mRNA_P-littoralis_Contig14.94.10 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig14.94.10
Unique NamemRNA_P-littoralis_Contig14.94.10
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 4.270e-94
Identity = 197/335 (58.81%), Postives = 223/335 (66.57%), Query Frame = 1
Query:   43 TRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQQ 1044
            T SIKI FQG SRDV V     TLA LQAAIA AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFL+LNP RLV QGLAP+VLLA MK E A +     A   + PLGD   +EDLAESVAAG+E M VEDD KKEWNDGFVSVEPA +++P                                              A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG VN + LRAM  A K+V +K++
Sbjct:    3 TSSIKINFQGTSRDVNVPVP-VTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDD-KKEWNDGFVSVEPADTSSPGNDNEEKNDAV-----------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKRR 292          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 5.400e-91
Identity = 195/345 (56.52%), Postives = 224/345 (64.93%), Query Frame = 1
Query:   10 NNNNMNTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKPANKH-DREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
            NN + N +T  T SIKI FQGASRDV V A   TLA LQA IA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCP SLEISAAGKEK A +  D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP+ LL  MK E A +     A   + PLGD   +EDLAESVAAG+E M +EDD KKEWNDGFVSVEPA +++P                                              A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG V+ + LRAM  A K+  +K+
Sbjct:    8 NNRDNNDNTMTTSSIKINFQGASRDVNVPAP-VTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSLEDD-KKEWNDGFVSVEPADTSSPDNDNEEKNDAV-----------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKR 307          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.820e-89
Identity = 191/337 (56.68%), Postives = 216/337 (64.09%), Query Frame = 1
Query:   34 TTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKPANKH-DREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
            T  T SIKITFQGASRDV V      LA LQAAIA+AF+ +LP RS   EA  D+DL FTYKDPDGD IVFDK+SEL LALRLCP SLEISAAGKE  A +  D E +LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP+VLLA MK E A +     A   + PLGD   +EDLAESVAAG+E M VED  KKEWNDGFVSVEPA+ + PA                                             A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG V  + LRAM  A K+  +K+
Sbjct:   18 TMTTSSIKITFQGASRDVNVRVP-VMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDG-KKEWNDGFVSVEPAEISFPANDNEEKNDA------------------------------------APEAKKNL---IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKR 308          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 6.500e-89
Identity = 195/345 (56.52%), Postives = 221/345 (64.06%), Query Frame = 1
Query:   10 NNNNMNTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKPANKH-DREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
            NN   N  T  T SIKI FQGASRDV V A  ATLA LQAAIA+ FE +LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL+LALRLCP SLEISAAGKE  A K  D E  LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP++LLA MK E A +     A   +  LGD   +EDLAE VAAG+E M VEDD KKEWNDGFVSVEPA++++                                               A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG V+ + LRAM  A K+  +K+
Sbjct:   19 NNRYNNDKTMTTSSIKINFQGASRDVSVPAP-ATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANN-----AKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDD-KKEWNDGFVSVEPAETSS-----------------------------------SDNGNEEENDDAAPEVKQNL---IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKR 318          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 2.770e-87
Identity = 197/347 (56.77%), Postives = 221/347 (63.69%), Query Frame = 1
Query:   10 NNNNM--NTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
            NNNN   N  T  T SIKI FQGASRDV V A   +LA LQAAIA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISA  KE +PA K D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNP RLV QGLAP+VLLA MK E A +     A   + PLGD   +EDLAESVAAG+E M VEDD KKEWNDGFVS E   SAA                                               A + K+ +   +HKAF+ GGI+L PREV PLLVAL V P RL KLG V+ + LRAM  A K+  +K+
Sbjct:    8 NNNNRYNNDKTMTTPSIKINFQGASRDVNVPAP-VSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDD-KKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDA-------------------------APETKKDL---IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKR 319          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.210e-82
Identity = 188/334 (56.29%), Postives = 215/334 (64.37%), Query Frame = 1
Query:   43 TRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQ 1041
            T SIKI FQG SR+V V A   TLA LQA IA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE KP NK D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNP RLV QGLAP+ LLA MK E A +N   +  T    LGD + +EDLAESVAAG+E M VEDD KKE N+GFVS +P  SAA                                               A + K+ +   +H AF+AGGI+L PREV PLLVAL V P RL KLG VN ++LRAM  A  +  +K+
Sbjct:    3 TSSIKINFQGTSRNVNVQAPF-TLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAE-AANNMKVSKVT----LGDGENNEDLAESVAAGMELMSVEDD-KKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDA-------------------------APEVKKNL---IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKR 301          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.310e-78
Identity = 178/310 (57.42%), Postives = 197/310 (63.55%), Query Frame = 1
Query:    1 NTINNNNM--NTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE-KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVEAMRVEDDDKKEWNDGFVSVEPAQSAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPRE 921
            NTI +NN   N     T SIKI FQGASRDV V A   TL  LQAAIA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISAA KE KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP RLV QGLAP+VLLA MK E A +     A   + PLGD   +EDLA+SVAAG+E M VED  KKEWNDGFVS E    AA A                                             A + K+ +   +HKAF+AGGI+L PRE
Sbjct:    2 NTIKHNNCDNNDKMMTTSSIKINFQGASRDVNVPAP-VTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLADSVAAGMELMSVED--KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDA-------------------------APEVKKNL---IHKAFIAGGIQLRPRE 275          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 7.450e-8
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query:  355 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVL 495
            LYK AARNLREY+GVPSMT   L KT+  L+L P RLV QGLAP+ +
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.090e-7
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  355 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLLA--DMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAG 615
            ++K AARNLREY+GVPS+TP  L  T+  L+L P+RLV QGLAP++LL      G +A S + +     +    ++  S DL+ + + G
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDG 129          
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.660e-7
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 1
Query:  355 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVNQGLAPQVLL 498
            LYK AARNLREY+GVPS+T   L KT+  L+L P RLV QGLAP+  L
Sbjct:   57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFL 104          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.94.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LN68_ECTSI4.270e-9458.81PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI5.400e-9156.52PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE1.820e-8956.68PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE6.500e-8956.52PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE2.770e-8756.77PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE2.210e-8256.29PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI1.310e-7857.42PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KI70_9PHAE7.450e-865.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE1.090e-741.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBH6_9PHAE3.660e-764.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:443985..448086 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2758
Hectar predicted targeting categoryother localisation
Exons2
Cds size1548
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789648.934818-UTR-P-littoralis_Contig14:443984..4440051680789648.934818-UTR-P-littoralis_Contig14:443984..444005Pylaiella littoralis U1_48UTRP-littoralis_Contig14 443985..444005 +
1680789648.967557-UTR-P-littoralis_Contig14:446897..4480861680789648.967557-UTR-P-littoralis_Contig14:446897..448086Pylaiella littoralis U1_48UTRP-littoralis_Contig14 446898..448086 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789648.9433374-CDS-P-littoralis_Contig14:444005..4443081680789648.9433374-CDS-P-littoralis_Contig14:444005..444308Pylaiella littoralis U1_48CDSP-littoralis_Contig14 444006..444308 +
1680789648.9553316-CDS-P-littoralis_Contig14:445652..4468971680789648.9553316-CDS-P-littoralis_Contig14:445652..446897Pylaiella littoralis U1_48CDSP-littoralis_Contig14 445653..446897 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.94.10prot_P-littoralis_Contig14.94.10Pylaiella littoralis U1_48polypeptideP-littoralis_Contig14 444006..446897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig14.94.10

>prot_P-littoralis_Contig14.94.10 ID=prot_P-littoralis_Contig14.94.10|Name=mRNA_P-littoralis_Contig14.94.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=516bp
MNTSTTATRSIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRS
GDDEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKE
KPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPSRLVN
QGLAPQVLLADMKGENAKSNENTAAATQQHPLGDDDCSEDLAESVAAGVE
AMRVEDDDKKEWNDGFVSVEPAQSAAPAAASATAAAAAAPAGTTTSDADA
DADGTAATTGDDDGTDTDTDADEAAKGKRPVDRPVHKAFVAGGIKLLPRE
VWPLLVALGVGPRRLVKLGHVNAEHLRAMAVAHKRVNNKQQRMTRGSAGA
AWSPWGPCGRMMQRGGGAGGGACGRRGAVAAGAGHRMGKMCGGRGKPCGR
GMTLRLHPHAPACLPPPPPFHMEDEDGMSFAPAPPAGDGGGRRGGHRGGH
GGPRSRPHHGHHAPHHHAPHPHPHGFGDGEGGSGFGRGPLLGMKGMLRAL
GRQQHQHQHGFYYWG*
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mRNA from alignment at P-littoralis_Contig14:443985..448086+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig14.94.10 ID=mRNA_P-littoralis_Contig14.94.10|Name=mRNA_P-littoralis_Contig14.94.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=4102bp|location=Sequence derived from alignment at P-littoralis_Contig14:443985..448086+ (Pylaiella littoralis U1_48)
AACACCATCAACAACAACAACATGAACACCTCCACCACTGCCACCCGTTC AATCAAGATCACCTTCCAGGGCGCCTCTCGCGATGTCGAAGTTGCGGCTG ACCAGGCCACGCTCGCCGGCCTTCAGGCGGCCATCGCGTCGGCCTTCGAG GCAGACCTGCCTCCCCGCTCCGGGGATGACGAGGCACCCAAAGACAGCGA CCTGCGGTTCACCTACAAGGACCCCGATGGAGACAGCATCGTATTCGACA AGGACTCGGAGCTGAGCCTGGCCCTGCGCCTGTGCCCCAGCTCGCTTGAG ATATCGGCCGCGGGCAAGGAGAAGGTGGAGGTAAGCGGAGAGTCCGATCT ACAGCAGTATCCCAGGACATGATGTGTTCTCTCCTGCCCGCGGCCTTGTC TGATGGCCGCCGTAAATAGGACGCGGTGTCGGCAAGTGTGGGCGCCCTCC TCTACTATTCGTGTTGTCCTTGCAGCAGTAGTTGCGCCCGTCGGGTACTC GTGTACCCAGTACACGCCGTGTTGAGTTGACGTTGTTGGACAAAGCATCC CACTTCAGTGACGCCGGATTTAGCGGCGGGCGACTCCATGATACAGTACG TCATTGAAAGCAAGTCCGCCGGAACAGGATACCACACAGACAACAACGCG AGAGTTGAACTTGGCCGCCGCCGCCGCCGCCGCTATGGAAGCCTTCCTGT CGCACTGATTGTTTCCTCTCCAAGCCGGCTTCGAGGTTTTTCCTCCAATC TGGCTTCGTGCCCTGCGTAGCTTTATTTACGGTAGTTGTTTATCCCGACG AAAGACCATTGCAAGTCTTCATTCGTTTGTCACAGGCAGGCGTTGCTGTA TCATGCTGCTGTGTGCACACATCTTCGTGAGTATCGGTTTATCTCTCACA CGACACCTTGCATTGCTACATGTCAGCTCCGGCCGTCGTTCCATCTTTCG TTGCTGTGTAATGCTGCTGTGTTTACACATCCTATAGTCTATGTATACAT CACACACATCGTATGTATGATAAATCGCATGATACAAGTACTTCGTTTCG CGTCTCGATTTATCTCTCACACGGCGCCTTCCATTGCTACATGTCGGCTC CGGAGACGTGGCCCCGCCGACCGACAAACATGGCTCTCTCTCTCTCTGTA GCTGTTTGTATATACAACCCGTCGTTCCATATTGCGTGCAGGGGGGCGAT ATGTCCCATCTATTCCTGTCCGCCCGAGATTGGCCCCGAACAGCATTAGT ACGAATTACTACTTCCGAGGTGTACAGACGGTCGATGACGCGTGTTTTTC TTTTCCCTATCTGACTCCTGACCTATGTGAATGGTTGTGCCCAAACATGA TACTCTGCTGTATCATCTGCTGTGACAATACTTGAAGTAGTTCTGTTCGT GAGCTCGATTCTCGTCTCCCTCCCAAGAGTACGTCTCGCTCGTGTCACAC GTTTTTGGTTGTACAACGATGCGCTTCTACAGCTGTGTTTTATCATATAA CAGTAGTTTAGTTCTGGCCATGAACTGATTTTGTGTTTCCTTGTGTATCC ACAACAAACAGCAGTTTGTCTGGTTCACCATTCAGGGTATCTCAACCTCC CCTCCCCTCCCCTCTCCCCCCCCCGCCTCTGCGCCTCCTCTGTCCATTCC GCCTCTCTTTACTTCCAGCCCGCCAATAAGCACGACCGCGAACACAGGCT GTACAAGGTGGCCGCCCGTAACCTCCGCGAGTACAACGGCGTGCCCTCGA TGACCCCGACGAAGCTCACCAAGACCCTGGCATTCCTCAAGCTGAACCCG AGCCGCCTCGTGAACCAGGGCCTGGCCCCCCAAGTGCTGCTGGCTGACAT GAAGGGCGAAAACGCCAAAAGCAACGAGAACACGGCGGCGGCAACGCAGC AGCATCCTCTAGGCGACGACGACTGCAGCGAGGACCTCGCCGAATCGGTC GCCGCCGGCGTCGAGGCGATGAGGGTGGAAGATGACGACAAGAAGGAGTG GAACGACGGTTTCGTGTCGGTTGAGCCCGCCCAGTCAGCCGCCCCTGCTG CTGCTTCGGCAACCGCCGCCGCGGCGGCAGCACCTGCTGGAACCACGACC TCCGATGCCGATGCCGACGCCGATGGCACCGCTGCCACCACTGGGGACGA CGACGGTACTGATACCGATACCGACGCTGATGAGGCCGCCAAGGGAAAAC GCCCCGTGGATCGCCCCGTGCACAAGGCCTTCGTCGCGGGCGGCATCAAG CTTCTGCCCCGCGAGGTCTGGCCCCTGCTCGTCGCCCTGGGCGTCGGACC CCGCCGTCTGGTCAAGCTCGGTCACGTCAACGCCGAGCACCTCCGCGCCA TGGCGGTCGCGCACAAGAGGGTGAACAACAAGCAGCAGCGCATGACCCGC GGCAGTGCTGGTGCTGCGTGGAGCCCCTGGGGGCCTTGCGGCCGCATGAT GCAGAGGGGCGGCGGTGCTGGTGGTGGTGCTTGCGGCCGCCGCGGTGCCG TTGCTGCGGGTGCGGGACACAGGATGGGAAAAATGTGCGGCGGCCGTGGG AAGCCCTGTGGACGGGGCATGACGTTGCGCCTCCACCCTCACGCCCCCGC CTGCCTCCCCCCCCCGCCCCCGTTCCACATGGAGGACGAGGACGGCATGT CGTTCGCTCCCGCTCCCCCTGCCGGTGATGGTGGCGGTCGCCGCGGTGGT CACCGTGGTGGTCATGGCGGTCCTCGCTCCCGCCCCCACCACGGCCACCA CGCCCCCCACCACCACGCCCCCCACCCCCACCCTCACGGGTTCGGGGACG GAGAGGGAGGGTCCGGTTTTGGCCGCGGCCCCCTCCTCGGGATGAAGGGA ATGCTTCGGGCTCTTGGTCGCCAGCAGCACCAGCACCAGCACGGCTTCTA CTACTGGGGGTGAGACCGCCATCGTCGCGACATCGAAGGAGGAGCCTCGC TTTATTCTGAGGATCCTAGCTTAATTTCTGCAGCTAGTACTTTTATGCTA TTGCTTTGCGTGTGTCGGTAGCTCTCCTTGTTTTGGTATAATTTGCAAAT GGGCAGAAGCCTCCCTCGGAAGAATCGATACGAGGGGCGGAGGACGGAAG GTTTGACGATACGAGAACCGTATATTACCCGTCAGGCTTTTGCGCTCATG CAGTACAACGAACGACAAGCGACGCAGATCATTTTTGGTTTTGCTTACAA ACAATCGTCCCCACGTCGACGGACGAAGTTTTCATTTTTATTTTTATTAT ACGCACGGTAGTAGTATCAATGCCTTTGTTATTTTCTTTTCTTCTCCTGT GCTCTTATCTCGAGAAGTGCGTGCTTCGCAGTGTGAACTTTTGCGATCGG CCGACGCAGAATCGACGGTCACGGTCCGTCGCGCGAGGACAGGGGTCGCA AGAGTTGGGTGGTGGGGCTTGCACTACTTGTTATCGAGACGAAAAATCCA AGGGGGGAGTAAGACGTTCATGAACAACTACCGCGGGGCTGCATGCGCAT TTGCGTACCGGATTAACATCAGAGCGGGATATATCGAGGTGATGTCCAGC AGCGTAAGAAGTCAAGACACATCGCCGAAAATACGGAGGTGAAAGCAGTA GAGGTCGCGCGGACTAAACTACCTTGCTGGAGGTTAGCTTGGTTAGCTTG CAAGTGCGGCAGTAAAGGAGTCAGTTGTGTGGTGGGTTTTGGGTTTTGGC TGAGGGAGTTGCACATCGCGCAGCGGTGTGTCTTCTCAAGGATGCGTGTA AGTTTGGTGGTGAGGGTTAAGCGATGTTTTAAGCGTTGGACGCGGTCCTT ATCGAGTCCTTGATGCTACTGCTGCCGCTGCTGCTACTTTTGTAGCGCGG AGCCGTCGTGCAGCAGCAGGGGGAGATATGTGGGTGTTTGTGTTTAAGGG TTGCAATGCTGGTTGATTTGTTTTGACATAACATGGAGGAAAGAGTACAC AACTTGTTTTGAGCTAGCTCTGTTTTAAGAAAGATAATACAAAAAAAATA AAAATGGGACCTTTGGGGTCCCAAAAAACAAATGAATACGTCCACGATGT ATCACAAACAATGGCATCCGAAGCAGGGCAAAGAAAGGAGGCCTTCCTCT CC
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Coding sequence (CDS) from alignment at P-littoralis_Contig14:443985..448086+

>mRNA_P-littoralis_Contig14.94.10 ID=mRNA_P-littoralis_Contig14.94.10|Name=mRNA_P-littoralis_Contig14.94.10|organism=Pylaiella littoralis U1_48|type=CDS|length=1548bp|location=Sequence derived from alignment at P-littoralis_Contig14:443985..448086+ (Pylaiella littoralis U1_48)
ATGAACACCTCCACCACTGCCACCCGTTCAATCAAGATCACCTTCCAGGG
CGCCTCTCGCGATGTCGAAGTTGCGGCTGACCAGGCCACGCTCGCCGGCC
TTCAGGCGGCCATCGCGTCGGCCTTCGAGGCAGACCTGCCTCCCCGCTCC
GGGGATGACGAGGCACCCAAAGACAGCGACCTGCGGTTCACCTACAAGGA
CCCCGATGGAGACAGCATCGTATTCGACAAGGACTCGGAGCTGAGCCTGG
CCCTGCGCCTGTGCCCCAGCTCGCTTGAGATATCGGCCGCGGGCAAGGAG
AAGCCCGCCAATAAGCACGACCGCGAACACAGGCTGTACAAGGTGGCCGC
CCGTAACCTCCGCGAGTACAACGGCGTGCCCTCGATGACCCCGACGAAGC
TCACCAAGACCCTGGCATTCCTCAAGCTGAACCCGAGCCGCCTCGTGAAC
CAGGGCCTGGCCCCCCAAGTGCTGCTGGCTGACATGAAGGGCGAAAACGC
CAAAAGCAACGAGAACACGGCGGCGGCAACGCAGCAGCATCCTCTAGGCG
ACGACGACTGCAGCGAGGACCTCGCCGAATCGGTCGCCGCCGGCGTCGAG
GCGATGAGGGTGGAAGATGACGACAAGAAGGAGTGGAACGACGGTTTCGT
GTCGGTTGAGCCCGCCCAGTCAGCCGCCCCTGCTGCTGCTTCGGCAACCG
CCGCCGCGGCGGCAGCACCTGCTGGAACCACGACCTCCGATGCCGATGCC
GACGCCGATGGCACCGCTGCCACCACTGGGGACGACGACGGTACTGATAC
CGATACCGACGCTGATGAGGCCGCCAAGGGAAAACGCCCCGTGGATCGCC
CCGTGCACAAGGCCTTCGTCGCGGGCGGCATCAAGCTTCTGCCCCGCGAG
GTCTGGCCCCTGCTCGTCGCCCTGGGCGTCGGACCCCGCCGTCTGGTCAA
GCTCGGTCACGTCAACGCCGAGCACCTCCGCGCCATGGCGGTCGCGCACA
AGAGGGTGAACAACAAGCAGCAGCGCATGACCCGCGGCAGTGCTGGTGCT
GCGTGGAGCCCCTGGGGGCCTTGCGGCCGCATGATGCAGAGGGGCGGCGG
TGCTGGTGGTGGTGCTTGCGGCCGCCGCGGTGCCGTTGCTGCGGGTGCGG
GACACAGGATGGGAAAAATGTGCGGCGGCCGTGGGAAGCCCTGTGGACGG
GGCATGACGTTGCGCCTCCACCCTCACGCCCCCGCCTGCCTCCCCCCCCC
GCCCCCGTTCCACATGGAGGACGAGGACGGCATGTCGTTCGCTCCCGCTC
CCCCTGCCGGTGATGGTGGCGGTCGCCGCGGTGGTCACCGTGGTGGTCAT
GGCGGTCCTCGCTCCCGCCCCCACCACGGCCACCACGCCCCCCACCACCA
CGCCCCCCACCCCCACCCTCACGGGTTCGGGGACGGAGAGGGAGGGTCCG
GTTTTGGCCGCGGCCCCCTCCTCGGGATGAAGGGAATGCTTCGGGCTCTT
GGTCGCCAGCAGCACCAGCACCAGCACGGCTTCTACTACTGGGGGTGA
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