mRNA_P-littoralis_Contig1397.1.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FN09_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN09_9EUKA) HSP 1 Score: 275 bits (703), Expect = 7.140e-88 Identity = 129/261 (49.43%), Postives = 164/261 (62.84%), Query Frame = 2
Query: 44 VIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKSGFDSTQCSDASISGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCD 826
VI +L G+KVMCY SAG+ E +R D +++PA VKGGI++F GDTF +EAWLDLRR+D++ P+MLER+D+ + KGCDAIE+DNAD HT L GD I L Q+ N W+ AQ H RGMGVA+KN+ A F D YDMVVNEEC++ GNC NYWP++ K +LN EY T C +C +A ME STIKK P L C VDC + + C + G + WCPM N DE P+ R+ TCD
Sbjct: 106 VIKELHKDGRKVMCYFSAGSWEMWRKDADMYPASVKGGILSFASGDTFSNEAWLDLRRMDVIGPLMLERLDVAQQKGCDAIEFDNADTVTHTAKLGGD--IELRTQLRVNKWLVAQAHVRGMGVALKNSEMFATFLSDTYDMVVNEECFVMGNCDNYWPFLNREKPVLNCEYTTALCFYCKRAKAMEFSTIKKTPALDACMVDCSHDYSESVCKATGYTDATGKQWKHAKYDGKKNKDGWCPMAQNKQKDESPAKRYGTCD 364
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FCU9_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCU9_9EUKA) HSP 1 Score: 274 bits (700), Expect = 8.060e-87 Identity = 133/274 (48.54%), Postives = 173/274 (63.14%), Query Frame = 2
Query: 35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKSGFDSTQCS-----DASIS-GVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDLFVG 838
++ VI+ L G+KVMCY SAG+ E+FR D ++GG + FGEGD F DEAWLDLRR+D+ +MLER+D+ + KGCDAIE+DN D+ +H + G L +Q+ +N W+A Q HARGM VA+KN+NE F D +DMVVNEECWINGNC +YWP+I K +LN EYFT+ CM+C +A M STIKK P L C C +D+++C DAS S YP ++ WCPMT N DA EC + RF TCD +G
Sbjct: 151 SATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMFLEVMLERIDLARDKGCDAIEYDNLDMIIHDHNIPG-AEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFNMFLADTFDMVVNEECWINGNCDHYWPFINRDKPVLNCEYFTSLCMYCDRAAKMNFSTIKKNPPLDACLATCSQEYDTSRCEGVNFPDASGSYAAAKYPN---------LANGWCPMTTNVDAVECENPRFKTCDPAIG 414
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FMI3_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FMI3_9EUKA) HSP 1 Score: 275 bits (702), Expect = 2.950e-85 Identity = 138/275 (50.18%), Postives = 181/275 (65.82%), Query Frame = 2
Query: 29 TPASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDC--KSGFDSTQCSDA---SISGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDLFVG 838
TP S IA L + G++VMCY SAG++E +R D LFPA ++GG + FG GD F DEAWLDLRR D++ PIM+ R+D KAKGCDA+E+DN D+ +H GL+G+ I L++Q+ ++ W Q HARGM VA+KN+NE A D YDMVVNEE +INGN NYWP++ K +LNTEYFT+RC +C + M +STIKK PDL +C VDC + + T D+ SG YP +E WCP+T+N DA+EC + RFA CD G
Sbjct: 310 TPDST-IASLHAAGRRVMCYFSAGSTEKWRIDQELFPAFIQGGPLLFGTGDVFDDEAWLDLRRFDIIGPIMMNRLDAAKAKGCDAVEFDNPDIVIHEHGLAGN--IDLTLQLQFDKWCVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRDKPVLNTEYFTSRCFYCATSRAMGVSTIKKRPDLDSCLVDCTMEMPLNVTSVCDSIGFEASGRARYPAS---------AEGWCPLTLNLDANECAAPRFAECDPSYG 572
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FQ33_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQ33_9EUKA) HSP 1 Score: 278 bits (710), Expect = 1.210e-84 Identity = 139/275 (50.55%), Postives = 182/275 (66.18%), Query Frame = 2
Query: 29 TPASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKSGFD---STQCSDASI--SGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDLFVG 838
TPAS IA L + G+KVMCY SAG+ ED+R D LFP +KGG + FGEGD F DEAWLD+RR+D++APIM++R+D KAKGCDA+E+DN D+ +H GL +G I L++Q+ ++ W Q HARGM VA+KN+NE A D YDMVVNEE +INGN NYWP++ +K +LNTEYFT+RC +C A M +STIKK PDL +C VDC ++ C D +G +P + ++ WCPMT NTD EC + RF C+ G
Sbjct: 497 TPAST-IASLHAAGRKVMCYFSAGSYEDWRMDRALFPEFIKGGPLMFGEGDVFTDEAWLDIRRIDIIAPIMMDRLDAAKAKGCDALEFDNPDVIIHEHGL--EGNIDLTLQLQFDIWGVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRNKPVLNTEYFTSRCFYCATAKAMGVSTIKKRPDLDSCMVDCTMDIPLSVTSVCDDIGFHTAGKAKFPAN---------ADGWCPMTENTDIAECANTRFGECEPSYG 759
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FQP7_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQP7_9EUKA) HSP 1 Score: 196 bits (499), Expect = 1.160e-58 Identity = 88/164 (53.66%), Postives = 117/164 (71.34%), Query Frame = 2
Query: 35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWI 526
++ VI+ L G+KVMCY SAG+ E+FR D ++GG + FGEGD F DEAWLDLRR+D++ +MLER+D+ + KGCDAIE+DN D+ +H + G L +Q+ +N W+A Q HARGM VA+KN+NE + F D +DMVVNEECWI GNC NYWP+I
Sbjct: 88 SATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMILEVMLERIDLARDKGCDAIEYDNLDMYIHDHNIPG-AEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFSMFLADTFDMVVNEECWIFGNCDNYWPFI 250
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE) HSP 1 Score: 162 bits (410), Expect = 4.200e-45 Identity = 84/210 (40.00%), Postives = 125/210 (59.52%), Query Frame = 2
Query: 35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSV--QIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
++++I+ L+S+GKKV+CY+SAG+ E++RDD N+FP EV G + D +PDE WLD+ R+D++ PIML RMD+ KGCD IE DN D G S D +L+ Q+ YN W+A HAR + + +KN+ + V +D +NE+C+ C P++ A K + EY + FC+QAN M +KK L + RV C+
Sbjct: 71 SASMISLLKSQGKKVICYMSAGSWENYRDDANVFPEEVLGKYL-----DGWPDERWLDISRIDILGPIMLRRMDLAVEKGCDGIEPDNID------GYSNDSGFALTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLPFVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSCR 269
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A1F5JF22_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_40_11 TaxID=1797762 RepID=A0A1F5JF22_9BACT) HSP 1 Score: 157 bits (397), Expect = 5.160e-43 Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 2
Query: 35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
+++V+A L++ GKKV+CY SAG+ E++R D N FP VKG + +P E WLD+RRLD++ PIM R+D+ K KGCD +E DN D + G ++ QI YN W A HARG+ V +KN+ E + YD +NE+C+ C ++ A K + N EY FC QAN M +++KK DL RV C+
Sbjct: 85 SASVVASLKNSGKKVICYYSAGSWENWRPDANQFPDSVKGN------SNGWPGEKWLDIRRLDVLGPIMSARLDLAKQKGCDGVEPDNVDGYTNNTGFP----LTYQDQINYNKWTANAAHARGLSVGLKNDIEQVNDLLSYYDWTLNEQCFQYNECDPLTKFVQAGKAVFNVEYKLDTSQFCPQANSMNFNSLKKNLDLDAYRVACR 282
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A2V8BTK0_9BACT (Endo alpha-1,4 polygalactosaminidase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8BTK0_9BACT) HSP 1 Score: 155 bits (391), Expect = 2.560e-42 Identity = 82/211 (38.86%), Postives = 121/211 (57.35%), Query Frame = 2
Query: 35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQ--IAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKS 661
+S V+A L +KG++ +CY+SAGT E++R D FPA V GG G+ +P E WLD+RR+D++ PIM RMD+ K KG DA+E DN D G S + +L+ Q + YN W+AAQ HARG+ + +KN+ + + V +D +NE+C+ C P+ A K + EY T FC +A ++ + +KK DL C S
Sbjct: 64 SSTVVASLHAKGRRAVCYMSAGTWENWRPDAAAFPAAVLGG------GNGWPGEKWLDIRRIDVLGPIMEARMDLCKQKGFDALEPDNID------GYSNNSGFALTAQDQLTYNKWLAAQAHARGLSIGLKNDLDQVSQLVTSFDWAINEQCFEYNECNLLAPFTQAGKAVFEVEYSLTPAQFCDKAVALKFNALKKGLDLDAAVTACPS 262
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A3D4Z2E0_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D4Z2E0_9DELT) HSP 1 Score: 154 bits (388), Expect = 5.180e-42 Identity = 82/206 (39.81%), Postives = 121/206 (58.74%), Query Frame = 2
Query: 41 AVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
+VI +L S G+KV+CY SAG+ E++R D N FP+ VKG + +P E WLD+RRLD++ PIM R+D+ AKGCD +E DN D + G +++ Q+ YN ++AA+ HARG+ V +KN+ + V +D +NE+C+ C P+I A K + N EY FC +AN M +++KK DL RV C+
Sbjct: 58 SVIDELHSAGRKVICYFSAGSWENWRPDANQFPSSVKG------RNNGWPGEKWLDIRRLDILGPIMKARLDLAVAKGCDGVEPDNVDGYSNRSGF----KLTYQDQLHYNKFLAAEAHARGLSVGLKNDVDQVKDLVAFFDWTLNEQCFEYRECDTLLPFIKAGKAVFNVEYKGNTNNFCPKANAMNFNSMKKHLDLDAWRVPCR 253
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A2V9F641_9BACT (Glyco_hydro_114 domain-containing protein (Fragment) n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9F641_9BACT) HSP 1 Score: 152 bits (383), Expect = 1.110e-41 Identity = 80/206 (38.83%), Postives = 121/206 (58.74%), Query Frame = 2
Query: 41 AVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
+V+A L ++G+KV+CYISAGT E++R D FPA VKG V+ +P E WLD+RRLD++ PIM R+D+ + KG D +E DN D + GL ++ QI YN ++A Q HARG+ VA+KN+ + + +D +NE+C+ C P+I A K + EY + FC QAN + + ++K +L R+ C+
Sbjct: 23 SVVASLHAQGRKVICYISAGTFENWRPDAASFPAVVKGNAVS-----GWPGENWLDIRRLDILGPIMTARLDLCQTKGFDGVEPDNIDGYANGTGLP----LTAQDQINYNTFLANQAHARGLSVALKNDLDQVQALLPYFDWALNEQCFQYNECNTLVPFITAGKAVFEVEYSLSTSQFCPQANALNFNAMQKNLNLDAFRIPCR 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1397.1.2 >prot_P-littoralis_Contig1397.1.2 ID=prot_P-littoralis_Contig1397.1.2|Name=mRNA_P-littoralis_Contig1397.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=279bp MWNCTISTTPASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGback to top mRNA from alignment at P-littoralis_Contig1397:167..2415- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1397.1.2 ID=mRNA_P-littoralis_Contig1397.1.2|Name=mRNA_P-littoralis_Contig1397.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2249bp|location=Sequence derived from alignment at P-littoralis_Contig1397:167..2415- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1397:167..2415- >mRNA_P-littoralis_Contig1397.1.2 ID=mRNA_P-littoralis_Contig1397.1.2|Name=mRNA_P-littoralis_Contig1397.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=837bp|location=Sequence derived from alignment at P-littoralis_Contig1397:167..2415- (Pylaiella littoralis U1_48)back to top |