mRNA_P-littoralis_Contig139.121.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE) HSP 1 Score: 702 bits (1812), Expect = 6.620e-233 Identity = 362/537 (67.41%), Postives = 420/537 (78.21%), Query Frame = 3
Query: 2391 MIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMN-GSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFIHAAN--DTSP-SSLPPSLILHRLLYLLHHPQPV---------------------------WTVQHEVGDGACGFRAIARHFLGDPELH 3908
MIDAPAGTGKT+TEKC+A+RLRGEDK VLIVASTGIAALQLPGGWTAHSMFKLPMDD LT SCVCNI +QTQRAELIR+S+LIIWDELPMTHRYCVEAL+RTL+DLM + FGGKT+LFSGDWRQTGPIVKN + TDTVDAAFISSPLWK V R +L KSQRD+ DPQYA+FVR++GEGS+PT+TM+ GS + L+NHD+ D NHFQL+YTT+FD+L+ FVYPD+++ S WN RAILATTN++IDRSN +SD RPG+ SFFSSDSLI DE TAFASPEHLNQLNVQG+PPHEL +K+D LA+ITRNLNFSEGLVNGQKCV+ AVS +SRV+QV+LLT+E PRPIVLIPRI F KVGRNGI F R QFPLRTAYSMTINKSQGQTL KIGLDLRS F+HGQLYVALSR+ R S+MCLLP HI++G PYT+N+VYPP I AA D P +S+ S+ + + WTV E+GDGAC R ++R+ G P H
Sbjct: 1 MIDAPAGTGKTFTEKCLASRLRGEDKVVLIVASTGIAALQLPGGWTAHSMFKLPMDDNLTPSCVCNISSQTQRAELIRQSNLIIWDELPMTHRYCVEALDRTLKDLMAVDQPFGGKTILFSGDWRQTGPIVKNAAPTDTVDAAFISSPLWKGVMRFRLNKSQRDKEDPQYASFVRSIGEGSRPTVTMSDGSKLTPLNNHDNEDTANHFQLRYTTDFDELLRFVYPDLSQQSRIWNTRAILATTNHSIDRSNDTISDNRPGNYVSFFSSDSLISDEKNRRTAFASPEHLNQLNVQGIPPHELKLKTDTLALITRNLNFSEGLVNGQKCVVLAVSASSRVLQVQLLTEERPRPIVLIPRINFQGKVGRNGICFTRKQFPLRTAYSMTINKSQGQTLSKIGLDLRSSPFAHGQLYVALSRSQNRTSIMCLLPDTHIIDGIPYTDNIVYPPLIQAATFGDYHPGNSISGSVGGDKDTQSCDGDEESVDDADKDDXXXXXXXXXXXANADSLGSWTVLDEIGDGACMLRCVSRYIYGSPITH 537
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE) HSP 1 Score: 621 bits (1602), Expect = 9.700e-198 Identity = 354/708 (50.00%), Postives = 450/708 (63.56%), Query Frame = 3
Query: 1746 YLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAV---------------GEGSQPTITMN-GSDMIAL-------HNHDDPDHNNHFQLQYTTEFDDLIDFVYPDV-TEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHI---LEGTPYTENVVYPPFIHAANDTSPSS--LPPSLI 3782
+ D ++ V+ R D HV R+S +P GD+F+LRLLLH P+RS+ +LRT +D ++ TF DAARA G+I D+EY +C++EA F+ QLR LFVTLILDGAPA LW +F +D +S DA ALR IDL L+ HG++NE V L AVVH TE+ R + FDP +A+ D H +LT EQ+ VY TV+ +V MIDAPAGTGKTYTE + ARLR K VL VASTGIA LQLPGGWTAHSMFKLP++D S +CNI ++QRAE++RK DLI+WDE+PM+HR+ VEALN TLQDLM N I GGKTVL SGD RQ GP +K+G T+DA+ ISSPLW V+RM+LT SQR R + AA+VR G G+Q T N G D + L D P + F + T F++LIDFVY D+ T D + + RAIL++TN ID N V D PG + +S D++ D ++ F + LN ++V GVPPH L +K + + MITRNLNF +GLVNGQK ++ S +R++ VELL + +VLIPRI AKVGRNGI F R+Q PLR Y++TINKSQGQTL KIGLDLRS F+HGQLYVALSRA R S+MCL P + L T + N+ +P F++AA DT S LPP I
Sbjct: 106 FRDKFRIYVTPRSSDKHVARVSVMSPDKGDVFFLRLLLHHKPARSFEQLRT-----HDDTVYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTEDLRINMSDRDANNTALRQIDLGLQHHGRTNEVVGLTAVVHLDTEYMRFKHMFDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEDKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPFIKHGGPAGTIDASLISSPLWPHVQRMRLTISQRHRKN---AAYVRCFCSKCRYVGMSVCXXXGIGTQAHTTANDGIDAVPLAYRLFMKFRTDSP--KDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSSTNATIDLINSHVLDILPGDMLTAYSCDTV--DPHDNNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSS--LVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTHGQLYVALSRAQKRSSIMCLTLPARLRGSLNRTAFVANITFPAFVNAATDTITDSPPLPPQYI 797
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE) HSP 1 Score: 554 bits (1427), Expect = 2.670e-172 Identity = 312/657 (47.49%), Postives = 396/657 (60.27%), Query Frame = 3
Query: 1629 KRPENDCFSQLTILDYYEQYTVTTPKKTDAPLDFAPLGKYLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQ-DLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRS 3596
+RP + F LT LDY EQY V K + D ++N V+ R D HV R+S +P GD+FYLRLLLH P+RS+ +LRT +D ++ TF DAARA G+I D+EY +C++EA F+ QLR LFVTLILDGAPA LW +F +D +S DA ALR IDL L+ HG++NE V LPAV+H TE+ R + FDP +A+ D H +LT EQ+ VY TV+ +V MIDAPAGTGKTYTE + ARLR K VL VASTGIA LQLPGGWTAHSMFKLP+++ S +CNI ++QRAE++RK DLI+WDE+PM+HR+ VEALN TLQ DL+ N I GGKTVL SGD RQ GP+VK+G +T+DA+ ISSPLW V+RM+LT SQRDR D YA+ AIL++TN ID N V D PG + +S D++ D ++ F + LN ++V GVPPH L +K + + MITRNLNF +GLVNGQK ++ S +R++ VELL + +VLIPRI AKVGRNGI F R+Q PLR Y++TINKSQGQT+ KIGLDLRS
Sbjct: 237 RRPSDQTFYSLTYLDYNEQYIVKKDKARQGTF-------FRDKFRNYVTPRSSDKHVARVSAMSPDKGDVFYLRLLLHHKPARSFEQLRT-----HDDTVYDTFQDAARAMGIIKHDDEYRICLQEAVIFNTGRQLRELFVTLILDGAPAKILWEQFNQDFTEDLRINMSDRDANNTALRQIDLVLQHHGRTNEVVGLPAVIHLDTEYIRFKHMFDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEEKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQADLLGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRDREDAAYAS----------------------------------------------------------------AILSSTNATIDLINSHVLDILPGDMLTAYSCDTV--DPHDNNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSS--LVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTVPKIGLDLRS 811
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE) HSP 1 Score: 509 bits (1311), Expect = 2.780e-161 Identity = 271/448 (60.49%), Postives = 330/448 (73.66%), Query Frame = 3
Query: 2259 MRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGS-ATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMN-GSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETT--SHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDL 3590
M AFDP+ TAYAD EP LT Q+ VY V+ AVR+ QP MIDAPAGTGK++TEK IAARLR VLIVASTGIAALQLPGGWTAHSMFKLP+++ L C+IK+++QRAELIRK II+DELPMTHR C+E L RTL+D+ +++ ++GG T+ FSGDWRQ GP+ + A TV+A+FISS LW KRM+LT SQRD DP YA+FVR++GE PT T + G+ + L N D +HF LQYTT+F+DLI+FVYPD+ ED+ N+RAILATTN +ID N A+S +R G + +F SSD LI+D S TAF S EHLN ++ GVPPH+L IKSD LAM+ RNL FSEGLVNGQK V+ VSPNSRV++VEL +D + IVLI R F A+VGRNGI F RVQFPLR AYS+TIN SQGQTL +IGLDL
Sbjct: 1 MIAAFDPSAQTAYADRFEPGLTSGQRVVYNAVVDAVRNNQPQPFMIDAPAGTGKSHTEKVIAARLREGFTAVLIVASTGIAALQLPGGWTAHSMFKLPLNEKLVDGAFCDIKSESQRAELIRKRTFIIFDELPMTHRCCIETLERTLRDIRRSEALYGGITICFSGDWRQCGPVAPFATPAETTVEASFISSDLWPKTKRMRLTMSQRDEEDPAYASFVRSIGEKIHPTTTFSDGAKRVPLSNTHDTSTTDHFSLQYTTDFNDLINFVYPDIHEDARHLNDRAILATTNISIDSCNDAISSRRHGDNVTFHSSDRLIKDHNNPASSTAFRSTEHLNNIDTPGVPPHQLQIKSDALAMLIRNLIFSEGLVNGQKVVIRGVSPNSRVVRVELSSDHS---IVLILRTSFHAQVGRNGITFNRVQFPLRIAYSLTINNSQGQTLSRIGLDL 445
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE) HSP 1 Score: 457 bits (1175), Expect = 4.200e-143 Identity = 243/420 (57.86%), Postives = 285/420 (67.86%), Query Frame = 3
Query: 2553 MDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFIHAA----NDTSPSSLPPSLILHRLLY 3800
MDD +T SCVCNI QTQRA L+R SDLIIWDELPMTHRYCVEAL+RTL+DLM+N ++FGGKT+LFSGDWRQTGPIVK+GS TDTVDAA ISS WK + R++LTKSQRD+ DP YA+FVR VGE PT SDSLI+DE+++ TAFA+PEHLNQL+V G+PPHEL +KS+GLAM+ RNLNF+EGLVNGQKC+L VSPNSRVIQVELLTD+ P PIVLIPRI FTA+VGRNGI+FMRVQFPLR+AY+MTINKSQGQTLKKIGLDLRS F+HGQLYVAL+RA R +VM LLP +++G PYTENVVY PF AA N+ +P S P L H +++
Sbjct: 1 MDDKMTPSCVCNISAQTQRAALLRSSDLIIWDELPMTHRYCVEALDRTLKDLMRNDRLFGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKHISRLRLTKSQRDKDDPAYASFVRNVGEDKLPT----------------------------------------------------------------------------------SDSLIKDESSTSTAFAAPEHLNQLHVSGIPPHELQLKSNGLAMLVRNLNFAEGLVNGQKCILKGVSPNSRVIQVELLTDDLPHPIVLIPRINFTAQVGRNGISFMRVQFPLRSAYAMTINKSQGQTLKKIGLDLRSSPFAHGQLYVALTRAQKRSTVMVLLPHSQVVDGVPYTENVVYAPFTEAATGETNNLNPHSGTP-LTYHEMVF 337
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 2.470e-125 Identity = 239/473 (50.53%), Postives = 299/473 (63.21%), Query Frame = 3
Query: 2391 MIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIAL-HNHDDPDH-NNHFQLQYTTEFDDLIDFVYPDV-TEDSSKWNNRAI-LATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHI---LEGTPYTENVVYPPFIHAANDTSPSS--LPPSLI 3782
MIDAPAGTGKTYTE + ARLR K VL VASTGIA LQLPGGWTAHSMFKLP+++ S +CNI ++QRAE++RK DLI+WDE+PM+HR+ VEALN TLQDLM N I GGKTVL SGD RQ GP+VK+G +T+DA+ ISSPLW V+RM+LT SQR ++ T T +G D + L + H+ PD + F + T F++LIDFVY D+ T D + + RAI L +N +D F + LN ++V GVPPH L +K + + MITRNLNF +GLVNGQK ++ S +R++ VELL + +VLIPRI AKVGRNGI F R+Q PLR Y++TINKSQGQTL KIGLDLRS F+HGQLYVALSRA R S+MCL P + L T + N+ +P F++AA DT S LPP I
Sbjct: 1 MIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEEKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRTQAH----------------TTTDDGIDAVPLAYIHEVPDSPKDQFFIDNTDSFEELIDFVYQDILTADPTDFKARAICLDPHDNNLD---------------------------------FVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSS--LVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTHGQLYVALSRAQKRSSIMCLTLPARLRGSLNRTAFVANITFPAFVNAATDTITDSPPLPPQYI 420
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E) HSP 1 Score: 441 bits (1134), Expect = 4.600e-125 Identity = 292/759 (38.47%), Postives = 415/759 (54.68%), Query Frame = 3
Query: 1470 LACRQAKAPTKSPAINTIHNHSEPLQQSVKNREEQSINE*TTVTTQPHLLKYFKRPENDCFSQLTILDYYEQYTV-TTPKKTDAPLDFAPLGKYLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD-ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAVRDANGQPIM-IDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYP-DVTEDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLI----RDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRP-IVLIPRIGFTAKVGRNGINFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVV 3719
++CR+ P + +H H E Q +V + Q + ++ +L Y RP+ + LT L+++EQ+ V TT K+ + P + DG ++ + KR++ V R+ + +P +G+LF+LR+LL + P RSY +LRTV D VI++TF +AA ARGL+ E+ ++EASAF LR LF +I+ GAPA LW +FKD L +D++ A AL DID L+ HG+ + LP V TE R +D A P LT EQ V ++ AV + + ID P+GTGKT I ARLR E VL ASTGIAAL GG TAHSMF+LP++ C + +QRAELIR++ LIIWDE PM H+ VE L+R L+D+ +N++ FGGK ++ +GD+RQ PI+ +G+ D ++A+ SS LW ++ + +L R R D Y FV VGE P+I++ I L + T +DL++FVYP DV + + RAIL+ TN I N AV P S+DS D HT + LN ++ GVP H L +K + ++ RN++F++GLVNG K + +S R ++ + RP VLIPRI F +V +GI +R QFPL+ AY MTINK+QGQTL K+GLDLRS FSHGQLYVAL R + L+P + IL+ P+T N+V
Sbjct: 822 ISCRE-------PTVINLHIHLEQ-QDNVIFQPGQEME--ALQRSKSNLWLYLNRPDTPELTSLTYLEFFEQFIVETTEKRGNEP--------FADG-RHFLKKRQRGKCVARLRWLSPTLGELFFLRMLLIKFPCRSYEDLRTV-----DGVIYATFQEAAMARGLLDEQSEFDHALQEASAFKTGRGLRQLFFAVIMFGAPAAILWEKFKDCLSEDYMGNEDNARIAHRRALCDIDHMLRPHGRCLRDMGLPEVEDVSTELGREVTRWDAEDAARSALEWRPKLTEEQLSVSDAIINAVTGEDENKVFFIDGPSGTGKTVVLNYITARLRSEGAVVLCTASTGIAALNHLGGITAHSMFQLPLETN-DPHATCGVTGGSQRAELIRRASLIIWDEAPMAHKVTVEILDRCLRDICQNRQAFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLWPNIIKKRLRTILRSREDQDYTDFVLEVGENKVPSISIGIYRPIPLR-----------MIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHT-----DVLNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFVEKIS--RRFVEARV----PGRPDTVLIPRICFKFQVSNSGIEMIRRQFPLKVAYGMTINKAQGQTLDKVGLDLRSDVFSHGQLYVALGRVRRAADIRVLVPEDRILDECPHTANIV 1533
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51) HSP 1 Score: 419 bits (1076), Expect = 1.070e-120 Identity = 268/719 (37.27%), Postives = 397/719 (55.22%), Query Frame = 3
Query: 1614 LLKYFKRPENDCFSQLTILDYYEQYTVTTPKKTDAPLDFAPLGKYLDGYKNIVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDATMA---ALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAV-----RDANGQPIMIDAPAGTGKTYTEKCIAARLRGEDKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNG-SATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQP--TITMNGS--DMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVT-EDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNG-INFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYP 3725
L+ YFKRP + F LT LD+YE+Y V + + T ++ L +++R++ + V R+ + P G+LFYLRLLL P RSY +L + P+ TF +AA+A G+ + EY + M+EAS F +LR+ FV L ++G LW +++ + DFL+ LS DA A L ID + HG S + LP V+ TE R R+ ++ + P L+P+Q V+ + + R++N I ID PAGTGKT I A RG VL AS+GIAA GG TAHSMFK P++ + +I +QRAEL+R++D+II+DE PM H+Y + L+R+L+DLM KIFGGK V+F+GD+RQ P+V S +D ++ + SSP+W+ +K L+ SQR+R DP+Y+ F+ +G P T+ +N S +++ L +H L Y T+ +DLIDFV+ V + RAIL T N + N V D+ F+S D ++ + T F + LN+L +GVP H+L +K + MI RNL+FS+ LVNG K ++ +P +++ T+E LIPRI F A + + I R QFPL Y+MT++KSQGQT+ ++G+DLRS FSHGQLYVAL R + + L+ + +++ NVVYP
Sbjct: 388 LITYFKRPLGEQFDNLTYLDFYERYIVHSRRPTTRNVEIFELSN-----NKFLTRRQRGELVSRLFWVAPNRGELFYLRLLLASQPCRSYDDLYKL----GGPLC-KTFQEAAKALGIADDEAEYEIAMQEASTFLTGPRLRSFFVLLAVNGVRVVSLWDKYRHLISQDFLQRLSD-DAEKAYKLCLIQIDRLFRRHGTSLVEQGLPGVIDDSTEVGRERVEYNRDELNTFVSSWLPKLSPDQNLVFNYIHTLLSDSEFRNSNNTAIFIDGPAGTGKTLLLNVITAHARGNSGIVLCTASSGIAAQNYVGGITAHSMFKFPLNP-VDDLGYWSITNGSQRAELVRQADVIIYDEAPMAHKYLIHLLDRSLRDLMNCNKIFGGKIVIFAGDFRQIPPVVVRAKSNSDIINCSVKSSPIWEQIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSH----------LSYVTDLNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSENTDE--IFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTPRIIIVRKPGETNE-----FLIPRILFKAPIEPDSPIEMTRRQFPLALCYAMTVHKSQGQTINRVGVDLRSDVFSHGQLYVALGRVQEKSDIKILVSRDKLIDNKLLLNNVVYP 1077
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66) HSP 1 Score: 405 bits (1041), Expect = 1.170e-114 Identity = 265/727 (36.45%), Postives = 395/727 (54.33%), Query Frame = 3
Query: 1602 TQPHLLKYFKRPENDCFSQLTILDYYEQYTV--TTPKKTDAPLDFAPLGKYLDGYKN-IVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD----ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVLQAV-----RDANGQPIMIDAPAGTGKTYTEKCIAARLRGE-DKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNGSA-TDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVT-EDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNG-INFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFI 3734
T L+ YF RP F LT D+YE+Y + T P+ + + L+ N V++R++ + V R+ F P G+ FYLRLLL P RSY R + N+ + TF +AA+ GL + EY M EA AF +LR FV L ++G P LW +F++ + +DF+ PD A + L ID L+ HG + LP V TE R + ++ + + P L+PEQ +++ V + V R+++ I ID P GTGKT I A +RG + VL AS+GIAA G TAHSMF+ P++ + NI +QRAELI ++LII+DE PM H++ + L R+L+DL K KIFGGK ++F+GD+RQ P+V + +D +A+ SSP+W+ +K L SQR R D +++ F+ +G ++T++ + + + N + + ++ DDLIDFVYP+V + +RAIL+T N ++ N + + P F+S D ++ D F + LN++ +G+P H+L +K + M+ RNLNFS+ LVNG K ++ SP ++ L+D+ LIPRI F A V I R QFPL+ Y+MTI+KSQGQT+ ++G+DLRS FSHGQLYVALSRA R ++ L+ E ++ G P NVVYPP +
Sbjct: 547 TTSDLITYFNRPAGLNFDNLTYQDFYEKYIIHATRPRTKNVEI--------LETSNNRFVTRRQRGELVARLFFVAPNRGEQFYLRLLLASYPCRSY---RDLLNLGGPDCM--TFQEAAKTVGLANDEAEYEKAMTEACAFFTGPRLRNFFVLLAVNGIPVASLWSKFRNQISEDFIHR--QPDDIDRAYHSCLVIIDRLLRRHGTCLIEQGLPDVADETTELGREQTEYNRNVLKNFVNDWLPKLSPEQNEIFEYVNKLVTNQNFRESHNSAIFIDGPGGTGKTLLLNVITAHVRGNLNGIVLCTASSGIAAQNHENGTTAHSMFRFPLN-LVDDLGYWNITNGSQRAELILNANLIIFDEAPMAHKWLIHLLERSLRDLTKIDKIFGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQKLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-------NLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQ--IFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDD-----YLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILVNEERVINGNPLANNVVYPPLL 1243
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Match: UPI001568188F (uncharacterized protein LOC117996074 n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568188F) HSP 1 Score: 412 bits (1060), Expect = 2.560e-114 Identity = 270/727 (37.14%), Postives = 396/727 (54.47%), Query Frame = 3
Query: 1602 TQPHLLKYFKRPENDCFSQLTILDYYEQYTV--TTPKKTDAPLDFAPLGKYLDGYKN-IVSKRKKDDHVCRISFQNPAVGDLFYLRLLLHRLPSRSYVELRTVQNIPNDPVIHSTFHDAARARGLITGDEEYTLCMEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPD----ATMAALRDIDLKLKLHGKSNEQVNLPAVVHTHTEFERMRMAFDPTTCTAYADLHEPSLTPEQKDVYTTVL-----QAVRDANGQPIMIDAPAGTGKTYTEKCIAARLRGE-DKTVLIVASTGIAALQLPGGWTAHSMFKLPMDDALTSSCVCNIKTQTQRAELIRKSDLIIWDELPMTHRYCVEALNRTLQDLMKNKKIFGGKTVLFSGDWRQTGPIVKNG-SATDTVDAAFISSPLWKDVKRMKLTKSQRDRSDPQYAAFVRAVGEGSQPTITMNGSDMIALHNHDDPDHNNHFQLQYTTEFDDLIDFVYPDVT-EDSSKWNNRAILATTNNAIDRSNIAVSDKRPGSDCSFFSSDSLIRDETTSHTAFASPEHLNQLNVQGVPPHELIIKSDGLAMITRNLNFSEGLVNGQKCVLHAVSPNSRVIQVELLTDETPRPIVLIPRIGFTAKVGRNG-INFMRVQFPLRTAYSMTINKSQGQTLKKIGLDLRSPAFSHGQLYVALSRAPTRLSVMCLLPPEHILEGTPYTENVVYPPFI 3734
T L+ YF RP F +LT D+YE+Y V T P+ + + L+ N V++R++ + V R+ F P G+ FYLRLLL P RSY R + N+ + TF +AA+ GL + EY M EA AF +LR FV L ++G P LW +F+D + +DF+ PD A + L ID L+ HG + LP V TE R + ++ T + + P L+PEQ +++ V Q+ R I ID P GTGKT I A +RG + VL AS+GIAA G TAHSMF+ P++ + NI +QRAELI +++II+DE PM H++ + L R+L+DLMKN KIFGGK ++F+GD+RQ P+V + S +D +A+ SSP+W+ +K L SQR R D +++ F+ +G ++T++ + + + N + + E DDLIDFVYP+V + +RAIL+T N ++ N + + P F+S D ++ D F + LN+++ +G+P H+L +K + MI RNLNFS+ LVNG K ++ SP ++ L+D+ LIPRI F A + I R QFPL+ Y+MTI+KSQGQT+ ++G+DLRS FSHGQLYVALSR R ++ L+ E ++ G P NVVYPP +
Sbjct: 1106 TTSDLITYFNRPAGINFDELTYQDFYEKYIVHATRPRTKNVEI--------LETTNNRFVTQRQRGELVARLFFVAPNRGEQFYLRLLLASHPCRSY---RDLLNLGGPDCM--TFQEAAKTIGLANDEAEYEKAMTEACAFFTGPRLRNFFVLLAVNGIPVASLWTKFRDQISEDFIHR--QPDNIDRAYHSCLVAIDRLLRKHGTCLIEQGLPDVSDNTTELGREQTEYNRNTLRDFVNDWLPKLSPEQNEIFEFVNKLVTNQSFRGTQNSAIFIDGPGGTGKTLILNVITAHVRGNLNGIVLCTASSGIAAQNHENGTTAHSMFRFPLN-LVDDLEYWNITNGSQRAELIFNANVIIFDEAPMAHKWLIHLLERSLRDLMKNDKIFGGKIIIFAGDYRQIPPVVVHARSNSDVFNASVKSSPIWQKLKTFSLITSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-------NLINLSIISFVLELDDLIDFVYPNVVLNEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQ--IFLGVDALNRMHPKGIPEHDLTLKVGCVCMIMRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDD-----YLIPRIIFKAPIETGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRVQHRQNIKILVNKERVINGNPLANNVVYPPLL 1802 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig139.121.1 >prot_P-littoralis_Contig139.121.1 ID=prot_P-littoralis_Contig139.121.1|Name=mRNA_P-littoralis_Contig139.121.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=755bp MEEASAFHVASQLRALFVTLILDGAPAPKLWREFKDGLIDDFLRTLSTPDback to top mRNA from alignment at P-littoralis_Contig139:474998..481021- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig139.121.1 ID=mRNA_P-littoralis_Contig139.121.1|Name=mRNA_P-littoralis_Contig139.121.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6024bp|location=Sequence derived from alignment at P-littoralis_Contig139:474998..481021- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig139:474998..481021- >mRNA_P-littoralis_Contig139.121.1 ID=mRNA_P-littoralis_Contig139.121.1|Name=mRNA_P-littoralis_Contig139.121.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2265bp|location=Sequence derived from alignment at P-littoralis_Contig139:474998..481021- (Pylaiella littoralis U1_48)back to top |