prot_P-littoralis_Contig1422.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1422.2.1
Unique Nameprot_P-littoralis_Contig1422.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length45
Homology
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: A0A554VRL6_9FLAO (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Aquimarina algiphila TaxID=2047982 RepID=A0A554VRL6_9FLAO)

HSP 1 Score: 63.2 bits (152), Expect = 2.410e-11
Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLI 38
            MKGLFDAM GIVF DD+RICKV S KIYG VPRT V I
Sbjct:  107 MKGLFDAMGGIVFTDDARICKVSSTKIYGLVPRTEVTI 144          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: UPI001BB87245 (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI001BB87245)

HSP 1 Score: 53.5 bits (127), Expect = 1.250e-7
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREI 41
            MKGL DAM+GIVFIDD++I +VK+ KIYG +PR  +   E+
Sbjct:  105 MKGLCDAMSGIVFIDDAKIAEVKTRKIYGFIPRIEIEFYEL 145          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: UPI0019C73BBE (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI0019C73BBE)

HSP 1 Score: 52.0 bits (123), Expect = 4.850e-7
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNV 36
            +K +FD +NGIVFIDDSR+ +V SEKIYG  PR  +
Sbjct:  104 LKAIFDGLNGIVFIDDSRVSRVLSEKIYGNEPRVEL 139          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: A0A7C7GFW0_9FLAO (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7GFW0_9FLAO)

HSP 1 Score: 50.8 bits (120), Expect = 1.350e-6
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    2 KGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRT 34
            KG+ DAM GIVFI+DS+IC ++SEK+YG  P+T
Sbjct:  102 KGVCDAMEGIVFINDSQICSLRSEKVYGLTPKT 134          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: UPI00101D94AD (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Anaerophilus nitritogenes TaxID=2498136 RepID=UPI00101D94AD)

HSP 1 Score: 50.1 bits (118), Expect = 2.270e-6
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREIE 42
            MK + DA+NGI + DDS+I K   EK Y +VPR  V+I+E+E
Sbjct:   92 MKSITDALNGIAYKDDSQIIKATVEKYYSEVPRAEVVIKELE 133          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: S0A5U6_9CAUD (Holliday junction resolvase, RusA n=3 Tax=crAss-like viruses TaxID=1978007 RepID=S0A5U6_9CAUD)

HSP 1 Score: 50.1 bits (118), Expect = 2.890e-6
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    2 KGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREI 41
            K L DAM  +VF +DSRIC+++ +KIYG  PRT V ++EI
Sbjct:  105 KNLLDAMEKLVFANDSRICRIRIQKIYGFEPRTEVNLKEI 144          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: UPI001F3C54DE (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Chryseobacterium sp. R2A-55 TaxID=2744445 RepID=UPI001F3C54DE)

HSP 1 Score: 49.7 bits (117), Expect = 3.880e-6
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    2 KGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREI 41
            KG+ D++ GIVF +DS+IC+V S KIYG VPR  ++  E+
Sbjct:  107 KGVADSLEGIVFNNDSQICEVASRKIYGTVPRVELIFEEL 146          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: A0A1N7LFP1_9FLAO (Holliday junction resolvase RusA (Prophage-encoded endonuclease) n=1 Tax=Chryseobacterium gambrini TaxID=373672 RepID=A0A1N7LFP1_9FLAO)

HSP 1 Score: 48.1 bits (113), Expect = 1.580e-5
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    2 KGLFDAMNGIVFIDDSRICKVKS-EKIYGQVPRTNV 36
            K LFDA+ GIVF++DS+ICK+ + EKIYG VPR  +
Sbjct:  108 KPLFDALQGIVFLNDSQICKISNVEKIYGLVPRIEI 143          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: UPI000AD7C1BA (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Metabacillus fastidiosus TaxID=1458 RepID=UPI000AD7C1BA)

HSP 1 Score: 45.4 bits (106), Expect = 3.040e-5
Identity = 18/42 (42.86%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREIE 42
            +KG+FDA+N +V+ DD+++ KV + K YG+VP   ++I E++
Sbjct:   16 VKGVFDALNKLVWQDDNQVAKVTAVKSYGEVPGMEIVINELK 57          
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Match: UPI000789417D (RusA family crossover junction endodeoxyribonuclease n=1 Tax=Chryseobacterium indologenes TaxID=253 RepID=UPI000789417D)

HSP 1 Score: 47.0 bits (110), Expect = 4.250e-5
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    1 MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREI 41
            MK   DAMNGIVF DDS I KV+SEKIYG  P   +  +E+
Sbjct:  107 MKLTMDAMNGIVFKDDSLIVKVESEKIYGLTPCVELEFQEL 147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1422.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A554VRL6_9FLAO2.410e-1178.95RusA family crossover junction endodeoxyribonuclea... [more]
UPI001BB872451.250e-758.54RusA family crossover junction endodeoxyribonuclea... [more]
UPI0019C73BBE4.850e-761.11RusA family crossover junction endodeoxyribonuclea... [more]
A0A7C7GFW0_9FLAO1.350e-663.64RusA family crossover junction endodeoxyribonuclea... [more]
UPI00101D94AD2.270e-652.38RusA family crossover junction endodeoxyribonuclea... [more]
S0A5U6_9CAUD2.890e-655.00Holliday junction resolvase, RusA n=3 Tax=crAss-li... [more]
UPI001F3C54DE3.880e-652.50RusA family crossover junction endodeoxyribonuclea... [more]
A0A1N7LFP1_9FLAO1.580e-561.11Holliday junction resolvase RusA (Prophage-encoded... [more]
UPI000AD7C1BA3.040e-542.86RusA family crossover junction endodeoxyribonuclea... [more]
UPI000789417D4.250e-558.54RusA family crossover junction endodeoxyribonuclea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008822Holliday junction resolvase RusA-likePFAMPF05866RusAcoord: 1..39
e-value: 2.5E-9
score: 37.7
IPR036614Holliday junction resolvase RusA-like superfamilyGENE3D3.30.1330.70Holliday junction resolvase RusAcoord: 1..44
e-value: 1.4E-6
score: 30.5
IPR036614Holliday junction resolvase RusA-like superfamilySUPERFAMILY103084Holliday junction resolvase RusAcoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1422contigP-littoralis_Contig1422:2152..2286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1422.2.1mRNA_P-littoralis_Contig1422.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1422 2152..2594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1422.2.1 ID=prot_P-littoralis_Contig1422.2.1|Name=mRNA_P-littoralis_Contig1422.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=45bp
MKGLFDAMNGIVFIDDSRICKVKSEKIYGQVPRTNVLIREIENV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008822Endonuclease_RusA-like
IPR036614RusA-like_sf