mRNA_P-littoralis_Contig139.121.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig139.121.1
Unique NamemRNA_P-littoralis_Contig139.121.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE)

HSP 1 Score: 702 bits (1812), Expect = 6.620e-233
Identity = 362/537 (67.41%), Postives = 420/537 (78.21%), Query Frame = 3
Query: 2391 MIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMN-GSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFIHAAN--DTSP-SSLPPSLILHRLLYLLHHPQPV---------------------------WTVQHEVGDGACGFRAIARHFLGDPELH 3908
            MIDAPAGTGKT+TEKC+A+RLRGEDK VLIVASTGIAALQLPGGWTAHSMFKLPMDD LT SCVCNI +QTQRAELIR+S+LIIWDELPMTHRYCVEAL+RTL+DLM   + FGGKT+LFSGDWRQTGPIVKN + TDTVDAAFISSPLWK V R +L KSQRD+ DPQYA+FVR++GEGS+PT+TM+ GS +  L+NHD+ D  NHFQL+YTT+FD+L+ FVYPD+++ S  WN RAILATTN++IDRSN  +SD RPG+  SFFSSDSLI DE    TAFASPEHLNQLNVQG+PPHEL +K+D LA+ITRNLNFSEGLVNGQKCV+ AVS +SRV+QV+LLT+E PRPIVLIPRI F  KVGRNGI F R QFPLRTAYSMTINKSQGQTL KIGLDLRS  F+HGQLYVALSR+  R S+MCLLP  HI++G PYT+N+VYPP I AA   D  P +S+  S+   +        +                             WTV  E+GDGAC  R ++R+  G P  H
Sbjct:    1 MIDAPAGTGKTFTEKCLASRLRGEDKVVLIVASTGIAALQLPGGWTAHSMFKLPMDDNLTPSCVCNISSQTQRAELIRQSNLIIWDELPMTHRYCVEALDRTLKDLMAVDQPFGGKTILFSGDWRQTGPIVKNAAPTDTVDAAFISSPLWKGVMRFRLNKSQRDKEDPQYASFVRSIGEGSRPTVTMSDGSKLTPLNNHDNEDTANHFQLRYTTDFDELLRFVYPDLSQQSRIWNTRAILATTNHSIDRSNDTISDNRPGNYVSFFSSDSLISDEKNRRTAFASPEHLNQLNVQGIPPHELKLKTDTLALITRNLNFSEGLVNGQKCVVLAVSASSRVLQVQLLTEERPRPIVLIPRINFQGKVGRNGICFTRKQFPLRTAYSMTINKSQGQTLSKIGLDLRSSPFAHGQLYVALSRSQNRTSIMCLLPDTHIIDGIPYTDNIVYPPLIQAATFGDYHPGNSISGSVGGDKDTQSCDGDEESVDDADKDDXXXXXXXXXXXANADSLGSWTVLDEIGDGACMLRCVSRYIYGSPITH 537          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE)

HSP 1 Score: 621 bits (1602), Expect = 9.700e-198
Identity = 354/708 (50.00%), Postives = 450/708 (63.56%), Query Frame = 3
Query: 1746 YLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAV---------------GEGSQPTITMN-GSDMIAL-------HNHDDPDHNNHFQLQYTTEFDDLIDFVYPDV-TEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHI---LEGTPYTENVVYPPFIHAANDTSPSS--LPPSLI 3782
            + D ++  V+ R  D HV R+S  +P  GD+F+LRLLLH  P+RS+ +LRT     +D  ++ TF DAARA G+I  D+EY +C++EA  F+   QLR LFVTLILDGAPA  LW +F     +D    +S  DA   ALR IDL L+ HG++NE V L AVVH  TE+ R +  FDP   +A+ D H  +LT EQ+ VY TV+ +V        MIDAPAGTGKTYTE  + ARLR   K VL VASTGIA LQLPGGWTAHSMFKLP++D   S  +CNI  ++QRAE++RK DLI+WDE+PM+HR+ VEALN TLQDLM N  I GGKTVL SGD RQ GP +K+G    T+DA+ ISSPLW  V+RM+LT SQR R +   AA+VR                 G G+Q   T N G D + L          D P   + F +  T  F++LIDFVY D+ T D + +  RAIL++TN  ID  N  V D  PG   + +S D++  D   ++  F +   LN ++V GVPPH L +K + + MITRNLNF +GLVNGQK ++   S  +R++ VELL   +   +VLIPRI   AKVGRNGI F R+Q PLR  Y++TINKSQGQTL KIGLDLRS  F+HGQLYVALSRA  R S+MCL  P  +   L  T +  N+ +P F++AA DT   S  LPP  I
Sbjct:  106 FRDKFRIYVTPRSSDKHVARVSVMSPDKGDVFFLRLLLHHKPARSFEQLRT-----HDDTVYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTEDLRINMSDRDANNTALRQIDLGLQHHGRTNEVVGLTAVVHLDTEYMRFKHMFDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEDKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPFIKHGGPAGTIDASLISSPLWPHVQRMRLTISQRHRKN---AAYVRCFCSKCRYVGMSVCXXXGIGTQAHTTANDGIDAVPLAYRLFMKFRTDSP--KDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSSTNATIDLINSHVLDILPGDMLTAYSCDTV--DPHDNNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSS--LVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTHGQLYVALSRAQKRSSIMCLTLPARLRGSLNRTAFVANITFPAFVNAATDTITDSPPLPPQYI 797          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE)

HSP 1 Score: 554 bits (1427), Expect = 2.670e-172
Identity = 312/657 (47.49%), Postives = 396/657 (60.27%), Query Frame = 3
Query: 1629 KRPENDCFSQLTILDYYEQYTVTTPKKTDAPLDFAPLGKYLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQ-DLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRS 3596
            +RP +  F  LT LDY EQY V   K             + D ++N V+ R  D HV R+S  +P  GD+FYLRLLLH  P+RS+ +LRT     +D  ++ TF DAARA G+I  D+EY +C++EA  F+   QLR LFVTLILDGAPA  LW +F     +D    +S  DA   ALR IDL L+ HG++NE V LPAV+H  TE+ R +  FDP   +A+ D H  +LT EQ+ VY TV+ +V        MIDAPAGTGKTYTE  + ARLR   K VL VASTGIA LQLPGGWTAHSMFKLP+++   S  +CNI  ++QRAE++RK DLI+WDE+PM+HR+ VEALN TLQ DL+ N  I GGKTVL SGD RQ GP+VK+G   +T+DA+ ISSPLW  V+RM+LT SQRDR D  YA+                                                                AIL++TN  ID  N  V D  PG   + +S D++  D   ++  F +   LN ++V GVPPH L +K + + MITRNLNF +GLVNGQK ++   S  +R++ VELL   +   +VLIPRI   AKVGRNGI F R+Q PLR  Y++TINKSQGQT+ KIGLDLRS
Sbjct:  237 RRPSDQTFYSLTYLDYNEQYIVKKDKARQGTF-------FRDKFRNYVTPRSSDKHVARVSAMSPDKGDVFYLRLLLHHKPARSFEQLRT-----HDDTVYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTEDLRINMSDRDANNTALRQIDLVLQHHGRTNEVVGLPAVIHLDTEYIRFKHMFDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEEKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQADLLGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRDREDAAYAS----------------------------------------------------------------AILSSTNATIDLINSHVLDILPGDMLTAYSCDTV--DPHDNNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSS--LVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTVPKIGLDLRS 811          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 2.780e-161
Identity = 271/448 (60.49%), Postives = 330/448 (73.66%), Query Frame = 3
Query: 2259 MRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGS-ATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMN-GSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETT--SHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDL 3590
            M  AFDP+  TAYAD  EP LT  Q+ VY  V+ AVR+   QP MIDAPAGTGK++TEK IAARLR     VLIVASTGIAALQLPGGWTAHSMFKLP+++ L     C+IK+++QRAELIRK   II+DELPMTHR C+E L RTL+D+ +++ ++GG T+ FSGDWRQ GP+    + A  TV+A+FISS LW   KRM+LT SQRD  DP YA+FVR++GE   PT T + G+  + L N  D    +HF LQYTT+F+DLI+FVYPD+ ED+   N+RAILATTN +ID  N A+S +R G + +F SSD LI+D     S TAF S EHLN ++  GVPPH+L IKSD LAM+ RNL FSEGLVNGQK V+  VSPNSRV++VEL +D +   IVLI R  F A+VGRNGI F RVQFPLR AYS+TIN SQGQTL +IGLDL
Sbjct:    1 MIAAFDPSAQTAYADRFEPGLTSGQRVVYNAVVDAVRNNQPQPFMIDAPAGTGKSHTEKVIAARLREGFTAVLIVASTGIAALQLPGGWTAHSMFKLPLNEKLVDGAFCDIKSESQRAELIRKRTFIIFDELPMTHRCCIETLERTLRDIRRSEALYGGITICFSGDWRQCGPVAPFATPAETTVEASFISSDLWPKTKRMRLTMSQRDEEDPAYASFVRSIGEKIHPTTTFSDGAKRVPLSNTHDTSTTDHFSLQYTTDFNDLINFVYPDIHEDARHLNDRAILATTNISIDSCNDAISSRRHGDNVTFHSSDRLIKDHNNPASSTAFRSTEHLNNIDTPGVPPHQLQIKSDALAMLIRNLIFSEGLVNGQKVVIRGVSPNSRVVRVELSSDHS---IVLILRTSFHAQVGRNGITFNRVQFPLRIAYSLTINNSQGQTLSRIGLDL 445          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 4.200e-143
Identity = 243/420 (57.86%), Postives = 285/420 (67.86%), Query Frame = 3
Query: 2553 MDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFIHAA----NDTSPSSLPPSLILHRLLY 3800
            MDD +T SCVCNI  QTQRA L+R SDLIIWDELPMTHRYCVEAL+RTL+DLM+N ++FGGKT+LFSGDWRQTGPIVK+GS TDTVDAA ISS  WK + R++LTKSQRD+ DP YA+FVR VGE   PT                                                                                  SDSLI+DE+++ TAFA+PEHLNQL+V G+PPHEL +KS+GLAM+ RNLNF+EGLVNGQKC+L  VSPNSRVIQVELLTD+ P PIVLIPRI FTA+VGRNGI+FMRVQFPLR+AY+MTINKSQGQTLKKIGLDLRS  F+HGQLYVAL+RA  R +VM LLP   +++G PYTENVVY PF  AA    N+ +P S  P L  H +++
Sbjct:    1 MDDKMTPSCVCNISAQTQRAALLRSSDLIIWDELPMTHRYCVEALDRTLKDLMRNDRLFGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKHISRLRLTKSQRDKDDPAYASFVRNVGEDKLPT----------------------------------------------------------------------------------SDSLIKDESSTSTAFAAPEHLNQLHVSGIPPHELQLKSNGLAMLVRNLNFAEGLVNGQKCILKGVSPNSRVIQVELLTDDLPHPIVLIPRINFTAQVGRNGISFMRVQFPLRSAYAMTINKSQGQTLKKIGLDLRSSPFAHGQLYVALTRAQKRSTVMVLLPHSQVVDGVPYTENVVYAPFTEAATGETNNLNPHSGTP-LTYHEMVF 337          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 2.470e-125
Identity = 239/473 (50.53%), Postives = 299/473 (63.21%), Query Frame = 3
Query: 2391 MIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIAL-HNHDDPDH-NNHFQLQYTTEFDDLIDFVYPDV-TEDSSKWNNRAI-LATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHI---LEGTPYTENVVYPPFIHAANDTSPSS--LPPSLI 3782
            MIDAPAGTGKTYTE  + ARLR   K VL VASTGIA LQLPGGWTAHSMFKLP+++   S  +CNI  ++QRAE++RK DLI+WDE+PM+HR+ VEALN TLQDLM N  I GGKTVL SGD RQ GP+VK+G   +T+DA+ ISSPLW  V+RM+LT SQR ++                 T T +G D + L + H+ PD   + F +  T  F++LIDFVY D+ T D + +  RAI L   +N +D                                 F +   LN ++V GVPPH L +K + + MITRNLNF +GLVNGQK ++   S  +R++ VELL   +   +VLIPRI   AKVGRNGI F R+Q PLR  Y++TINKSQGQTL KIGLDLRS  F+HGQLYVALSRA  R S+MCL  P  +   L  T +  N+ +P F++AA DT   S  LPP  I
Sbjct:    1 MIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEEKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRTQAH----------------TTTDDGIDAVPLAYIHEVPDSPKDQFFIDNTDSFEELIDFVYQDILTADPTDFKARAICLDPHDNNLD---------------------------------FVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSS--LVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTHGQLYVALSRAQKRSSIMCLTLPARLRGSLNRTAFVANITFPAFVNAATDTITDSPPLPPQYI 420          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E)

HSP 1 Score: 441 bits (1134), Expect = 4.600e-125
Identity = 292/759 (38.47%), Postives = 415/759 (54.68%), Query Frame = 3
Query: 1470 LACRQAKAPTKSPAINTIHNHSEPLQQSVKNREEQSINE*TTVTTQPHLLKYFKRPENDCFSQLTILDYYEQYTV-TTPKKTDAPLDFAPLGKYLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD-ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIM-IDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYP-DVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLI----RDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRP-IVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVV 3719
            ++CR+       P +  +H H E  Q +V  +  Q +       ++ +L  Y  RP+    + LT L+++EQ+ V TT K+ + P        + DG ++ + KR++   V R+ + +P +G+LF+LR+LL + P RSY +LRTV     D VI++TF +AA ARGL+    E+   ++EASAF     LR LF  +I+ GAPA  LW +FKD L +D++        A   AL DID  L+ HG+    + LP V    TE  R    +D       A    P LT EQ  V   ++ AV   +   +  ID P+GTGKT     I ARLR E   VL  ASTGIAAL   GG TAHSMF+LP++        C +   +QRAELIR++ LIIWDE PM H+  VE L+R L+D+ +N++ FGGK ++ +GD+RQ  PI+ +G+  D ++A+  SS LW ++ + +L    R R D  Y  FV  VGE   P+I++     I L             +   T  +DL++FVYP DV  +  +   RAIL+ TN  I   N AV    P       S+DS       D    HT     + LN ++  GVP H L +K   + ++ RN++F++GLVNG K  +  +S   R ++  +      RP  VLIPRI F  +V  +GI  +R QFPL+ AY MTINK+QGQTL K+GLDLRS  FSHGQLYVAL R      +  L+P + IL+  P+T N+V
Sbjct:  822 ISCRE-------PTVINLHIHLEQ-QDNVIFQPGQEME--ALQRSKSNLWLYLNRPDTPELTSLTYLEFFEQFIVETTEKRGNEP--------FADG-RHFLKKRQRGKCVARLRWLSPTLGELFFLRMLLIKFPCRSYEDLRTV-----DGVIYATFQEAAMARGLLDEQSEFDHALQEASAFKTGRGLRQLFFAVIMFGAPAAILWEKFKDCLSEDYMGNEDNARIAHRRALCDIDHMLRPHGRCLRDMGLPEVEDVSTELGREVTRWDAEDAARSALEWRPKLTEEQLSVSDAIINAVTGEDENKVFFIDGPSGTGKTVVLNYITARLRSEGAVVLCTASTGIAALNHLGGITAHSMFQLPLETN-DPHATCGVTGGSQRAELIRRASLIIWDEAPMAHKVTVEILDRCLRDICQNRQAFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLWPNIIKKRLRTILRSREDQDYTDFVLEVGENKVPSISIGIYRPIPLR-----------MIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHT-----DVLNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFVEKIS--RRFVEARV----PGRPDTVLIPRICFKFQVSNSGIEMIRRQFPLKVAYGMTINKAQGQTLDKVGLDLRSDVFSHGQLYVALGRVRRAADIRVLVPEDRILDECPHTANIV 1533          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51)

HSP 1 Score: 419 bits (1076), Expect = 1.070e-120
Identity = 268/719 (37.27%), Postives = 397/719 (55.22%), Query Frame = 3
Query: 1614 LLKYFKRPENDCFSQLTILDYYEQYTVTTPKKTDAPLDFAPLGKYLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDATMA---ALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAV-----RDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNG-SATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQP--TITMNGS--DMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVT-EDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNG-INFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYP 3725
            L+ YFKRP  + F  LT LD+YE+Y V + + T   ++   L          +++R++ + V R+ +  P  G+LFYLRLLL   P RSY +L  +      P+   TF +AA+A G+   + EY + M+EAS F    +LR+ FV L ++G     LW +++  +  DFL+ LS  DA  A    L  ID   + HG S  +  LP V+   TE  R R+ ++      +     P L+P+Q  V+  +   +     R++N   I ID PAGTGKT     I A  RG    VL  AS+GIAA    GG TAHSMFK P++  +      +I   +QRAEL+R++D+II+DE PM H+Y +  L+R+L+DLM   KIFGGK V+F+GD+RQ  P+V    S +D ++ +  SSP+W+ +K   L+ SQR+R DP+Y+ F+  +G    P  T+ +N S  +++ L +H          L Y T+ +DLIDFV+  V   +      RAIL T N  +   N  V D+       F+S D ++ + T     F   + LN+L  +GVP H+L +K   + MI RNL+FS+ LVNG K ++   +P   +++    T+E      LIPRI F A +  +  I   R QFPL   Y+MT++KSQGQT+ ++G+DLRS  FSHGQLYVAL R   +  +  L+  + +++      NVVYP
Sbjct:  388 LITYFKRPLGEQFDNLTYLDFYERYIVHSRRPTTRNVEIFELSN-----NKFLTRRQRGELVSRLFWVAPNRGELFYLRLLLASQPCRSYDDLYKL----GGPLC-KTFQEAAKALGIADDEAEYEIAMQEASTFLTGPRLRSFFVLLAVNGVRVVSLWDKYRHLISQDFLQRLSD-DAEKAYKLCLIQIDRLFRRHGTSLVEQGLPGVIDDSTEVGRERVEYNRDELNTFVSSWLPKLSPDQNLVFNYIHTLLSDSEFRNSNNTAIFIDGPAGTGKTLLLNVITAHARGNSGIVLCTASSGIAAQNYVGGITAHSMFKFPLNP-VDDLGYWSITNGSQRAELVRQADVIIYDEAPMAHKYLIHLLDRSLRDLMNCNKIFGGKIVIFAGDFRQIPPVVVRAKSNSDIINCSVKSSPIWEQIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSH----------LSYVTDLNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSENTDE--IFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTPRIIIVRKPGETNE-----FLIPRILFKAPIEPDSPIEMTRRQFPLALCYAMTVHKSQGQTINRVGVDLRSDVFSHGQLYVALGRVQEKSDIKILVSRDKLIDNKLLLNNVVYP 1077          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66)

HSP 1 Score: 405 bits (1041), Expect = 1.170e-114
Identity = 265/727 (36.45%), Postives = 395/727 (54.33%), Query Frame = 3
Query: 1602 TQPHLLKYFKRPENDCFSQLTILDYYEQYTV--TTPKKTDAPLDFAPLGKYLDGYKN-IVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD----ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAV-----RDANGQPIMIDAPAGTGKTYTEKCIAARLRGE-DKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSA-TDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVT-EDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNG-INFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFI 3734
            T   L+ YF RP    F  LT  D+YE+Y +  T P+  +  +        L+   N  V++R++ + V R+ F  P  G+ FYLRLLL   P RSY   R + N+     +  TF +AA+  GL   + EY   M EA AF    +LR  FV L ++G P   LW +F++ + +DF+     PD    A  + L  ID  L+ HG    +  LP V    TE  R +  ++      + +   P L+PEQ +++  V + V     R+++   I ID P GTGKT     I A +RG  +  VL  AS+GIAA     G TAHSMF+ P++  +      NI   +QRAELI  ++LII+DE PM H++ +  L R+L+DL K  KIFGGK ++F+GD+RQ  P+V +    +D  +A+  SSP+W+ +K   L  SQR R D +++ F+  +G     ++T++ +  +        +  N   + + ++ DDLIDFVYP+V   +     +RAIL+T N ++   N  + +  P     F+S D ++ D       F   + LN++  +G+P H+L +K   + M+ RNLNFS+ LVNG K ++   SP    ++   L+D+      LIPRI F A V     I   R QFPL+  Y+MTI+KSQGQT+ ++G+DLRS  FSHGQLYVALSRA  R ++  L+  E ++ G P   NVVYPP +
Sbjct:  547 TTSDLITYFNRPAGLNFDNLTYQDFYEKYIIHATRPRTKNVEI--------LETSNNRFVTRRQRGELVARLFFVAPNRGEQFYLRLLLASYPCRSY---RDLLNLGGPDCM--TFQEAAKTVGLANDEAEYEKAMTEACAFFTGPRLRNFFVLLAVNGIPVASLWSKFRNQISEDFIHR--QPDDIDRAYHSCLVIIDRLLRRHGTCLIEQGLPDVADETTELGREQTEYNRNVLKNFVNDWLPKLSPEQNEIFEYVNKLVTNQNFRESHNSAIFIDGPGGTGKTLLLNVITAHVRGNLNGIVLCTASSGIAAQNHENGTTAHSMFRFPLN-LVDDLGYWNITNGSQRAELILNANLIIFDEAPMAHKWLIHLLERSLRDLTKIDKIFGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQKLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-------NLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQ--IFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDD-----YLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILVNEERVINGNPLANNVVYPPLL 1243          
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI001568188F (uncharacterized protein LOC117996074 n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568188F)

HSP 1 Score: 412 bits (1060), Expect = 2.560e-114
Identity = 270/727 (37.14%), Postives = 396/727 (54.47%), Query Frame = 3
Query: 1602 TQPHLLKYFKRPENDCFSQLTILDYYEQYTV--TTPKKTDAPLDFAPLGKYLDGYKN-IVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD----ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVL-----QAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGE-DKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNG-SATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVT-EDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNG-INFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFI 3734
            T   L+ YF RP    F +LT  D+YE+Y V  T P+  +  +        L+   N  V++R++ + V R+ F  P  G+ FYLRLLL   P RSY   R + N+     +  TF +AA+  GL   + EY   M EA AF    +LR  FV L ++G P   LW +F+D + +DF+     PD    A  + L  ID  L+ HG    +  LP V    TE  R +  ++  T   + +   P L+PEQ +++  V      Q+ R      I ID P GTGKT     I A +RG  +  VL  AS+GIAA     G TAHSMF+ P++  +      NI   +QRAELI  +++II+DE PM H++ +  L R+L+DLMKN KIFGGK ++F+GD+RQ  P+V +  S +D  +A+  SSP+W+ +K   L  SQR R D +++ F+  +G     ++T++ +  +        +  N   + +  E DDLIDFVYP+V   +     +RAIL+T N ++   N  + +  P     F+S D ++ D       F   + LN+++ +G+P H+L +K   + MI RNLNFS+ LVNG K ++   SP    ++   L+D+      LIPRI F A +     I   R QFPL+  Y+MTI+KSQGQT+ ++G+DLRS  FSHGQLYVALSR   R ++  L+  E ++ G P   NVVYPP +
Sbjct: 1106 TTSDLITYFNRPAGINFDELTYQDFYEKYIVHATRPRTKNVEI--------LETTNNRFVTQRQRGELVARLFFVAPNRGEQFYLRLLLASHPCRSY---RDLLNLGGPDCM--TFQEAAKTIGLANDEAEYEKAMTEACAFFTGPRLRNFFVLLAVNGIPVASLWTKFRDQISEDFIHR--QPDNIDRAYHSCLVAIDRLLRKHGTCLIEQGLPDVSDNTTELGREQTEYNRNTLRDFVNDWLPKLSPEQNEIFEFVNKLVTNQSFRGTQNSAIFIDGPGGTGKTLILNVITAHVRGNLNGIVLCTASSGIAAQNHENGTTAHSMFRFPLN-LVDDLEYWNITNGSQRAELIFNANVIIFDEAPMAHKWLIHLLERSLRDLMKNDKIFGGKIIIFAGDYRQIPPVVVHARSNSDVFNASVKSSPIWQKLKTFSLITSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-------NLINLSIISFVLELDDLIDFVYPNVVLNEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQ--IFLGVDALNRMHPKGIPEHDLTLKVGCVCMIMRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDD-----YLIPRIIFKAPIETGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRVQHRQNIKILVNKERVINGNPLANNVVYPPLL 1802          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9C5_9PHAE6.620e-23367.41ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JZJ6_9PHAE9.700e-19850.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L0I5_9PHAE2.670e-17247.49ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JVN5_9PHAE2.780e-16160.49ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L0V2_9PHAE4.200e-14357.86ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JNR7_9PHAE2.470e-12550.53ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI001ED8867E4.600e-12538.47uncharacterized protein LOC124173554 n=1 Tax=Ischn... [more]
UPI00103A3A511.070e-12037.27uncharacterized protein LOC114364057 n=1 Tax=Ostri... [more]
UPI001E688A661.170e-11436.45uncharacterized protein LOC123868181 n=2 Tax=Manio... [more]
UPI001568188F2.560e-11437.14uncharacterized protein LOC117996074 n=2 Tax=Aphan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:474998..481021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4558.Sb09g008040.1
PFAMsHelitron_like_N,PIF1
Model size5345
Max annot lvl35493|Streptophyta
KEGG koko:K15255
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.28e-90
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,37I5H@33090|Viridiplantae,3GC0A@35493|Streptophyta,3M3GK@4447|Liliopsida,3IKSP@38820|Poales
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-12_006650.1
EC3.6.4.12
DescriptionBelongs to the helicase family
Cds size2265
COG categoryD
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789643.7769048-UTR-P-littoralis_Contig139:474997..4754561680789643.7769048-UTR-P-littoralis_Contig139:474997..475456Pylaiella littoralis U1_48UTRP-littoralis_Contig139 474998..475456 -
1680789643.7920265-UTR-P-littoralis_Contig139:475737..4763611680789643.7920265-UTR-P-littoralis_Contig139:475737..476361Pylaiella littoralis U1_48UTRP-littoralis_Contig139 475738..476361 -
1680789643.8088098-UTR-P-littoralis_Contig139:478626..4790131680789643.8088098-UTR-P-littoralis_Contig139:478626..479013Pylaiella littoralis U1_48UTRP-littoralis_Contig139 478627..479013 -
1680789643.8177006-UTR-P-littoralis_Contig139:479411..4810211680789643.8177006-UTR-P-littoralis_Contig139:479411..481021Pylaiella littoralis U1_48UTRP-littoralis_Contig139 479412..481021 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789643.8006697-CDS-P-littoralis_Contig139:476361..4786261680789643.8006697-CDS-P-littoralis_Contig139:476361..478626Pylaiella littoralis U1_48CDSP-littoralis_Contig139 476362..478626 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.121.1prot_P-littoralis_Contig139.121.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig139 476362..478626 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig139.121.1

>prot_P-littoralis_Contig139.121.1 ID=prot_P-littoralis_Contig139.121.1|Name=mRNA_P-littoralis_Contig139.121.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=755bp
MEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD
ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAY
ADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAA
RLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKT
QTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVL
FSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQ
YAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLI
DFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDS
LIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEG
LVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGIN
FMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPT
RLSVMCLLPPEHILEGTPYTENVVYPPFIHAANDTSPSSLPPSLILHRLL
YLLHHPQPVWTVQHEVGDGACGFRAIARHFLGDPELHLQARHQIVLYLAH
NSQDVNLHIHDGINTELLYCSDSPPSTYSSYGDYLSRMSMPTTYMGQPEI
TAAIAVYGTPFIPHFQSSTLPHPAIANLNELHLRFTPASRHYDTFTLSNP
AAQS*
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mRNA from alignment at P-littoralis_Contig139:474998..481021-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig139.121.1 ID=mRNA_P-littoralis_Contig139.121.1|Name=mRNA_P-littoralis_Contig139.121.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6024bp|location=Sequence derived from alignment at P-littoralis_Contig139:474998..481021- (Pylaiella littoralis U1_48)
TATGTGGAAGGAAGAACGTTATTCACAATATAACTGTTGCAACAGAGGTA AATTTTCAATCAATCCGCTAAAACCTATCCCCGAAAACTTGCAGCCTGTG TTTCAGAGCGCGCGCTTTAGCAATGCACAAAGAAGCTACAATGGACTTTT CTCTTTTACTGCTTTAGGAGCTGGTGGTATGGAAAAACGAACGTGGACCC AACCACATGGGCCCTCGATGTTGACCCTTCACGGCAAGGCATACCACAGA ATATTTGACCTACAAGAGAAATACGAAGACTACACCGTAGATAACAGCGC CAGATTTTACATCTACGATTCGGAGTTTGCTGATCACGCATCGTCTTTGA AGCTGGATATGAGGATTGCAACTACGCTAAGGTCGCACGTACACACAAAA ATTAGATGGGCTCAACAGTATAAATCAGCCGTTGATGATATCATCAATTC TACGAACCACAGCAGTGACCCTACACCTTTCATAGAGTTCGGCGAAGCAA GCAGAGATATCGATGGACCTGTTCTTGGAGAAAACCCCTCAGCGCCCGAA ATAGCTGCTCTGGTGTATACATCAAGTCAGCAAAACCATGGACCACGCAC AGTAGACATCTACCCTAAAAGCAGCCCCGACAATGTGCCACGGTTTTTGC CACTTTGGAGTTCAACCTATGAAACATTACAATTTCCATTACTCTTCTTA CATGGTGAAGCAGGTTGGAGTAAAGGCCACCACAAGGAAACCCCCCCCTT CAAGTCGAAAACCATGAATCGCAACAATACACATCACGTGCCCTTTCCTT TTTACTGCCGTCAGCGCATGCTTTCAGAACCTATATTTCACAGAAACAGC CGCATAGCTCAAGAGTGGGTTTGTGATTCTCTAAGTAGAATGGAAGAAGA ACGACTGTCCTTTGTAGAATTTGGTCCTCTTCAACAAAGACTAGCGTCTG ACAGAGCTATCAGAGACTCTCAACCCAGTGAACAACCAGGTAAACTGCTT CCAGCTACCCACCCTGGATCACCCGCCAAGCGTAAGTGCGACACCGAAGA CGCATTAAGCATTATTAATAGACGAGGACGACCGCATCTTTTCATCACGG TAACATTTAACGCTAATTGGAAAGAGGTTACAGACAACATGCTGCCAGGA CAGAATGCATACGATCGTCCTGACCTGTGTTGTCGAGTATTCAAGCAAAA GATGAAAGAGATCATGAAGGTACTCAAGTCAGGCAAGATTTTCGGTCCAT ATGATTCCCACCTCTCCGTGACAGAGTTTCAGAAACGTGGTTACCCGCAT GCCCATGTCTTGATGACTTTCAAAAACGCCGGGCCTGATGCTCTCAACGA AATTGACAAATGGGTTTGGGCTCAGCTACCAAGCGAAGACATTGCCGGAG GAAAATTAAGAGAAAAAGTTCTAAAGTACATGATACACAGACCTTGTGGA GCACACAACGTAAACGCGCCTTGCATGCAGACAAGCAAAAGCACCAACAA AAAGTCCTGCAATAAATACTATCCACAACCATTCAGAACCGTTGCAACAG TCAGTGAAAAATCGGGAAGAGCAGAGTATAAACGAGTAAACAACGGTGAC AACCCAACCATTAGAATGCGCGTAGACGGAAAGTTCAAAGACGTAAAAAT TGGTAATGAGTGGGTAGTGCCCTACAACCCAATGTTACTCATGCTTTTTG ATTGCCACGTTTGCGTTGATATCGTCACTGCGACTGCCTGTGTTCAATAT CTCTTCAAATATTGCCACAAAGGGGCGGATTTTGCGAAGGCTCGCATAAG CGGAATTACAAGCGAAATTGAGCAATATAGAAAAACAAGATACATATCAG CGGCAGAAGCGACATGGAGACTCCTAGGTTATAACATGATGGATAGATAT CCAGCAGTCACTAAGATTCACGCACACCTTGAAGGTGAACAAAACATAAC CTTCCCTCAGAATGCCACCCACGAACAACGTCTGCAGATTGTGGAGGATA CGCAGACACACCTCCTGAAATATTTCAAACGGCCCGAAAACGATTGCTTC TCACAACTAACGATTTTGGACTACTACGAGCAATACACTGTCACTACACC CAAGAAAACCGACGCTCCGCTCGACTTTGCACCCCTCGGTAAATACTTAG ATGGCTACAAAAACATCGTGTCCAAACGGAAAAAAGACGATCATGTTTGT CGCATATCCTTTCAGAATCCTGCCGTAGGTGATCTTTTCTACTTGAGACT CCTGCTTCATCGACTACCCAGCAGATCTTATGTTGAATTGCGTACAGTAC AAAACATCCCCAACGACCCTGTTATACACTCAACATTTCACGACGCCGCT AGAGCTAGAGGCCTTATTACCGGAGACGAGGAATACACATTATGCATGGA GGAAGCCTCTGCCTTTCACGTCGCCAGTCAGCTCCGAGCGCTTTTCGTTA CCCTTATCTTAGATGGCGCTCCCGCACCGAAATTATGGCGTGAGTTCAAA GATGGTTTAATAGACGATTTCCTTAGGACACTTTCCACCCCCGATGCCAC CATGGCCGCCCTGCGAGATATCGATTTGAAGCTTAAACTGCACGGTAAAT CAAACGAACAGGTCAACCTCCCCGCTGTAGTTCACACCCACACCGAATTT GAGAGGATGCGCATGGCATTTGATCCGACCACGTGTACCGCATATGCAGA CTTGCATGAGCCCAGCCTAACTCCTGAGCAGAAAGATGTTTACACGACTG TCCTTCAAGCCGTTAGAGATGCAAATGGTCAACCTATCATGATAGATGCT CCTGCAGGTACGGGTAAAACATACACCGAAAAATGCATAGCGGCTAGGTT ACGGGGTGAGGACAAAACCGTTCTAATTGTTGCGTCTACAGGTATAGCTG CGTTGCAACTGCCAGGTGGCTGGACTGCACATTCAATGTTCAAATTGCCA ATGGACGACGCCTTGACCTCATCGTGTGTGTGCAACATCAAAACTCAGAC TCAACGCGCCGAGCTTATACGCAAATCTGACCTCATTATATGGGACGAGC TACCCATGACTCACCGTTACTGTGTGGAAGCCCTCAACAGAACTCTCCAA GACCTCATGAAAAACAAAAAAATATTCGGTGGCAAAACAGTCCTTTTTAG TGGTGACTGGCGTCAAACAGGCCCAATCGTAAAGAACGGCTCAGCTACAG ACACAGTCGACGCTGCATTCATCTCCAGCCCGTTGTGGAAAGATGTTAAA CGCATGAAATTAACCAAATCACAACGGGACCGGTCCGACCCTCAGTACGC AGCTTTTGTTCGGGCTGTTGGGGAAGGTTCACAACCTACAATAACCATGA ACGGATCAGATATGATTGCCTTACACAACCACGACGACCCAGACCATAAC AACCATTTTCAATTACAATACACCACAGAGTTTGATGACCTCATCGATTT CGTTTACCCCGATGTCACAGAAGACTCCAGCAAATGGAATAATCGAGCTA TCCTCGCCACCACAAACAACGCCATAGACCGCTCAAACATTGCAGTTTCG GACAAGCGACCCGGTAGTGACTGTTCCTTTTTCAGTTCGGACTCCCTTAT AAGAGACGAAACAACATCTCACACAGCCTTCGCATCACCTGAACACCTTA ACCAACTCAACGTACAAGGTGTCCCACCACATGAGCTCATCATTAAGTCA GACGGTCTTGCGATGATAACACGTAACCTCAACTTCTCAGAAGGACTCGT CAACGGACAAAAATGTGTATTGCACGCCGTTTCCCCTAACAGTCGGGTTA TTCAGGTAGAACTACTCACGGATGAAACTCCCAGACCCATAGTTTTAATT CCGAGAATTGGGTTCACCGCTAAGGTGGGCAGGAACGGCATAAACTTCAT GCGTGTCCAGTTTCCACTAAGAACCGCTTACTCCATGACCATCAACAAAA GCCAAGGACAAACACTGAAGAAAATAGGTTTAGATTTGAGATCCCCAGCT TTCAGTCACGGTCAACTCTACGTTGCACTTTCGAGGGCACCTACCCGCCT ATCCGTAATGTGTCTCCTGCCGCCTGAGCATATCCTTGAAGGGACGCCGT ACACGGAAAACGTTGTTTACCCTCCCTTCATTCACGCCGCCAACGATACA TCACCATCATCTCTCCCTCCTTCCCTAATCCTCCACCGCCTACTTTACCT CCTCCACCATCCACAACCTGTATGGACTGTTCAGCATGAGGTTGGCGACG GAGCTTGCGGCTTTCGAGCAATTGCTAGACATTTCCTCGGTGATCCTGAG TTGCACTTACAAGCACGACATCAAATTGTACTGTACCTTGCACACAACAG TCAGGACGTTAACCTACACATCCACGACGGCATTAACACAGAACTTCTTT ACTGTTCAGATTCACCACCCTCTACATACTCCTCTTACGGCGACTACCTC TCAAGAATGTCCATGCCTACCACGTACATGGGCCAACCCGAAATTACTGC TGCTATCGCAGTCTATGGAACCCCTTTTATTCCACACTTCCAAAGCTCAA CCTTACCGCACCCAGCCATCGCTAATCTCAATGAACTTCACTTAAGGTTC ACACCTGCCTCACGTCATTACGACACCTTCACCCTATCAAACCCTGCCGC TCAATCCTAACATGACCCGTTACGATTCAACGGTGCACTATTTCCTGTTC AGGGCGACTCCACAAGCGCGGAGTCGACTCCTCGCGACACCCTCATGACG GTCTCACGGTGTGCTGAAAGGGTCGGGCAACTTCGGGGCTGTGTCGTTCT GTACCTGGAACTACCTGCTTGCCCATAGACACAACCACCAGAGTGCCGCA CGACGTCTACGTCGACTAAACTTTGGTCGACACACTAATCGCATTTCGAG CGATGATTCTTTATTCGTCGGTATCAATGCCGTAAGCTGCGAACTTCCGG TTACCTCTTACAGTAGTTCTGCCTTAGACGTACCTTTGCCTCGTTACTAC TACGTGACATTTCGTTAGAGTGTTTCCGTTTCCACGGCGTTTTCTGTCGT CCAACTTTGCGGTATATTTCCCCTTAGCGTTTCCGCTCTTCAGCGTTGGT TTCCTGTTGTCTTCGGTGCCTTCGGTTTCTGTTCCTTCAGTGTACATATT CAGGTCTCCATGGTCTTTTCCTTACGCTTCCACTTCTTTCGGCGTCGGTT TCCTGTAAGTACCTTTAGCATTGCAGCTTTCCCTGTCGACGCTTATCCGC ATGGTCTTTTCGTTTCCTTCGCGTTTTCTGTCGCCTTCAGTGACCACGTT CAGGTCGCCATGATCTTTCGTTACGCTTCCACTTCTTTCGGCGTTGGTTT CCTCTTGTGTTCACTGTCGATGCTCATCGGCATAATCTTTTCGTTTCCTT GGCGTCTTCTGTCGCCTTCAGTGTACACGTTCAGGTCGCCATGATGTTTT CGTTACGCTTCCGCTTCTTTCGTCTTTGGTTTTCTCTAAGTACCTTAAGC GTTGCATCTTTCCCTGTCGACGCTTATCTGCATGATCTTTTCGTTTCCTT CCCGTTTTCTGTCGCCTTCAGTGACCACGTTCAGGTCGCCATGATCTTTC GTTACGCTTCCACTTCTTTCGGCCTACGTATCCTGTTGTTCAGTACCTTT GGCGTTGCACCTTTCGCTGTGGATGCTCATCAGCATTACTTTTCTTTTTC ACTCCTTACCATTTGGATGTGAGGCGTTCGTTTCGTGTTTGCCCTGAATT CACTTCGCTGTAGTGTTGTCCTCAGTATTTTCACTTTTAATTCAAGTTTT CTTCCAACACCTGCGTATAAACGCGCGCTTCTTCTTCACCTCCACCATCC CACCAACAGTCATTTGCAGGACATCACCGGATAGTGAACGCGTCTGATCT TCACGGTGTCCTCACCAGTCTCACCCTTGGTATGCCGACTCACATTTCAT ACACATATGTTATCATTCCGCACACGCACCAGAGGCCGAGGGGACCGACA GGCCCCCCGGCCGGAGCCCTTGTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig139:474998..481021-

>mRNA_P-littoralis_Contig139.121.1 ID=mRNA_P-littoralis_Contig139.121.1|Name=mRNA_P-littoralis_Contig139.121.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2265bp|location=Sequence derived from alignment at P-littoralis_Contig139:474998..481021- (Pylaiella littoralis U1_48)
ATGGAGGAAGCCTCTGCCTTTCACGTCGCCAGTCAGCTCCGAGCGCTTTT
CGTTACCCTTATCTTAGATGGCGCTCCCGCACCGAAATTATGGCGTGAGT
TCAAAGATGGTTTAATAGACGATTTCCTTAGGACACTTTCCACCCCCGAT
GCCACCATGGCCGCCCTGCGAGATATCGATTTGAAGCTTAAACTGCACGG
TAAATCAAACGAACAGGTCAACCTCCCCGCTGTAGTTCACACCCACACCG
AATTTGAGAGGATGCGCATGGCATTTGATCCGACCACGTGTACCGCATAT
GCAGACTTGCATGAGCCCAGCCTAACTCCTGAGCAGAAAGATGTTTACAC
GACTGTCCTTCAAGCCGTTAGAGATGCAAATGGTCAACCTATCATGATAG
ATGCTCCTGCAGGTACGGGTAAAACATACACCGAAAAATGCATAGCGGCT
AGGTTACGGGGTGAGGACAAAACCGTTCTAATTGTTGCGTCTACAGGTAT
AGCTGCGTTGCAACTGCCAGGTGGCTGGACTGCACATTCAATGTTCAAAT
TGCCAATGGACGACGCCTTGACCTCATCGTGTGTGTGCAACATCAAAACT
CAGACTCAACGCGCCGAGCTTATACGCAAATCTGACCTCATTATATGGGA
CGAGCTACCCATGACTCACCGTTACTGTGTGGAAGCCCTCAACAGAACTC
TCCAAGACCTCATGAAAAACAAAAAAATATTCGGTGGCAAAACAGTCCTT
TTTAGTGGTGACTGGCGTCAAACAGGCCCAATCGTAAAGAACGGCTCAGC
TACAGACACAGTCGACGCTGCATTCATCTCCAGCCCGTTGTGGAAAGATG
TTAAACGCATGAAATTAACCAAATCACAACGGGACCGGTCCGACCCTCAG
TACGCAGCTTTTGTTCGGGCTGTTGGGGAAGGTTCACAACCTACAATAAC
CATGAACGGATCAGATATGATTGCCTTACACAACCACGACGACCCAGACC
ATAACAACCATTTTCAATTACAATACACCACAGAGTTTGATGACCTCATC
GATTTCGTTTACCCCGATGTCACAGAAGACTCCAGCAAATGGAATAATCG
AGCTATCCTCGCCACCACAAACAACGCCATAGACCGCTCAAACATTGCAG
TTTCGGACAAGCGACCCGGTAGTGACTGTTCCTTTTTCAGTTCGGACTCC
CTTATAAGAGACGAAACAACATCTCACACAGCCTTCGCATCACCTGAACA
CCTTAACCAACTCAACGTACAAGGTGTCCCACCACATGAGCTCATCATTA
AGTCAGACGGTCTTGCGATGATAACACGTAACCTCAACTTCTCAGAAGGA
CTCGTCAACGGACAAAAATGTGTATTGCACGCCGTTTCCCCTAACAGTCG
GGTTATTCAGGTAGAACTACTCACGGATGAAACTCCCAGACCCATAGTTT
TAATTCCGAGAATTGGGTTCACCGCTAAGGTGGGCAGGAACGGCATAAAC
TTCATGCGTGTCCAGTTTCCACTAAGAACCGCTTACTCCATGACCATCAA
CAAAAGCCAAGGACAAACACTGAAGAAAATAGGTTTAGATTTGAGATCCC
CAGCTTTCAGTCACGGTCAACTCTACGTTGCACTTTCGAGGGCACCTACC
CGCCTATCCGTAATGTGTCTCCTGCCGCCTGAGCATATCCTTGAAGGGAC
GCCGTACACGGAAAACGTTGTTTACCCTCCCTTCATTCACGCCGCCAACG
ATACATCACCATCATCTCTCCCTCCTTCCCTAATCCTCCACCGCCTACTT
TACCTCCTCCACCATCCACAACCTGTATGGACTGTTCAGCATGAGGTTGG
CGACGGAGCTTGCGGCTTTCGAGCAATTGCTAGACATTTCCTCGGTGATC
CTGAGTTGCACTTACAAGCACGACATCAAATTGTACTGTACCTTGCACAC
AACAGTCAGGACGTTAACCTACACATCCACGACGGCATTAACACAGAACT
TCTTTACTGTTCAGATTCACCACCCTCTACATACTCCTCTTACGGCGACT
ACCTCTCAAGAATGTCCATGCCTACCACGTACATGGGCCAACCCGAAATT
ACTGCTGCTATCGCAGTCTATGGAACCCCTTTTATTCCACACTTCCAAAG
CTCAACCTTACCGCACCCAGCCATCGCTAATCTCAATGAACTTCACTTAA
GGTTCACACCTGCCTCACGTCATTACGACACCTTCACCCTATCAAACCCT
GCCGCTCAATCCTAA
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