mRNA_P-littoralis_Contig14.94.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 315 bits (807), Expect = 4.270e-94 Identity = 197/335 (58.81%), Postives = 223/335 (66.57%), Query Frame = 1
Query: 43 TRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQQ 1044
T SIKI FQG SRDV V TLA LQAAIA AF+A+LP RS EA KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFL+LNP RLV QGLAP+VLLA MK E A + A + PLGD +EDLAESVAAG+E M VEDD KKEWNDGFVSVEPA +++P A + K+ + +HKAF+AGGI+L PREV PLLVAL V P RL KLG VN + LRAM A K+V +K++
Sbjct: 3 TSSIKINFQGTSRDVNVPVP-VTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDD-KKEWNDGFVSVEPADTSSPGNDNEEKNDAV-----------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKRR 292
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 305 bits (780), Expect = 5.400e-91 Identity = 195/345 (56.52%), Postives = 224/345 (64.93%), Query Frame = 1
Query: 10 NNNNMNTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKPANKH-DREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
NN + N +T T SIKI FQGASRDV V A TLA LQA IA+AF+A+LP RS EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCP SLEISAAGKEK A + D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP+ LL MK E A + A + PLGD +EDLAESVAAG+E M +EDD KKEWNDGFVSVEPA +++P A + K+ + +HKAF+AGGI+L PREV PLLVAL V P RL KLG V+ + LRAM A K+ +K+
Sbjct: 8 NNRDNNDNTMTTSSIKINFQGASRDVNVPAP-VTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSLEDD-KKEWNDGFVSVEPADTSSPDNDNEEKNDAV-----------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKR 307
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.820e-89 Identity = 191/337 (56.68%), Postives = 216/337 (64.09%), Query Frame = 1
Query: 34 TTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKPANKH-DREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
T T SIKITFQGASRDV V LA LQAAIA+AF+ +LP RS EA D+DL FTYKDPDGD IVFDK+SEL LALRLCP SLEISAAGKE A + D E +LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP+VLLA MK E A + A + PLGD +EDLAESVAAG+E M VED KKEWNDGFVSVEPA+ + PA A + K+ + +HKAF+AGGI+L PREV PLLVAL V P RL KLG V + LRAM A K+ +K+
Sbjct: 18 TMTTSSIKITFQGASRDVNVRVP-VMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDG-KKEWNDGFVSVEPAEISFPANDNEEKNDA------------------------------------APEAKKNL---IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKR 308
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 299 bits (766), Expect = 6.500e-89 Identity = 195/345 (56.52%), Postives = 221/345 (64.06%), Query Frame = 1
Query: 10 NNNNMNTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKPANKH-DREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
NN N T T SIKI FQGASRDV V A ATLA LQAAIA+ FE +LP RS EA KD+DL FTYKDPDGD IVFDKDSEL+LALRLCP SLEISAAGKE A K D E LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP++LLA MK E A + A + LGD +EDLAE VAAG+E M VEDD KKEWNDGFVSVEPA++++ A + K+ + +HKAF+AGGI+L PREV PLLVAL V P RL KLG V+ + LRAM A K+ +K+
Sbjct: 19 NNRYNNDKTMTTSSIKINFQGASRDVSVPAP-ATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANN-----AKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDD-KKEWNDGFVSVEPAETSS-----------------------------------SDNGNEEENDDAAPEVKQNL---IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKR 318
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 297 bits (761), Expect = 2.770e-87 Identity = 197/347 (56.77%), Postives = 221/347 (63.69%), Query Frame = 1
Query: 10 NNNNM--NTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
NNNN N T T SIKI FQGASRDV V A +LA LQAAIA+AF+A+LP RS EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISA KE +PA K D E RLYK+AARNLREYNGVPSMT KL KTLAFLKLNP RLV QGLAP+VLLA MK E A + A + PLGD +EDLAESVAAG+E M VEDD KKEWNDGFVS E SAA A + K+ + +HKAF+ GGI+L PREV PLLVAL V P RL KLG V+ + LRAM A K+ +K+
Sbjct: 8 NNNNRYNNDKTMTTPSIKINFQGASRDVNVPAP-VSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDD-KKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDA-------------------------APETKKDL---IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKR 319
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 285 bits (729), Expect = 2.210e-82 Identity = 188/334 (56.29%), Postives = 215/334 (64.37%), Query Frame = 1
Query: 43 TRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
T SIKI FQG SR+V V A TLA LQA IA+AF+A+LP RS EA KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE KP NK D E RLYK+AARNLREYNGVPSMT KL KTLAFLKLNP RLV QGLAP+ LLA MK E A +N + T LGD + +EDLAESVAAG+E M VEDD KKE N+GFVS +P SAA A + K+ + +H AF+AGGI+L PREV PLLVAL V P RL KLG VN ++LRAM A + +K+
Sbjct: 3 TSSIKINFQGTSRNVNVQAPF-TLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAE-AANNMKVSKVT----LGDGENNEDLAESVAAGMELMSVEDD-KKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDA-------------------------APEVKKNL---IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKR 301
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 267 bits (683), Expect = 1.310e-78 Identity = 178/310 (57.42%), Postives = 197/310 (63.55%), Query Frame = 1
Query: 1 NTINNNNM--NTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPRE 921
NTI +NN N T SIKI FQGASRDV V A TL LQAAIA+AF+A+LP RS EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISAA KE KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP+VLLA MK E A + A + PLGD +EDLA+SVAAG+E M VED KKEWNDGFVS E AA A A + K+ + +HKAF+AGGI+L PRE
Sbjct: 2 NTIKHNNCDNNDKMMTTSSIKINFQGASRDVNVPAP-VTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLADSVAAGMELMSVED--KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDA-------------------------APEVKKNL---IHKAFIAGGIQLRPRE 275
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 7.450e-8 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 355 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVL 495
LYK AARNLREY+GVPSMT L KT+ L+L P RLV QGLAP+ +
Sbjct: 53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.090e-7 Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 355 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLA--DMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAG 615
++K AARNLREY+GVPS+TP L T+ L+L P+RLV QGLAP++LL G +A S + + + ++ S DL+ + + G
Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDG 129
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 3.660e-7 Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 355 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLL 498
LYK AARNLREY+GVPS+T L KT+ L+L P RLV QGLAP+ L
Sbjct: 57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFL 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.94.10 >prot_P-littoralis_Contig14.94.10 ID=prot_P-littoralis_Contig14.94.10|Name=mRNA_P-littoralis_Contig14.94.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=516bp MNTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSback to top mRNA from alignment at P-littoralis_Contig14:443985..448086+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.94.10 ID=mRNA_P-littoralis_Contig14.94.10|Name=mRNA_P-littoralis_Contig14.94.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=4102bp|location=Sequence derived from alignment at P-littoralis_Contig14:443985..448086+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:443985..448086+ >mRNA_P-littoralis_Contig14.94.10 ID=mRNA_P-littoralis_Contig14.94.10|Name=mRNA_P-littoralis_Contig14.94.10|organism=Pylaiella littoralis U1_48|type=CDS|length=1548bp|location=Sequence derived from alignment at P-littoralis_Contig14:443985..448086+ (Pylaiella littoralis U1_48)back to top |