mRNA_P-littoralis_Contig1397.1.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1397.1.2
Unique NamemRNA_P-littoralis_Contig1397.1.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FN09_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN09_9EUKA)

HSP 1 Score: 275 bits (703), Expect = 7.140e-88
Identity = 129/261 (49.43%), Postives = 164/261 (62.84%), Query Frame = 2
Query:   44 VIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKSGFDSTQCSDASISGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCD 826
            VI +L   G+KVMCY SAG+ E +R D +++PA VKGGI++F  GDTF +EAWLDLRR+D++ P+MLER+D+ + KGCDAIE+DNAD   HT  L GD  I L  Q+  N W+ AQ H RGMGVA+KN+   A F  D YDMVVNEEC++ GNC NYWP++   K +LN EY T  C +C +A  ME STIKK P L  C VDC   +  + C     +             G    + WCPM  N   DE P+ R+ TCD
Sbjct:  106 VIKELHKDGRKVMCYFSAGSWEMWRKDADMYPASVKGGILSFASGDTFSNEAWLDLRRMDVIGPLMLERLDVAQQKGCDAIEFDNADTVTHTAKLGGD--IELRTQLRVNKWLVAQAHVRGMGVALKNSEMFATFLSDTYDMVVNEECFVMGNCDNYWPFLNREKPVLNCEYTTALCFYCKRAKAMEFSTIKKTPALDACMVDCSHDYSESVCKATGYTDATGKQWKHAKYDGKKNKDGWCPMAQNKQKDESPAKRYGTCD 364          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FCU9_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCU9_9EUKA)

HSP 1 Score: 274 bits (700), Expect = 8.060e-87
Identity = 133/274 (48.54%), Postives = 173/274 (63.14%), Query Frame = 2
Query:   35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKSGFDSTQCS-----DASIS-GVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDLFVG 838
            ++ VI+ L   G+KVMCY SAG+ E+FR D       ++GG + FGEGD F DEAWLDLRR+D+   +MLER+D+ + KGCDAIE+DN D+ +H   + G     L +Q+ +N W+A Q HARGM VA+KN+NE   F  D +DMVVNEECWINGNC +YWP+I   K +LN EYFT+ CM+C +A  M  STIKK P L  C   C   +D+++C      DAS S     YP          ++  WCPMT N DA EC + RF TCD  +G
Sbjct:  151 SATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMFLEVMLERIDLARDKGCDAIEYDNLDMIIHDHNIPG-AEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFNMFLADTFDMVVNEECWINGNCDHYWPFINRDKPVLNCEYFTSLCMYCDRAAKMNFSTIKKNPPLDACLATCSQEYDTSRCEGVNFPDASGSYAAAKYPN---------LANGWCPMTTNVDAVECENPRFKTCDPAIG 414          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FMI3_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FMI3_9EUKA)

HSP 1 Score: 275 bits (702), Expect = 2.950e-85
Identity = 138/275 (50.18%), Postives = 181/275 (65.82%), Query Frame = 2
Query:   29 TPASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDC--KSGFDSTQCSDA---SISGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDLFVG 838
            TP S  IA L + G++VMCY SAG++E +R D  LFPA ++GG + FG GD F DEAWLDLRR D++ PIM+ R+D  KAKGCDA+E+DN D+ +H  GL+G+  I L++Q+ ++ W   Q HARGM VA+KN+NE A    D YDMVVNEE +INGN  NYWP++   K +LNTEYFT+RC +C  +  M +STIKK PDL +C VDC  +   + T   D+     SG   YP           +E WCP+T+N DA+EC + RFA CD   G
Sbjct:  310 TPDST-IASLHAAGRRVMCYFSAGSTEKWRIDQELFPAFIQGGPLLFGTGDVFDDEAWLDLRRFDIIGPIMMNRLDAAKAKGCDAVEFDNPDIVIHEHGLAGN--IDLTLQLQFDKWCVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRDKPVLNTEYFTSRCFYCATSRAMGVSTIKKRPDLDSCLVDCTMEMPLNVTSVCDSIGFEASGRARYPAS---------AEGWCPLTLNLDANECAAPRFAECDPSYG 572          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FQ33_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQ33_9EUKA)

HSP 1 Score: 278 bits (710), Expect = 1.210e-84
Identity = 139/275 (50.55%), Postives = 182/275 (66.18%), Query Frame = 2
Query:   29 TPASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKSGFD---STQCSDASI--SGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDLFVG 838
            TPAS  IA L + G+KVMCY SAG+ ED+R D  LFP  +KGG + FGEGD F DEAWLD+RR+D++APIM++R+D  KAKGCDA+E+DN D+ +H  GL  +G I L++Q+ ++ W   Q HARGM VA+KN+NE A    D YDMVVNEE +INGN  NYWP++  +K +LNTEYFT+RC +C  A  M +STIKK PDL +C VDC        ++ C D     +G   +P +         ++ WCPMT NTD  EC + RF  C+   G
Sbjct:  497 TPAST-IASLHAAGRKVMCYFSAGSYEDWRMDRALFPEFIKGGPLMFGEGDVFTDEAWLDIRRIDIIAPIMMDRLDAAKAKGCDALEFDNPDVIIHEHGL--EGNIDLTLQLQFDIWGVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRNKPVLNTEYFTSRCFYCATAKAMGVSTIKKRPDLDSCMVDCTMDIPLSVTSVCDDIGFHTAGKAKFPAN---------ADGWCPMTENTDIAECANTRFGECEPSYG 759          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A0L0FQP7_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQP7_9EUKA)

HSP 1 Score: 196 bits (499), Expect = 1.160e-58
Identity = 88/164 (53.66%), Postives = 117/164 (71.34%), Query Frame = 2
Query:   35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWI 526
            ++ VI+ L   G+KVMCY SAG+ E+FR D       ++GG + FGEGD F DEAWLDLRR+D++  +MLER+D+ + KGCDAIE+DN D+ +H   + G     L +Q+ +N W+A Q HARGM VA+KN+NE + F  D +DMVVNEECWI GNC NYWP+I
Sbjct:   88 SATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMILEVMLERIDLARDKGCDAIEYDNLDMYIHDHNIPG-AEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFSMFLADTFDMVVNEECWIFGNCDNYWPFI 250          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE)

HSP 1 Score: 162 bits (410), Expect = 4.200e-45
Identity = 84/210 (40.00%), Postives = 125/210 (59.52%), Query Frame = 2
Query:   35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSV--QIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
            ++++I+ L+S+GKKV+CY+SAG+ E++RDD N+FP EV G  +     D +PDE WLD+ R+D++ PIML RMD+   KGCD IE DN D      G S D   +L+   Q+ YN W+A   HAR + + +KN+ +     V  +D  +NE+C+    C    P++ A K +   EY  +   FC+QAN M    +KK   L + RV C+
Sbjct:   71 SASMISLLKSQGKKVICYMSAGSWENYRDDANVFPEEVLGKYL-----DGWPDERWLDISRIDILGPIMLRRMDLAVEKGCDGIEPDNID------GYSNDSGFALTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLPFVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSCR 269          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A1F5JF22_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_40_11 TaxID=1797762 RepID=A0A1F5JF22_9BACT)

HSP 1 Score: 157 bits (397), Expect = 5.160e-43
Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 2
Query:   35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
            +++V+A L++ GKKV+CY SAG+ E++R D N FP  VKG        + +P E WLD+RRLD++ PIM  R+D+ K KGCD +E DN D   +  G      ++   QI YN W A   HARG+ V +KN+ E     +  YD  +NE+C+    C     ++ A K + N EY      FC QAN M  +++KK  DL   RV C+
Sbjct:   85 SASVVASLKNSGKKVICYYSAGSWENWRPDANQFPDSVKGN------SNGWPGEKWLDIRRLDVLGPIMSARLDLAKQKGCDGVEPDNVDGYTNNTGFP----LTYQDQINYNKWTANAAHARGLSVGLKNDIEQVNDLLSYYDWTLNEQCFQYNECDPLTKFVQAGKAVFNVEYKLDTSQFCPQANSMNFNSLKKNLDLDAYRVACR 282          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A2V8BTK0_9BACT (Endo alpha-1,4 polygalactosaminidase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8BTK0_9BACT)

HSP 1 Score: 155 bits (391), Expect = 2.560e-42
Identity = 82/211 (38.86%), Postives = 121/211 (57.35%), Query Frame = 2
Query:   35 ASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQ--IAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCKS 661
            +S V+A L +KG++ +CY+SAGT E++R D   FPA V GG      G+ +P E WLD+RR+D++ PIM  RMD+ K KG DA+E DN D      G S +   +L+ Q  + YN W+AAQ HARG+ + +KN+ +  +  V  +D  +NE+C+    C    P+  A K +   EY  T   FC +A  ++ + +KK  DL      C S
Sbjct:   64 SSTVVASLHAKGRRAVCYMSAGTWENWRPDAAAFPAAVLGG------GNGWPGEKWLDIRRIDVLGPIMEARMDLCKQKGFDALEPDNID------GYSNNSGFALTAQDQLTYNKWLAAQAHARGLSIGLKNDLDQVSQLVTSFDWAINEQCFEYNECNLLAPFTQAGKAVFEVEYSLTPAQFCDKAVALKFNALKKGLDLDAAVTACPS 262          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A3D4Z2E0_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D4Z2E0_9DELT)

HSP 1 Score: 154 bits (388), Expect = 5.180e-42
Identity = 82/206 (39.81%), Postives = 121/206 (58.74%), Query Frame = 2
Query:   41 AVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
            +VI +L S G+KV+CY SAG+ E++R D N FP+ VKG        + +P E WLD+RRLD++ PIM  R+D+  AKGCD +E DN D   +  G     +++   Q+ YN ++AA+ HARG+ V +KN+ +     V  +D  +NE+C+    C    P+I A K + N EY      FC +AN M  +++KK  DL   RV C+
Sbjct:   58 SVIDELHSAGRKVICYFSAGSWENWRPDANQFPSSVKG------RNNGWPGEKWLDIRRLDILGPIMKARLDLAVAKGCDGVEPDNVDGYSNRSGF----KLTYQDQLHYNKFLAAEAHARGLSVGLKNDVDQVKDLVAFFDWTLNEQCFEYRECDTLLPFIKAGKAVFNVEYKGNTNNFCPKANAMNFNSMKKHLDLDAWRVPCR 253          
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Match: A0A2V9F641_9BACT (Glyco_hydro_114 domain-containing protein (Fragment) n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9F641_9BACT)

HSP 1 Score: 152 bits (383), Expect = 1.110e-41
Identity = 80/206 (38.83%), Postives = 121/206 (58.74%), Query Frame = 2
Query:   41 AVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNADLPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHVDDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLMEMSTIKKVPDLTTCRVDCK 658
            +V+A L ++G+KV+CYISAGT E++R D   FPA VKG  V+      +P E WLD+RRLD++ PIM  R+D+ + KG D +E DN D   +  GL     ++   QI YN ++A Q HARG+ VA+KN+ +     +  +D  +NE+C+    C    P+I A K +   EY  +   FC QAN +  + ++K  +L   R+ C+
Sbjct:   23 SVVASLHAQGRKVICYISAGTFENWRPDAASFPAVVKGNAVS-----GWPGENWLDIRRLDILGPIMTARLDLCQTKGFDGVEPDNIDGYANGTGLP----LTAQDQINYNTFLANQAHARGLSVALKNDLDQVQALLPYFDWALNEQCFQYNECNTLVPFITAGKAVFEVEYSLSTSQFCPQANALNFNAMQKNLNLDAFRIPCR 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1397.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0FN09_9EUKA7.140e-8849.43EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FCU9_9EUKA8.060e-8748.54EGF-like domain-containing protein (Fragment) n=1 ... [more]
A0A0L0FMI3_9EUKA2.950e-8550.18EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FQ33_9EUKA1.210e-8450.55EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FQP7_9EUKA1.160e-5853.66EGF-like domain-containing protein (Fragment) n=1 ... [more]
UPI001969C6AE4.200e-4540.00endo alpha-1,4 polygalactosaminidase n=1 Tax=Desul... [more]
A0A1F5JF22_9BACT5.160e-4339.90Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candi... [more]
A0A2V8BTK0_9BACT2.560e-4238.86Endo alpha-1,4 polygalactosaminidase n=2 Tax=Acido... [more]
A0A3D4Z2E0_9DELT5.180e-4239.81Endo alpha-1,4 polygalactosaminidase n=1 Tax=Delta... [more]
A0A2V9F641_9BACT1.110e-4138.83Glyco_hydro_114 domain-containing protein (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1397contigP-littoralis_Contig1397:167..2415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog72019.SARC_08746T0
PFAMsEGF_2,Glyco_hydro_114
Model size841
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.37e-85
EggNOG OGsCOG3868@1|root,2RCTR@2759|Eukaryota,39XS2@33154|Opisthokonta
DescriptionGlycoside-hydrolase family GH114
Cds size837
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1397.1.2prot_P-littoralis_Contig1397.1.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1397 167..2411 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789644.752359-CDS-P-littoralis_Contig1397:166..3611680789644.752359-CDS-P-littoralis_Contig1397:166..361Pylaiella littoralis U1_48CDSP-littoralis_Contig1397 167..361 -
1680789644.764538-CDS-P-littoralis_Contig1397:774..9061680789644.764538-CDS-P-littoralis_Contig1397:774..906Pylaiella littoralis U1_48CDSP-littoralis_Contig1397 775..906 -
1680789644.7760935-CDS-P-littoralis_Contig1397:1144..13391680789644.7760935-CDS-P-littoralis_Contig1397:1144..1339Pylaiella littoralis U1_48CDSP-littoralis_Contig1397 1145..1339 -
1680789644.7888737-CDS-P-littoralis_Contig1397:1594..17291680789644.7888737-CDS-P-littoralis_Contig1397:1594..1729Pylaiella littoralis U1_48CDSP-littoralis_Contig1397 1595..1729 -
1680789644.7978837-CDS-P-littoralis_Contig1397:2231..24111680789644.7978837-CDS-P-littoralis_Contig1397:2231..2411Pylaiella littoralis U1_48CDSP-littoralis_Contig1397 2232..2411 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789644.8064883-UTR-P-littoralis_Contig1397:2411..24151680789644.8064883-UTR-P-littoralis_Contig1397:2411..2415Pylaiella littoralis U1_48UTRP-littoralis_Contig1397 2412..2415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1397.1.2

>prot_P-littoralis_Contig1397.1.2 ID=prot_P-littoralis_Contig1397.1.2|Name=mRNA_P-littoralis_Contig1397.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=279bp
MWNCTISTTPASAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKG
GIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDILKAKGCDAIEWDNAD
LPVHTLGLSGDGRISLSVQIAYNAWIAAQTHARGMGVAMKNNNETAAFHV
DDYDMVVNEECWINGNCVNYWPWIMASKLILNTEYFTTRCMFCTQANLME
MSTIKKVPDLTTCRVDCKSGFDSTQCSDASISGVVSYPIDWTVGTGAVMS
EDWCPMTVNTDADECPSDRFATCDLFVG*
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mRNA from alignment at P-littoralis_Contig1397:167..2415-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1397.1.2 ID=mRNA_P-littoralis_Contig1397.1.2|Name=mRNA_P-littoralis_Contig1397.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2249bp|location=Sequence derived from alignment at P-littoralis_Contig1397:167..2415- (Pylaiella littoralis U1_48)
CACGATGTGGAACTGTACGATATCGACTACTCCTGCTTCGGCTGTCATCG CCGATCTGCAGAGCAAAGGGAAGAAGGTCATGTGCTACATTTCCGCCGGC ACGTCCGAAGACTTCCGCGACGATATCAACCTTTTCCCAGCAGAGGTCAA GGGTGGCATCGTGACGTTTGGTGAAGGCGATACTGTGAGTGCCGTATGAG GCGTTTGATCCTTGGACAAAGTAAATGCAGTAGAGTCGAGACTTCGTCAA GTTAGGAAGTCAGCCCGAAGGTCGTGCAGTTGCGGCAAGTCATGAACTTA CGTAGGGTGTGCCCGCAGGAGATGCATACACGTTTGACTTCGCAATCGTC AATACACTTCTCCCCGATTTCCAATCCTTCACGTCGTCTGAATTTTTCCT ACTGGAGCCCAAGACGCAGCAGATTTGGCGGCTGACGCATTTACAGTTTT TCATCAAATTTGAAGCCAATAGGGTCCGAGATTTGAAGTGACAGTTTCTA GAGGAACGTTCGAAAGGGGAAACGGCAAGAGTTAGACCTCGTTCCGTGTA AGCACACTTTTATAATTCTCACAAGCAAAAATCATTACGTGGTCCGAGTT TCCCTCATACGTACAGGCTCCCCTTTATCTTACTTGAACCCACGACCTTT TCTCGTGTGTGCAATTCCCTCTTTCGCCCCTCTCAGTTCCCCGACGAGGC TTGGCTGGACCTGCGTCGACTAGACCTGGTGGCTCCGATCATGTTGGAGA GGATGGACATTCTGAAGGCCAAGGGTTGCGATGCCATAGAGTGGGACAAC GCCGATCTTCCCGTTCACACCGTAAGTTTGACCGATCCGTTGGCACCATC GTTTTACGGCATGCGAAGGGATGAAAGGGCAGCACGCACAGTGAAAGATA CAATTGGTGCTGATAAAAGGCTCTAGAACGCAGCTACAGTATTTGTAGCA AGGTTAGAGCCCAAGGCCCGACAAGTGCAGGTCGGGAGAGCACAATCACT TGTCAATACGAATCTCACCTGATTTCGCCTCCTGCCCCCACCGTTCCCTC TAATGGATGTATTGTCTCGCCGGCAGTTGGGGCTAAGCGGAGATGGCCGG ATCAGCTTGAGTGTTCAGATAGCTTACAACGCCTGGATAGCGGCGCAGAC ACACGCCCGCGGCATGGGGGTGGCCATGAAGAACAACAACGAGACTGCGG CATTCCATGTGGACGATTACGACATGGTGGTCAACGAAGAGTGCTGGATC AACGGAAACTGCGTCAACTACGTACGTCACCAAGCTTATAGAATTTCTGT GGTCATACCTCTCGGCCGTTTCGTAACGGTGGGATAGAAGTGTGTAACGC GATCGCCACCAGCGAATTATCAAGTTTAACCTCCCTGCCTCCTGGCATCA AGCGTCGTGATTCCTATTCTCGTACATAGGAACAGGGTGCCATCATGACG CGCTTTCTTGTCACGGATCCTCTAACCTCGACGCCACTGTTGTGCATGCC TTACTTCAGTGGCCGTGGATCATGGCCAGCAAGCTGATTCTCAACACCGA GTACTTTACTACCAGATGCATGTTCTGCACTCAGGCCAACCTCATGGAAA TGTCGACCATCAAGAAGGTTCCCGACCTCACCACTTGCAGGGTGAGCCTC TCAGTCTTTAGTGCAGTCGCAGGAAGTTGGTCTGCGTGTGACGTTGTACA TGTCGTTACACCGATAAGCTCACAGATGCTCAAGCAAGCCACCAAGTTTC GGTGAGAGTGCCGGTAGCACCATCCCACACGCCGTCCTGCGGCGCATGAT GAAGCGCATCAGCCTCCATCACCATATCTTGCGAACGGGCTCCTGTACTC ACCACGGCTGGTAGCGAAGAGGTCGCAAGTATTGAAGGCCCTCCTCAAAG GCACCATCGCCCCTGAATATTTGTGGCGGGGCTCATGGGCCGTCCGTCCC GACGCTCTGACCGTCAGCTCATGAGCTTCCGCAACGTCCAGTCGTACCGT AAGGGTGTCAAAACCGTTCTCCCTTGACTCTTCTCTCATCCAATTATCTC CCAGGTGGACTGTAAGTCAGGTTTCGACAGCACCCAGTGCAGCGACGCCT CGATCAGTGGTGTCGTGTCCTACCCGATCGACTGGACGGTCGGTACTGGC GCTGTCATGAGTGAGGACTGGTGCCCCATGACCGTCAACACTGATGCCGA CGAGTGCCCAAGCGACAGATTTGCCACGTGCGATCTGTTCGTGGGTTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1397:167..2415-

>mRNA_P-littoralis_Contig1397.1.2 ID=mRNA_P-littoralis_Contig1397.1.2|Name=mRNA_P-littoralis_Contig1397.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=837bp|location=Sequence derived from alignment at P-littoralis_Contig1397:167..2415- (Pylaiella littoralis U1_48)
ATGTGGAACTGTACGATATCGACTACTCCTGCTTCGGCTGTCATCGCCGA
TCTGCAGAGCAAAGGGAAGAAGGTCATGTGCTACATTTCCGCCGGCACGT
CCGAAGACTTCCGCGACGATATCAACCTTTTCCCAGCAGAGGTCAAGGGT
GGCATCGTGACGTTTGGTGAAGGCGATACTTTCCCCGACGAGGCTTGGCT
GGACCTGCGTCGACTAGACCTGGTGGCTCCGATCATGTTGGAGAGGATGG
ACATTCTGAAGGCCAAGGGTTGCGATGCCATAGAGTGGGACAACGCCGAT
CTTCCCGTTCACACCTTGGGGCTAAGCGGAGATGGCCGGATCAGCTTGAG
TGTTCAGATAGCTTACAACGCCTGGATAGCGGCGCAGACACACGCCCGCG
GCATGGGGGTGGCCATGAAGAACAACAACGAGACTGCGGCATTCCATGTG
GACGATTACGACATGGTGGTCAACGAAGAGTGCTGGATCAACGGAAACTG
CGTCAACTACTGGCCGTGGATCATGGCCAGCAAGCTGATTCTCAACACCG
AGTACTTTACTACCAGATGCATGTTCTGCACTCAGGCCAACCTCATGGAA
ATGTCGACCATCAAGAAGGTTCCCGACCTCACCACTTGCAGGGTGGACTG
TAAGTCAGGTTTCGACAGCACCCAGTGCAGCGACGCCTCGATCAGTGGTG
TCGTGTCCTACCCGATCGACTGGACGGTCGGTACTGGCGCTGTCATGAGT
GAGGACTGGTGCCCCATGACCGTCAACACTGATGCCGACGAGTGCCCAAG
CGACAGATTTGCCACGTGCGATCTGTTCGTGGGTTGA
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