mRNA_P-littoralis_Contig140.24.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: D8LEQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ5_ECTSI) HSP 1 Score: 734 bits (1896), Expect = 5.930e-253 Identity = 456/718 (63.51%), Postives = 515/718 (71.73%), Query Frame = 2
Query: 107 MGKINKRQRKFLSKKVLPHRKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEQKRKTLPEGLDTAAFLECPWLSREACAAAGRDVCVAPFEPDSDLLEDGTQAAPSSRKHGERRGSSTXXXSNLLAEKTARAMIERAADEESIDDLLCVVSALQTAAAVA-----------------------ASTATRTEALSRLHLAFRAHLGPKREE--GTSGEEWEDAVRAHRQQLERAEAWPKLGGPLLSFLTTALDHMEKVEVGTTISDAADAGSTAVGSGKSSSXXXXXXXXXXXXXXXXXXLVGGLTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLAREALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLELLHAREGRPCPTATTAGSPGGGDSSQDGHDGAVASKGTGKKRGXXXXXXXXXXXXXAAVNLSAVAGLGKEDLKLGEVHAAVSREAASLIAREAVCYRWSAGLPELCAGTGARLGLMLDGSCL--TADGGAGKCRARVRALQVSLGKTAAETISRRARGSKHPGEAGPLDTFRSM 2179
MGK+NKRQRKFLSKKVL HRKKG G Q RKTLP+G+DTAAFLECPWLSREACAAAGRD CVAPFEP+ LLE ++ K G+R G S S+ L E+ ARAM+ RA DE S+DDLL VV ALQ A A A+ A +EA SRLHLAFRAHLGP+R+E G+S EEWEDAVRAHRQ+LE+AEAWP+LGG LLSFLT+ALD +E E T+ S A + + + G S + LV GL M++HVPLLFPFPRL+RRYLAFLL VL+T+D+TA +SLAFVRLYELSTSQPMPFLHDAFKGSYRCYRA AER+G GG+GA GV A GAG+ SLPLLRE +ELFGVEKPSAYLHAYVYIHDLAREA+ AAAEV KGGG R+AG ALRRLRSW FLQSL LWTSVV AHPAKSSLGPL+ P+AK LEITFQLSPGLYGAPRTLALAR+AQDLAAA+GVFLPTSHHLVGLLELLHARE RP TA++A XXXXXXXXXXXXX A++LSA+AGLGKEDL++ EV AAVSREAA L+AREAVCYRWSAG+PELCA T ARLG +LDG ADG AG+ RARV+ALQ SLGK+AAET++RRARGSKHPGEAGP+DTFR M
Sbjct: 1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGNGAAAGAATALEASQAP-GAQHRKTLPDGVDTAAFLECPWLSREACAAAGRDACVAPFEPEVALLE-----GAATSKRGKRGGGSKGSGSSSLTEEAARAMVGRAVDERSLDDLLRVVWALQEATTAAGDPSSPALPTTCHQALRAAPGSKAAGALVSEASSRLHLAFRAHLGPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDSVE-TEWATSNSVAVEGRADSSKQGSSGATSAS--------------LVDGLDRMRNHVPLLFPFPRLARRYLAFLLDVLQTSDNTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIG-GGRGA------GVMAKGDGAGS-SLPLLREWFAELFGVEKPSAYLHAYVYIHDLAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQLWTSVVTAHPAKSSLGPLVPPLAKALEITFQLSPGLYGAPRTLALARSAQDLAAAAGVFLPTSHHLVGLLELLHAREARPGSTASSAXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDLSAMAGLGKEDLRVVEVRAAVSREAAGLVAREAVCYRWSAGMPELCASTRARLGRLLDGGDGGGXADGAAGRWRARVKALQTSLGKSAAETMARRARGSKHPGEAGPVDTFRGM 683
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A6H5KR85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR85_9PHAE) HSP 1 Score: 676 bits (1744), Expect = 1.760e-229 Identity = 427/661 (64.60%), Postives = 482/661 (72.92%), Query Frame = 2
Query: 107 MGKINKRQRKFLSKKVLPHRKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEQKRKTLPEGLDTAAFLECPWLSREACAAAGRDVCVAPFEPDSDLLEDGTQAAPSSRKHGERRGSSTXXXSNLLAEKTARAMIERAADEESIDDLLCVVSALQ-----TAAAVA--------------ASTATRTEALSRLHLAFRAHLGPKREE--GTSGEEWEDAVRAHRQQLERAEAWPKLGGPLLSFLTTALDHMEKVEVGTTISDAAD--AGSTAVGSGKSSSXXXXXXXXXXXXXXXXXXLVGGLTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLAREALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLELLHAREGRPCPTATTAGSPGGGDSSQDGHDGAVASKGTGKKRGXXXXXXXXXXXXXAAVNLSAVAGLGKEDLKLGEVHAAVSREAASLIAREAVCYRWSAGLPELCAGTGARLGLMLDG 2020
MGK+NKRQRKFLSKKVL HRKKG G Q RKTLP+G+DTAAFLECPWLS EACA AGRD CVAPFEP++ LLE A+PS K G++ G S+ L E+ ARAMI RA DE S+DDLL VV ALQ ++AAV A+ A +EA SRLHLAFRAHL P R+E G+S EEWED VRAHRQ+LE+AEAWP+LGG LLSFLT+ALD +E E T+IS A + A S+ GS ++S L GL M++HVPLLFPFPRL+RRYL+FLL VL+T+D TA +SLAFVRLYELSTSQPMPFLHDAFKGSYRCYRA AER+G GG+GA V A GAG+ SLPLLRECL+ELFGVEKPSAYLHAYVYIH+LAREA+ AAAEV KGGG REAG ALRRLRSW FLQSL LWTSVV AHPAKSSLGPL+ P+AK LEITFQLSPGLYGAPRTLALAR+AQDLAAA+GVFLPTSH+LVGLLELLHARE RP TA +AG P D + G G + G XXXXXXXXXXXXXAA++LSA+AGLGKEDL++ EV AAVSREAA LIAREAVCYRWSAG+PELCA TGARLG +LDG
Sbjct: 1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKGVGGAAATAPEASQAP-GAQHRKTLPDGVDTAAFLECPWLSPEACANAGRDACVAPFEPEAALLEG---ASPS--KSGKQGGGGEGSVSSSLTEQAARAMIGRAVDERSLDDLLRVVWALQAIGDPSSAAVPTTSHQPLRAAPGSKAADALISEASSRLHLAFRAHLEPDRDEEDGSSVEEWEDTVRAHRQKLEKAEAWPRLGGALLSFLTSALDCVE-TEWATSISVAVEGCADSSKQGSSAATSAS----------------LEDGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDSTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIG-GGRGAR------VMARGEGAGS-SLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVGAAAEVKKGGGMAREAGPALRRLRSWGFLQSLQLWTSVVTAHPAKSSLGPLVPPLAKALEITFQLSPGLYGAPRTLALARSAQDLAAAAGVFLPTSHYLVGLLELLHAREARPGATAPSAGGPA--DGEEAGPGGLTVASGX----XXXXXXXXXXXXXXAALDLSAMAGLGKEDLRVAEVRAAVSREAAGLIAREAVCYRWSAGMPELCASTGARLGRLLDG 624
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A835ZBW6_9STRA (Noc2p family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 5.680e-17 Identity = 156/551 (28.31%), Postives = 211/551 (38.29%), Query Frame = 2
Query: 635 AFRAHLGPKRE-----EGTSGEEWEDAVRA--------HRQQLERAEAWPKLGGPLLSFLTTALDHMEKVEVGTTISDAADAGSTAVGSGKSSSXXXXXXXXXXXXXXXXXXLVGGLTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGA------GSLPLLRECLSELFGVEKPSAYLHAYVYIHDLAREALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSS----------LGPLIAPVAKTLEITFQLS-------PGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLELLHAREGRPCPTATTAGSPGGGDSSQDGHDGAVASKGTGKKRGXXXXXXXXXXXXXAAVNLSAVAGLGKEDLKLGEVHAAVSREAASLIAREAVCYRWSAGLPELCAGTGARL--GLMLDGSCLTADGGAGKCRARVRALQVSLGKTAAETISRRARGSKHPGEAGPLDTFR 2173
AF A L P+ + +G GE VRA ++ R+EAWP+L G L +FL A H + AA A + V L+ PFP L+R L + SQP+P H A + +YR YR ER+ GSSG ++ LR ++EL+ E ++ LHA+V++H +AA E + GG EA + +RSW FLQ +LLWT VVAA + AP+ PG P LALARAAQDLAAA+GVFLP + +G LE+ D A + XXXXXXXXXXXXX A L+AVA L +++L+ A+ EAA+L+AREA Y S P+ AG AR A +RA ++ + A + R+R S HP L+ R
Sbjct: 218 AFAAQLLPQADAAAAADGGDGEAAAAGVRAASRSAFLQRHAKMPRSEAWPRLAGALRAFLEAA-PHA--------LLSAAGAATAEV-------------------------XXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLD----------------GSSGXXXXXXXXXATMAALRTGVAELYRHEPAASQLHAFVFLHT-----MAATVEAAEEGGKAGEAATV--EVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEV----------------------------DSLYAVRSAAXXXXXXXXXXXXXXXXXFA--LAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPDY-AGRCARALTAAAAXXXXXXXXXXXADVAAAMRAAAEAIERRARDVERARSRLSTHPANVTALEALR 680
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A1V9Z026_9STRA (Nucleolar complex protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z026_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.530e-13 Identity = 65/241 (26.97%), Postives = 110/241 (45.64%), Query Frame = 2
Query: 944 LTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLAREALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL 1666
L + ++ + P + +R+ L + + + DT LAFVR+ EL+T P PFL K Y Y A+ ++G ++ C+ EL+G++ S+Y H ++YI LA + K +P + L+ L +W F+ L +W +VVAA+P +S L L+ P+++ +L+ L P + Q LA A+ F+PTS L+ +L L
Sbjct: 268 LRGLSTYMRFVVPCHKTARKMLKCYVSLWGKSLDTQVCLLAFVRVRELATLMPFPFLELCLKALYLSYMRNAKF-------------------TNGVNFQHHIVMGNCVVELYGLDLVSSYQHVFIYIRQLA-------IAIRKAIASP--SADTLKGLLTWRFVNCLKVWAAVVAAYPEESQLKALVYPISQLCFALMRLASVLRYVPLRFQCVKILQQLAFATNTFIPTSPVLLDILAL 480
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A7J6EEJ2_CANSA (Uncharacterized protein (Fragment) n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EEJ2_CANSA) HSP 1 Score: 80.5 bits (197), Expect = 1.090e-11 Identity = 69/244 (28.28%), Postives = 107/244 (43.85%), Query Frame = 2
Query: 944 LTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLA---REALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL 1666
L +++ L FP L R+Y+ L T V ++F+ L +L L + FKG Y+ Y + V A A + L+ C+ ELFGV+ P+AY HA+++I LA REAL N R A R++ W F+ L LWT + + +S L PL P+++ + +L P P L R +A+A+ F+P S L+ +LE+
Sbjct: 278 LRRLKYSSVFLAAFPSLLRKYIKIALHFWGTGGGALPV-VSFLFLRDLCIRLGSDCLDECFKGIYKAYVLNCQFVNA-------------------AKLQHIQFLQNCIIELFGVDLPTAYQHAFIFIRQLAMVLREAL-----------NTRTK-EAFRKVYEWKFMSCLELWTGCICTYGKESDLKPLAYPLSQIIAGVARLVPTARYFPLRLRCVRMLNQIASATDTFIPVSMLLLDMLEM 489
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A7J6HEM0_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6HEM0_CANSA) HSP 1 Score: 80.5 bits (197), Expect = 1.130e-11 Identity = 69/244 (28.28%), Postives = 107/244 (43.85%), Query Frame = 2
Query: 944 LTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLA---REALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL 1666
L +++ L FP L R+Y+ L T V ++F+ L +L L + FKG Y+ Y + V A A + L+ C+ ELFGV+ P+AY HA+++I LA REAL N R A R++ W F+ L LWT + + +S L PL P+++ + +L P P L R +A+A+ F+P S L+ +LE+
Sbjct: 324 LRRLKYSSVFLAAFPSLLRKYIKIALHFWGTGGGALPV-VSFLFLRDLCIRLGSDCLDECFKGIYKAYVLNCQFVNA-------------------AKLQHIQFLQNCIIELFGVDLPTAYQHAFIFIRQLAMVLREAL-----------NTRTK-EAFRKVYEWKFMSCLELWTGCICTYGKESDLKPLAYPLSQIIAGVARLVPTARYFPLRLRCVRMLNQIASATDTFIPVSMLLLDMLEM 535
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A1V9ZBH9_9STRA (Nucleolar complex protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBH9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.740e-11 Identity = 61/241 (25.31%), Postives = 111/241 (46.06%), Query Frame = 2
Query: 944 LTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLAREALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL 1666
L + ++ + P + +R+ L +++ + DT LAFVR+ +LST P PFL K Y Y A+ ++G ++ C+ EL+G++ S+Y H ++YI LA + K +P + L+ L +W F+ L +W +VV+A+P ++ L L+ P+++ +L+ + P + Q LA A+ F+PT+ L+ +L L
Sbjct: 258 LRGLNKYMRFVVPCHKTARKLLKCFVQLWGKSLDTQVCMLAFVRVRDLSTLMPFPFLELCLKAIYLSYMRNAKF-------------------TNGVNFQHHIVMGNCVVELYGLDLVSSYQHVFIYIRQLA-------IAIRKAIASP--STETLKGLLTWRFVNCLKVWAAVVSAYPEENQLKALVYPISQLCFALMRLASVVRYIPLRFQCIKILQQLAFATNTFIPTAPVLLDVLNL 470
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A5P1E5B6_ASPOF (Uncharacterized protein n=6 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E5B6_ASPOF) HSP 1 Score: 79.7 bits (195), Expect = 1.870e-11 Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 2
Query: 1256 LRECLSELFGVEKPSAYLHAYVYIHDLA---REALAAAAE--VHKGGGNPREAGS---------ALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL--LHAR 1678
L C++EL+GV+ PSAY HA+V+I LA R AL + V + + GS A +++ W F+ L LWT V+ A+ +++ GPL P+A+ + L P P L + LA A+G ++P S HL+ +LE+ LH R
Sbjct: 323 LGNCVTELYGVDVPSAYQHAFVFIRQLAVILRGALTVRGDKVVKEKKDKKQRDGSKSSRKQLDKAYQKVYDWQFISCLELWTGVICAYNSEAEFGPLAYPLAQIISGVASLVPTARYIPLRLRCMKMLNRLAGATGTYIPVSSHLLDMLEMKELHKR 479
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A834FZ06_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FZ06_RHOSS) HSP 1 Score: 79.0 bits (193), Expect = 3.260e-11 Identity = 62/231 (26.84%), Postives = 104/231 (45.02%), Query Frame = 2
Query: 983 FPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLA---REALAAAAEVHKGGGNPREAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL 1666
FP L RRY+ ++ T V ++F+ + ++ L + F+G Y+ Y + V A + + L C++ELFGV+ P+AY HA+V+I LA R+AL + A R++ W ++ L LWT + A+ +++ PL P+ + + +L P P L AR +AA+SG F+P S L+ +LE+
Sbjct: 282 FPSLLRRYIKVVIHFWGTGGGALPV-VSFLFIRDICIRLGSDCLDECFRGIYKAYVLSCQFVNA-------------------SKLQHIHFLGNCVTELFGVDLPAAYQHAFVFIRQLATILRDALT------------MKTKEAFRKVYEWKYMNCLELWTGAICAYSSEADFQPLAYPLTQIISGVARLVPTARYFPLRLRCARMLNRIAASSGTFIPVSLLLLDMLEM 480
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Match: A0A834ZC74_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZC74_9MAGN) HSP 1 Score: 78.6 bits (192), Expect = 4.840e-11 Identity = 67/253 (26.48%), Postives = 110/253 (43.48%), Query Frame = 2
Query: 944 LTSMQHHVPLLFPFPRLSRRYLAFLLRVLETTDDTATVSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAVAERVGAGGKGAAAVGKVGVKAGSSGAGAGSLPLLRECLSELFGVEKPSAYLHAYVYIHDLA---REALAAAAEVHKGGGNP---------REAGSALRRLRSWDFLQSLLLWTSVVAAHPAKSSLGPLIAPVAKTLEITFQLSPGLYGAPRTLALARAAQDLAAASGVFLPTSHHLVGLLEL 1666
L +++ L FP L R+Y+ L T V ++F+ + +L L + FKG Y+ Y + V A + L C+ EL+GV+ P+AY HA+++I LA REAL +V G + R A R++ W F+ L LWT + A+ +++ PL P+ + + +L P P L AR +AA++G F+P S L+ +L++
Sbjct: 415 LRRLRYSAIFLAAFPSLLRKYIKVTLHFWGTGGGALPV-VSFLFIRDLCIRLGSDCLDECFKGIYKAYVLSCQFVNA-------------------TKLQHIQFLGNCVIELYGVDLPTAYQHAFIFIRQLAMILREALNMKTKVSDGHNSTHSLLCLIPDRAFQEAFRKVYEWKFMNCLELWTGAICAYGSEADFRPLAYPLIQIISGVARLVPTARYFPLRLRCARMLNRIAASTGSFIPVSLLLLDMLDM 647 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig140.24.2 >prot_P-littoralis_Contig140.24.2 ID=prot_P-littoralis_Contig140.24.2|Name=mRNA_P-littoralis_Contig140.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=723bp MGKINKRQRKFLSKKVLPHRKKGGVRRDDNKKSKGNNSKGGQEDASAGAAback to top mRNA from alignment at P-littoralis_Contig140:87932..92215+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig140.24.2 ID=mRNA_P-littoralis_Contig140.24.2|Name=mRNA_P-littoralis_Contig140.24.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4284bp|location=Sequence derived from alignment at P-littoralis_Contig140:87932..92215+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig140:87932..92215+ >mRNA_P-littoralis_Contig140.24.2 ID=mRNA_P-littoralis_Contig140.24.2|Name=mRNA_P-littoralis_Contig140.24.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2169bp|location=Sequence derived from alignment at P-littoralis_Contig140:87932..92215+ (Pylaiella littoralis U1_48)back to top |