prot_P-littoralis_Contig142.101.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig142.101.1
Unique Name	prot_P-littoralis_Contig142.101.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	281

Homology

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BLAST of mRNA_P-littoralis_Contig142.101.1 vs. uniprot
Match: A0A6H5JX01_9PHAE (DUF155 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX01_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.010e-37
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0

Query:  161 GDYRSEGEQPSTERNGNRRRR-PIGEAPRQDSFRTNRMPKRGGRKRLRRNLARAAAVRRRRVKMRVSSYCVARGLKTLELLRWLESQPNRQLSQKYLA 257
            GDYRSEGEQPSTERNG+RRR+ P+GEA RQDSFRTNRMPKRGGRKRLRRNL R AA RRRR+K+RVSSYCVARGL+TLELL+WLESQPNRQLS  YLA
Sbjct:   89 GDYRSEGEQPSTERNGSRRRQHPLGEAARQDSFRTNRMPKRGGRKRLRRNLDRPAAARRRRIKIRVSSYCVARGLETLELLKWLESQPNRQLSIGYLA 186

[Close]

BLAST of mRNA_P-littoralis_Contig142.101.1 vs. uniprot
Match: D8LTX9_ECTSI (DUF155 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX9_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.160e-19
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 0

Query:  197 MPKRGGRKRLRRNLARAAAVRRRRVKMRVSSYCVARGLKTLELLRWLESQPNRQLSQKYLA 257
            MPKRGGRKRLRRNL R AA RRRR+K+RVSSYCVARGL+TLELL+WLESQPNRQLS  YLA
Sbjct:    1 MPKRGGRKRLRRNLDRPAAARRRRIKIRVSSYCVARGLETLELLKWLESQPNRQLSIGYLA 61

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig142.101.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig142.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JX01_9PHAE	1.010e-37	85.71	DUF155 domain-containing protein n=1 Tax=Ectocarpu...	[more]
D8LTX9_ECTSI	1.160e-19	85.25	DUF155 domain-containing protein n=1 Tax=Ectocarpu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig142	contig	P-littoralis_Contig142:314861..321070 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig142.101.1	mRNA_P-littoralis_Contig142.101.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig142 314861..321070 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig142.101.1 ID=prot_P-littoralis_Contig142.101.1|Name=mRNA_P-littoralis_Contig142.101.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=281bp
MCRACVGQHCAGGITTAVHETRKYCEVAMINDGSRELRHQLSTPLLPEAD
KEEYDADSAMHSPRDTHRAGCARGEWSGDGSGDNSSTSGRGRDKSGGRQN
QYQQKPPRTNRGGGSGGGSVAQRLQGARLPSSPRRANARFSPSRQQDAVT
QAALSHGQGGGDYRSEGEQPSTERNGNRRRRPIGEAPRQDSFRTNRMPKR
GGRKRLRRNLARAAAVRRRRVKMRVSSYCVARGLKTLELLRWLESQPNRQ
LSQKYLASEGGAAAAGGTKTTTAAAAAAEAA