVEL 88
            T K   R+ RLSWS +AEH+L+++L +IA+ +C     +FA CAR  G M++F CREQN  +NACL+Q+TN + FE ++  RE E+
Sbjct:    9 TAKAAFRSSRLSWSNQAEHKLKQQLSDIAIAKCRSVSEQFADCARANGFMIIFKCREQNKALNACLHQYTNDEQFELFRKRREKEM 94

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: W2NEW3_PHYPR (COX assembly mitochondrial protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NEW3_PHYPR)

HSP 1 Score: 90.9 bits (224), Expect = 9.130e-22
Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVELHREAQA 94
            T K   R+ RLSWS +AEH+L++EL +IA+ +C     KFA CA+  G+MV F CR+ N  +NACL+Q+TN + FE Y+  RE E+  E +A
Sbjct:    9 TAKAKFRSSRLSWSNQAEHKLKQELSDIAIAKCRSVSEKFAECAKANGLMVAFKCRDHNKALNACLHQYTNDEQFEIYRKRREKEMLHEEKA 100

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: A0A5D6XX76_9STRA (COX assembly mitochondrial protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX76_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-21
Identity = 42/86 (48.84%), Postives = 62/86 (72.09%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVEL 88
            T K+  R+ RLSWS +AEH+LR+EL +IA+ +C D  A FAACA+E+G++VVF CR  N  MN CL+Q T+ + F+ Y+ +R  ++
Sbjct:   16 TAKEHFRSSRLSWSNQAEHKLRQELNDIAIAKCRDVTASFAACAQEQGLLVVFKCRALNKAMNDCLHQFTSDEQFQAYRDKRSKDV 101

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: H3GT38_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GT38_PHYRM)

HSP 1 Score: 97.4 bits (241), Expect = 1.720e-21
Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVEL 88
            T K+  R+ RLSWS +AEH+LR+EL +IA+ +C +   KFA CA+  G+MVVF CRE N  +NACL+Q+TNA+ FE Y+  RE E+
Sbjct:  711 TAKNKFRSSRLSWSNQAEHKLRQELSDIAIAKCRNVSEKFAECAKANGLMVVFKCRENNRELNACLHQYTNAEQFEIYRQRREKEM 796

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: K3X183_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X183_GLOUD)

HSP 1 Score: 95.9 bits (237), Expect = 6.020e-21
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVEL 88
            T K+  R+ RLSWS +AEH+LR+EL +IA+ +C     KFA CA+E+G+MVV  CREQN  MNACL+++TN + F+ Y+  R  E+
Sbjct:  817 TAKENFRSSRLSWSNQAEHKLRQELNDIAIAKCRSITEKFAECAKEQGLMVVVRCREQNKAMNACLHEYTNPEQFQLYRERRSKEV 902

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: A0A3M6VM01_9STRA (COX assembly mitochondrial protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VM01_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.350e-20
Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFERE 85
            T K   R+ RLSWS +AEH+L++EL +IA+ +C     KFA CA+  G++VVF C++ N  +NACL+Q+TN + FE Y+ +RE
Sbjct:    9 TAKAQFRSSRLSWSNQAEHKLKQELSDIAIAKCHSVAEKFAECAKANGLLVVFKCQDHNKALNACLHQYTNDEQFEIYRQKRE 91

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BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Match: A0A2P4XLT2_9STRA (Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLT2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.530e-20
Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0

Query:    3 TVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVELHREAQA 94
            T K   R+ RLSWS +AEH+L++EL +IA+ +C     KFA CA+  G+MVVF CR+ N  +NACL+Q+TN + FE Y+ +RE E+  E +A
Sbjct:  770 TAKAKFRSSRLSWSNQAEHKLKQELSDIAISKCHSVAEKFAECAKANGLMVVFKCRDHNKALNACLHQYTNDEQFEIYRQKREKEIPHEEKA 861

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig143.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23


Match Name	E-value	Identity	Description
D8LC11_ECTSI	4.760e-56	86.87	COX assembly mitochondrial protein n=2 Tax=Ectocar...	[more]
A0A8K1C5Z8_PYTOL	7.870e-27	55.81	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3R7H0R3_9STRA	6.820e-24	51.16	COX assembly mitochondrial protein n=3 Tax=Phytoph...	[more]
A0A484E0L3_BRELC	8.170e-22	47.67	COX assembly mitochondrial protein n=1 Tax=Bremia ...	[more]
W2NEW3_PHYPR	9.130e-22	47.83	COX assembly mitochondrial protein n=7 Tax=Phytoph...	[more]
A0A5D6XX76_9STRA	1.020e-21	48.84	COX assembly mitochondrial protein n=1 Tax=Pythium...	[more]
H3GT38_PHYRM	1.720e-21	53.49	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
K3X183_GLOUD	6.020e-21	51.16	Uncharacterized protein n=2 Tax=Globisporangium ul...	[more]
A0A3M6VM01_9STRA	1.350e-20	48.19	COX assembly mitochondrial protein n=4 Tax=Peronos...	[more]
A0A2P4XLT2_9STRA	1.530e-20	48.91	Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Phyt...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PFAM	PF08583	Cmc1	coord: 23..85 e-value: 4.0E-13 score: 49.2
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PANTHER	PTHR22977	COX ASSEMBLY MITOCHONDRIAL PROTEIN	coord: 17..95
None	No IPR available	PANTHER	PTHR22977:SF5	COX ASSEMBLY MITOCHONDRIAL PROTEIN HOMOLOG	coord: 17..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig143	contig	P-littoralis_Contig143:187997..190831 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig143.45.2	mRNA_P-littoralis_Contig143.45.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig143 186932..190852 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig143.45.2 ID=prot_P-littoralis_Contig143.45.2|Name=mRNA_P-littoralis_Contig143.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MATVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKG
MMVVFSCREQNAMMNACLNQHTNADSFEQYKFEREVELHREAQAKESSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013892	Cyt_c_biogenesis_Cmc1-like