mRNA_P-littoralis_Contig1399.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 279 bits (713), Expect = 1.290e-85 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1
Query: 25 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 651
SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV
Sbjct: 399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 607
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 212 bits (540), Expect = 2.710e-63 Identity = 158/217 (72.81%), Postives = 166/217 (76.50%), Query Frame = 1
Query: 1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 651
MPSTLSKASGSVER +ATTDIDRRCGDTN TPLMVASVIGSSRVV+DLLRQGASVS+ADSDGY ALHH+VYH+HLAVS LIEAGADL+ARPG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NPLLSA ELV+WYGTD CT+DGG LALATAASR VDIVTFLCDAGV
Sbjct: 1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGV 217
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 186 bits (473), Expect = 2.490e-56 Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 1
Query: 1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEM 333
MPSTLSKASGS++ IATT IDR CGDTNQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDG ALHH+VYH HLAVSKDLIEAGADL+AR GG DTPLHVAATKGFCQ M
Sbjct: 1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGM 111
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 183 bits (464), Expect = 7.220e-50 Identity = 150/217 (69.12%), Postives = 154/217 (70.97%), Query Frame = 1
Query: 1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 651
MPSTLSKASGS + IATTDIDRRCG TNQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NPLLSA ELV+WYGTD CTSDGGALALATAASR VDIV FLC+AGV
Sbjct: 422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGV 638
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.150e-46 Identity = 160/218 (73.39%), Postives = 162/218 (74.31%), Query Frame = 1
Query: 1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA-DXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 651
MPSTLSKASGS + IATTDIDRRCGDTNQTPLMVASVIG SRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSA XXXXXXXXXX ELVYWYG D CTSDGGALAL TAASR VDIVTFL DAGV
Sbjct: 7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGV 224
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 110 bits (275), Expect = 7.410e-25 Identity = 79/224 (35.27%), Postives = 104/224 (46.43%), Query Frame = 1
Query: 22 ASGSVERPI-----ATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGI---------DTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 651
+SGSVER + T+IDRRC + T LM A+ G R+VR LLR GA VS++ DG+ ALH A+ ++LAV+K LI+AGA+++A+ + TPLH+AA +GFC+ M NPLL ELV +G DGC +G AL TAA N I+TFL DAGV
Sbjct: 26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGV 249
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.120e-23 Identity = 80/191 (41.88%), Postives = 95/191 (49.74%), Query Frame = 1
Query: 103 VASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPG-----GID-TPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA--DXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 651
VAS +G RVVR LLR GA VS AD+DG ALH ++ +KHLAVSK L++AGADL+AR G+ TPLHVAA KGF + M NP+L+A EL +G DGC+ DGGA AL AAS+NQVDIVTFL D GV
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKA-------------------------NPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGV 202
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: UPI001C049DCF (putative palmitoyltransferase ZDHHC13 isoform X2 n=2 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C049DCF) HSP 1 Score: 65.1 bits (157), Expect = 1.080e-8 Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 61 IDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATK 315
+D+ GD N TPL A G +V LLR GA +SLAD +GY ALH A+ +H+AV+ L+ G ++D TPL +AA K
Sbjct: 132 VDQLGGDLNSTPLHWAIRQGHLPMVIQLLRYGADLSLADGEGYHALHLAILFQHMAVAAYLMAKGQEVDGPDSNGQTPLMLAAQK 216
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: Q4TDF9_TETNG (Chromosome undetermined SCAF6289, whole genome shotgun sequence (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4TDF9_TETNG) HSP 1 Score: 62.4 bits (150), Expect = 1.690e-8 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 61 IDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATK 315
+D+ GD + TPL A G +V LLR GA S+AD +GY ALH A+ +H+A++ L+ G D+D + TP+ +AA K
Sbjct: 105 VDQLGGDLSSTPLHWAIRQGHLSMVIQLLRYGADPSIADGEGYRALHLAILFQHMAIAAYLMAKGQDVDEQDANGQTPVMLAALK 189
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Match: Q4SHA5_TETNG ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SHA5_TETNG) HSP 1 Score: 62.4 bits (150), Expect = 8.780e-8 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 61 IDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATK 315
+D+ GD + TPL A G +V LLR GA S+AD +GY ALH A+ +H+A++ L+ G D+D + TP+ +AA K
Sbjct: 78 VDQLGGDLSSTPLHWAIRQGHLSMVIQLLRYGADPSIADGEGYRALHLAILFQHMAIAAYLMAKGQDVDEQDANGQTPVMLAALK 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1399.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1399.11.1 >prot_P-littoralis_Contig1399.11.1 ID=prot_P-littoralis_Contig1399.11.1|Name=mRNA_P-littoralis_Contig1399.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRback to top mRNA from alignment at P-littoralis_Contig1399:14620..15270- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1399.11.1 ID=mRNA_P-littoralis_Contig1399.11.1|Name=mRNA_P-littoralis_Contig1399.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig1399:14620..15270- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1399:14620..15270- >mRNA_P-littoralis_Contig1399.11.1 ID=mRNA_P-littoralis_Contig1399.11.1|Name=mRNA_P-littoralis_Contig1399.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig1399:14620..15270- (Pylaiella littoralis U1_48)back to top |