prot_P-littoralis_Contig14.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.20.1
Unique Nameprot_P-littoralis_Contig14.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length233
Homology
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A6H5LD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD91_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.110e-16
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    1 MARLWKRFQAEKAAGTLNPTMSCRR---TGRKARDLTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWITTT 104
            +++ WK +  +K AG  +P +  +R   +G+K  D+    +AL DI LK R + R IAAALG+P +TL   + N G++  +RFLKPLLS+  K QRL WAL W+ ++
Sbjct:   33 VSKYWKLYNQKKEAGEEDPDLHNKRKGNSGQKGLDIATLKEALQDIHLKNRTTIRSIAAALGIPKSTLFDNLNNLGLRSCSRFLKPLLSDDWKAQRLAWALRWVRSS 139          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: UPI000E6FD0CA (uncharacterized protein LOC113359240 n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FD0CA)

HSP 1 Score: 73.9 bits (180), Expect = 7.170e-12
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 0
Query:   25 RTGRKARDLTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWITT---------TGMETVVHVDEKWFYGCKDDDEQKKHHPNP----PSRKLQHKRSQIAKVMFLGV 153
            R GRK  ++ P M  +  IPL+LR + R + +A  +  +T+ + +K   I+PH++ LKP L++ +KK RL ++LS +             M   VH+DEKWFY  K   E +K++  P    P R  + KR  I KVMFL V
Sbjct:   16 RAGRKRIEIDPTM--ISSIPLRLRTNIRVMESAANMSKSTIHKRIKEGAIRPHSKTLKPALTDDNKKARLLFSLSMLEDYCFANKPIFKSMYNYVHIDEKWFYMTK---ESQKYYLLPKEDEPLRSCKSKRF-ITKVMFLAV 151          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A6H5KBK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK8_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 4.730e-11
Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    3 RLWKRFQAEKAAGTLNPTMSCRR---TGRKARDLTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRL 94
            RLW R++A++ AG   P +   R   +GRK   +    + L DIPL  R +QR +AAALG+ TTTL   +K  G++ H++ LKPLL+   K   L
Sbjct:   19 RLWVRYEAQRKAGVARPKIGNLRKGNSGRKGIPIQELRERLRDIPLNDRTTQRRLAAALGIATTTLFDNLKALGLRAHSKALKPLLTGDGKLPHL 113          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A834LFV4_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LFV4_RHOSS)

HSP 1 Score: 71.2 bits (173), Expect = 1.000e-10
Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 0
Query:   25 RTGRKARDLTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWI---------TTTGMETVVHVDEKWFYGCKDDDEQKKH----HPNPPSRKLQHKRSQIAKVMFLGV 153
            R GRK   L   +  +  +P + R + R IA AL +P TT+ R +K+  ++PHT  LKP LS   K+ RL++ +S +         T   M   VH+DEKWF+  K   E K++    H N P R  + K   I KVMFL  
Sbjct:   35 RVGRKRVQLD--LNKIAALPYRQRTNIRSIAEALEVPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARLQFCMSILEPSSLQSQPTFKNMYNYVHIDEKWFFMTK---ESKRYYLLPHENEPLRTCKSKHF-IKKVMFLAA 170          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS)

HSP 1 Score: 71.2 bits (173), Expect = 1.020e-10
Identity = 51/139 (36.69%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   25 RTGRKARDLTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWI---------TTTGMETVVHVDEKWFYGCKDDDEQKK-HHPNPPSRKLQHKRSQIAKVMFLGV 153
            R GRK   L   +  +  +P   R + R IA AL +P TT+ R +K+  ++PHT  LKP LS   K+ RL++ LS +         T   M   VH+DEKWF+  K+ +      H N P R  + K   I KVMFL  
Sbjct:   84 RVGRKRVQLD--LNKIAALPYSQRTNIRSIAEALEVPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARLQFCLSMLEPSSLQSQPTFKNMYNYVHIDEKWFFMTKESERYYLLPHENEPLRTCKSKHF-ITKVMFLAA 219          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A397ATC7_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ATC7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.150e-10
Identity = 43/126 (34.13%), Postives = 65/126 (51.59%), Query Frame = 0
Query:    3 RLWKRFQAEKAAG-TLNPTMSCRRTGRKARD--LTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWITTT-------GMETVVHVDEKWFY 118
            R+WKR   + +   T+  ++  R+ G+  R    T   + +  IP   R   R +A ALG+PT+TL  Y K   I  ++  +KPLL++++K  RL WAL  +           M   VHVDEKWF+
Sbjct:   53 RIWKRASVDLSGNKTICHSVGQRKKGKSGRKQLYTDLPQRIQTIPQSRRYCFRSVAHALGMPTSTLHTYYKRGVIAKYSSVVKPLLTDSNKVCRLNWALDQVRDIDGEKFIDAMYDTVHVDEKWFF 178          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A3L6VAL4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VAL4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.300e-10
Identity = 43/126 (34.13%), Postives = 65/126 (51.59%), Query Frame = 0
Query:    3 RLWKRFQAEKAAG-TLNPTMSCRRTGRKARD--LTPFMKALHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWITTT-------GMETVVHVDEKWFY 118
            R+WKR   + +   T+  ++  R+ G+  R    T   + +  IP   R   R +A ALG+PT+TL  Y K   I  ++  +KPLL++++K  RL WAL  +           M   VHVDEKWF+
Sbjct:   53 RIWKRASVDLSGNKTIFHSVGQRKKGKSGRKQLYTDLPQRIQTIPQSRRYCFRSVAHALGMPTSTLHTYYKRGVIAKYSSVVKPLLTDSNKVCRLNWALDQVRDIDGEKFIDAMYDTVHVDEKWFF 178          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A6A4ZII4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZII4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.020e-9
Identity = 46/150 (30.67%), Postives = 78/150 (52.00%), Query Frame = 0
Query:   39 ALHDIPLKLRMSQRGIAAALGLPTTTLTRYMK-NHGIKPHTRFLKPLLSNTSKKQRLEWALSWITTT----GMETVVHVDEKWFYGCKD-------DDEQKKHHPNPPSRKLQHKRSQIAKVMFLGVGSAAAAQHLQQIGFQREDRNIPL 176
            A+  +P   R + R +A   G+P +T+ R+MK N  ++  + +L+PLL+  +K++R+++ALS++        M  VVHVDEKWF+  K+       DDE        P R+ + KR     V      +    +H   +  +REDR++ L
Sbjct:   16 AIKSVPFHKRQTTRALAFHSGVPRSTILRHMKRNRRLRCKSSYLRPLLTEDNKEERMKFALSFVKKNHVFDDMHDVVHVDEKWFFLTKNKGKFYVYDDE------TLPHRQSKSKRFITNNVPLCCCAAPVRCKHPPHV--RREDRDVAL 157          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A397AVS4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AVS4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.900e-9
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   39 ALHDIPLKLRMSQRGIAAALGLPTTTLTRYMK-NHGIKPHTRFLKPLLSNTSKKQRLEWALSWITT---TGMETVVHVDEKWFYGCKD-------DDEQKKHHPNPPSRKLQHKRSQIAKVMFL 151
            A+  +P   R + R +A   G+P +T+ R+MK N  ++  + +L+PLL+  +K++R+++ALS++       M  VVHVDEKWF+  K+       DDE        P R+ + KR  I KVMFL
Sbjct:  106 AIKSVPFHKRQTTRALAFHSGVPRSTILRHMKRNRRLRCKSSYLRPLLTEDNKEERMKFALSFVKNHVFDDMHDVVHVDEKWFFLTKNKGKFYVYDDE------TLPHRQSKSKRF-ITKVMFL 222          
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A6A3GJY0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GJY0_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.400e-9
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   40 LHDIPLKLRMSQRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSWITT---------TGMETVVHVDEKWF 117
            +  +PL LR +QR +AAALG+P +TL RY+K   ++     +KP L+   KK+RLE+AL  +             M  VVH+DEKWF
Sbjct:   83 VESVPLPLRQTQRSLAAALGIPRSTLQRYVKAGLLRRRFSTVKPRLTAEHKKRRLEFALKHVCPPMGLRKPRFVDMYDVVHIDEKWF 169          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LD91_9PHAE2.110e-1642.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000E6FD0CA7.170e-1236.62uncharacterized protein LOC113359240 n=2 Tax=Papav... [more]
A0A6H5KBK8_9PHAE4.730e-1141.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A834LFV4_RHOSS1.000e-1036.62Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A834LPB9_RHOSS1.020e-1036.69Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A397ATC7_9STRA1.150e-1034.13Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A3L6VAL4_9STRA1.300e-1034.13Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4ZII4_9STRA1.020e-930.67Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A397AVS4_9STRA1.900e-936.29Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A3GJY0_9STRA2.400e-941.38Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 75..190
e-value: 9.1E-10
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..232
NoneNo IPR availablePANTHERPTHR33889:SF7OS04G0681850 PROTEINcoord: 3..105
NoneNo IPR availablePANTHERPTHR33889OS04G0681850 PROTEINcoord: 3..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:78015..78737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.20.1mRNA_P-littoralis_Contig14.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 77886..79135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.20.1 ID=prot_P-littoralis_Contig14.20.1|Name=mRNA_P-littoralis_Contig14.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
MARLWKRFQAEKAAGTLNPTMSCRRTGRKARDLTPFMKALHDIPLKLRMS
QRGIAAALGLPTTTLTRYMKNHGIKPHTRFLKPLLSNTSKKQRLEWALSW
ITTTGMETVVHVDEKWFYGCKDDDEQKKHHPNPPSRKLQHKRSQIAKVMF
LGVGSAAAAQHLQQIGFQREDRNIPLHGANDCPARRNAQQCCRDGGDQDS
GDNQGALQEDADRPRDPRYQEPVVPPPCRCQP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf