mRNA_P-littoralis_Contig14.20.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 152 bits (383), Expect = 4.500e-39 Identity = 77/170 (45.29%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 605 RNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVEITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
R T+ +F+GK+GI+ FT + AQR + + AA T+ TK VE+TKE +++ ++D V P IK++ P G RT+ +Q DN P + IN DP+++AA ADGWDIRL+NQP + PDTN+ DLG N++QSLQ+ PR++D+ I VK A+ P+ +VW+SLQ
Sbjct: 80 RKTNRCCNFTGKLGIFQFTVQRAAQRN-SRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARW---PGGRG---RTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQ 242
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: UPI00053F43DC (uncharacterized protein LOC104894846 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F43DC) HSP 1 Score: 136 bits (342), Expect = 4.120e-32 Identity = 76/182 (41.76%), Postives = 109/182 (59.89%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVE-ITKERYRKMLIDHVIPDIKSQLSRPPAGASPED--RTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
F+ ARPR N F+GKIGI+ FT+++ AQR +++ T+ TK +E ITK+ R ML+ ++P I+ + P+D + + +QQDNAP ++ NDDP DG+D RL+ QPP+ PD N DLG S+Q+LQ +PR+ID L+ AV E+W P LS VW+SLQ
Sbjct: 227 FIAAVARPRWNQDGSCAFNGKIGIWAFTKQVPAQR-RSNNRPRGTLETKPIEAITKDVIRDMLVHKIMPAIREKW--------PDDLSKVIYIQQDNAPAHITNDDPIFQQHRLLDGFDFRLIQQPPNSPDMNCLDLGYFRSLQTLQYKKSPRTIDQLVTAVNESWEELHPKTLSNVWMSLQ 399
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.090e-31 Identity = 79/181 (43.65%), Postives = 110/181 (60.77%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVEITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCV--QQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
FL ARPR N + F GKIG + FTE + AQR + + + T+VT V ++++ YR ML+++VIP IK++ P+ RT C+ QQDNA ++ D +LAA ADGWDI + QPP+ PD NV DLG +IQSLQ T R+ID+LI A AWV+ + L+ +L+LQ
Sbjct: 204 FLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRN-SRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKW--------PDARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQ 375
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: UPI00053FA15F (uncharacterized protein LOC104905014 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FA15F) HSP 1 Score: 132 bits (332), Expect = 1.100e-30 Identity = 74/180 (41.11%), Postives = 106/180 (58.89%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVE-ITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
F+ ARPR N F GKIGI+PFT+++ AQR + + T+ TK ++ ITK+ R ML++ ++P I+ + P S + + +QQDNAP ++ NDDP G+D RL+ QPP+ PD N+ DLG +Q+LQ +PR ID L+ AV E+W P LS VW+SLQ
Sbjct: 233 FMAAVARPRWNQDGSCAFDGKIGIWPFTKQVPAQRS-SDNRPRGTLETKPIDAITKDVIRDMLVNKIMPAIREKW---PNDLS---KVIYIQQDNAPCHINNDDPVFQQHRLLHGFDFRLIQQPPNSPDMNILDLGYFRVLQTLQYRKSPRKIDQLVAAVNESWEELHPKTLSNVWMSLQ 405
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: UPI0010A3C137 (uncharacterized protein LOC114738342 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3C137) HSP 1 Score: 127 bits (318), Expect = 1.160e-30 Identity = 69/179 (38.55%), Postives = 103/179 (57.54%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVEITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
FL ARPR ++ FSGKIG++P + +R + A V ITKE R+ LI+HV+P IK + R G + +QQDNA Y+ DD E + DG++IRL+NQPP+ PD N+ DLG N IQSLQ AP+++DDLI A+ +++ + ++++L+L+
Sbjct: 2 FLVAVARPRFDSEGNKIFSGKIGVFPLVRQEPTKRNSINRRAGSLVTKPIASITKEVSRQFLIEHVVPAIKEKWPRDSIG-----EPIYIQQDNARCYIDPDDNEFCRVATEDGFNIRLMNQPPNSPDLNILDLGFFNGIQSLQYKEAPKTVDDLIAAMVKSFESFLAVKSNKIFLTLK 175
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS) HSP 1 Score: 132 bits (331), Expect = 1.190e-30 Identity = 81/180 (45.00%), Postives = 110/180 (61.11%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTV-EITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
FL ARPR +T+ +FSGKIGI+PFT + A+R + + A T+ TK V +TKE RK LI+ V+P I+++ P G E T+ +QQDNA ++ D E L S DG+DIRL QPP+ PD NV DLG +IQSLQ AP++ID+L+ V A+ P L V+L+LQ
Sbjct: 216 FLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKR-TSKNRVAGTLETKVVVSVTKEIIRKCLIEKVLPAIRAKW---PRGNGIE--TILIQQDNARPHIREFDAEFLEEASKDGFDIRLSFQPPNSPDLNVLDLGFFRAIQSLQYQKAPKNIDELVSVVVSAFEELSPQTLDNVFLTLQ 389
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: W4HAZ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAZ6_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.940e-30 Identity = 74/179 (41.34%), Postives = 105/179 (58.66%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVEITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
FL ARPR + + GKIG + FTE++ R + + A T+ TK V +T++ YR MLIDHVIP IK++ P G E R + +QQDNA ++ D ++ A ++DGW + L QPP+ PD NV DLG +IQSLQ R++DD++ A EAW P L+ +L+LQ
Sbjct: 3 FLSAVARPRWDNEKSALVDGKIGTWHFTEQVPVIRA-SRNRPAGTLETKPVSVTRDMYRAMLIDHVIPAIKAKW---PVG---ESRRIIIQQDNARPHVPPLDSRIVDACTSDGWMMELKYQPPNSPDLNVLDLGFFRAIQSLQEKNYSRNVDDIVAASDEAWKQVEPMTLNANFLTLQ 174
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC) HSP 1 Score: 127 bits (318), Expect = 2.400e-30 Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVEITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
FL + ARPR +++N +FSGKIGI+PFT + AQR + A + +TK+ R LI+ V+P I+S+ R S + +QQDNA ++ +D E L S DG+DIRL QPP+ PD NV DLG +IQSLQ AP +ID+L++AV+E++ L+ V+L+ Q
Sbjct: 32 FLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTKDVIRSCLINKVLPAIRSKWPR-----SSNMEPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPPNSPDFNVLDLGYFRAIQSLQYRYAPSTIDELVQAVQESFENLSSKNLNYVFLTFQ 205
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS) HSP 1 Score: 130 bits (326), Expect = 5.960e-30 Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVE-ITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNAPHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQ 1114
FL ARPR + +FSGKIGI+PFT + A+R + + A T+ TK V +TK+ R LI+ VIP I+S+ + G T+ +QQDNA ++ +D E A + +G+DIRL NQP + PD NV DLG N+IQSLQ+ APR+ID L+ AV++++ P L V+LSLQ
Sbjct: 217 FLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKR-TSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVG-----ETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQ 390
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Match: A0A485K749_9STRA (Aste57867_1740 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K749_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.070e-30 Identity = 76/182 (41.76%), Postives = 110/182 (60.44%), Query Frame = 2
Query: 578 FLGLGARPRRNTSNKSDFSGKIGIYPFTERMIAQRGETHSNAAETVVTKTVEITKERYRKMLIDHVIPDIKSQLSRPPAGASPEDRTVCVQQDNA-PHYLINDDPELLAAMSADGWDIRLVNQPPDGPDTNVFDLGVSNSIQSLQNCTAPRSIDDLIEAVKEAWVADPPTVLSRVWLSLQPA 1120
FL +RPR + + K F GKIG++PF E+ A R + + T++T TV + E Y M++DHVIP IKS++ R + R V +QQDNA PH ++ E+L A G +++ NQPP+ PD NV DLG NSIQSLQ+ ++++DLI AV+ A+ P L+R ++SLQ A
Sbjct: 2 FLAAVSRPRFDINMKCIFDGKIGVWPFVEQSSAARS-SKNRPKGTMLTTTVSVDSEVYTNMIVDHVIPAIKSKMPR-----CTQRRGVIIQQDNATPHRCVS--TEMLKASRIHG--VKVSNQPPNSPDFNVLDLGFFNSIQSLQHQKMTQTVEDLIGAVENAFHEMPADTLARTFVSLQSA 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.20.1 >prot_P-littoralis_Contig14.20.1 ID=prot_P-littoralis_Contig14.20.1|Name=mRNA_P-littoralis_Contig14.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp MARLWKRFQAEKAAGTLNPTMSCRRTGRKARDLTPFMKALHDIPLKLRMSback to top mRNA from alignment at P-littoralis_Contig14:77886..79135+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.20.1 ID=mRNA_P-littoralis_Contig14.20.1|Name=mRNA_P-littoralis_Contig14.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1250bp|location=Sequence derived from alignment at P-littoralis_Contig14:77886..79135+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:77886..79135+ >mRNA_P-littoralis_Contig14.20.1 ID=mRNA_P-littoralis_Contig14.20.1|Name=mRNA_P-littoralis_Contig14.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=699bp|location=Sequence derived from alignment at P-littoralis_Contig14:77886..79135+ (Pylaiella littoralis U1_48)back to top |