mRNA_P-littoralis_Contig139.100.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig139.100.2 vs. uniprot
Match: D8LRQ1_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ1_ECTSI) HSP 1 Score: 717 bits (1852), Expect = 6.100e-238 Identity = 663/1158 (57.25%), Postives = 779/1158 (67.27%), Query Frame = 1
Query: 79 MRGACTLLACGWIFQRWGCTDGFTGSVWSSSLSAAVTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVASRHSGPLGDHXXXXXXXXXHVSGAALACSQTGATSTLEVQENGGDDTR-LGGAAWVEDVVDEDGE-----DFDDTGPGGNEDETG--DIDRKMGKQRKPMSTSSGGRNKLFDLLNDLEGGGG--CEAIDFLDIG----GVGGVEAGSTRQQQHGEE-VVDLLSLGSRQQHGEGVSAEAEGREEQEGMVPLELLKRTARRKFL---SRLPPLTRSQSEEWRFLPMAERIQEL--GRTGRKDPRRERNWREAMQVLAEVKEEHGERGLGLTFIYGVAMRVCLDFGHPEEVLRLFREVKTLKDSPPNRQMFDSVIVAYCQLKQRDAAVDMLVEMKESGWVPAERSYVKLLNAMRGTEGASAVADRVLRLYADEEDFDADG--LLPRNMDVCFQYLMVLAREQQWEQMLDFFRQLMERSRPPPNENCFGAVLYGLNAAGRWEETVSVMDSFRLR---------QVDKPKRGVYLSALSTLLKVAKRDEL-----EKESEAAMEVAMILWKEFQDWGLYEDIRPESAANLLHSLFTACYKHDKYWPTAMEVFKLLDTYEEEFDR-------DENMSAFRGRGAGADGEKKIDKPEP-VMPTAGEYRSMLLILS--RESARGANWERSLEVLREAQELEYPITEACFQTVITDLGYAGQPDLAFSIQDEMRMAGIPSSVNTYNRLLAVCEKSKNWDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDAANRMEGTGMGWELWRQMGVKGVEPNNYAYSAIITTAAIDRDVRTALRLLEEMKTKEMDIDVVSYTSAICACGPDWLLALDVXXXXXXXXXXXXXXXXXXXXGACFKGEEPREVINVFNRXXXXXXXXXXXXXXXXXMAHDVDENHHGRASLEAELTEAGLSLQDKEWETPWMPPPELEGGYSEIAESTYDVGPPSISGGGGGKWGDRGSGGGG-YGQFDDYEG 3411
M ACTLLACG Q W CTDGF G+ W SS S + +ASR S VSGA +ACS+T + STL+VQENGG DT+ LG A W EDGE + + G GG +G + DR ++RKP+ T++GGRNKLFDLLNDLEGGGG EAI+ L + GVGG + + G+E VVD ++L ++ + E K++A RKF R+PPLTRSQSEEWR LPMAERIQE+ + +KDP +E E MQ+L +VKEEHGERGLGLTFIY + MR CLDFG PE+V+ LF E+KT K+SPPNRQ F++ +A+ QLKQ DAA+++++EMKESGW+P ER+Y LL +RGTEGASAVA+RV++LY ++ED + G LLP +MD+C QYLMVLA +WEQ L+FF +L+ER +P P++NC+ A L+ LN + RWEET+ VM++FR + KP R ++LSALSTLL+VAKR E E+ESEAAM+ A+ +WKE + G+YE I P SA LLH LF AC KH KYWPTA+EVF L+++YE D+ +E S +RG G ++++ K E PTAGEYRSML ILS R++ RGANWERS+E+LREAQE E PI+E+ FQTV+TDLG+AG+ DLAFSI D+MRMAGIP S++TYNRLL VCEK+K W XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDVVSYTSAICACGPDWLLA XXXXXXXXXXXXXXXXXXXX FKGEEPREVINVFNR MAHD DENH+GRASLEAELTEAGLSLQDKEWET W+PPP+L G +SEI E YDVGPP +G GG+WGD+GSGGG YGQF+DYEG
Sbjct: 1 MSRACTLLACGVSLQSWVCTDGFAGNAWRSSPSGNKAEKTATHTCVAAPPAEAATAGWQQRRPAAR---------VLASRSS-------------CRRVSGATIACSRTESASTLQVQENGGGDTQQLGDAPW------EDGEGAAADEIEAAGAGGASTPSGTDEEDRSKRRKRKPV-TANGGRNKLFDLLNDLEGGGGGGLEAIELLGVEKTAHGVGGSSSSMLLEGAAGQEHVVDHVALPPXXXXXXXXXXXXXXXXQE---LLSEPRKKSAGRKFSRRQGRVPPLTRSQSEEWRVLPMAERIQEIRHSKMKKKDPMKEEKCMEVMQMLDKVKEEHGERGLGLTFIYSLGMRTCLDFGQPEKVIALFSELKTFKESPPNRQAFEAASIAHSQLKQGDAAMEVILEMKESGWLPTERAYKTLLETIRGTEGASAVANRVIQLYVEDEDPEGGGAGLLPTSMDLCHQYLMVLAWANEWEQALEFFFKLVERGQPHPDQNCYNAALHALNRSERWEETIRVMEAFRSHVRLMQHQQLEAPKPMRSLFLSALSTLLRVAKRTEGVEGYDEQESEAAMDEAIKVWKELKASGMYEGISPYSAGRLLHPLFNACDKHAKYWPTALEVFDLMESYEYSPDKSDDRWRDEEKASGWRGGDGGISADERMAKEEDRTAPTAGEYRSMLHILSHSRDAERGANWERSMELLREAQENELPISESSFQTVMTDLGFAGEVDLAFSIYDDMRMAGIPPSLDTYNRLLGVCEKNKEWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVINVFNRMKAAGVAPDLRAYNLAIMAHDADENHYGRASLEAELTEAGLSLQDKEWETAWVPPPDLGGAFSEIGEPGYDVGPPRKAG--GGRWGDQGSGGGSSYGQFEDYEG 1124 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.100.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig139.100.2 >prot_P-littoralis_Contig139.100.2 ID=prot_P-littoralis_Contig139.100.2|Name=mRNA_P-littoralis_Contig139.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1137bp ERRRREQQEQHDGVILRAHRRRRPDRMRGACTLLACGWIFQRWGCTDGFTback to top mRNA from alignment at P-littoralis_Contig139:410418..423113+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig139.100.2 ID=mRNA_P-littoralis_Contig139.100.2|Name=mRNA_P-littoralis_Contig139.100.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=12696bp|location=Sequence derived from alignment at P-littoralis_Contig139:410418..423113+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig139:410418..423113+ >mRNA_P-littoralis_Contig139.100.2 ID=mRNA_P-littoralis_Contig139.100.2|Name=mRNA_P-littoralis_Contig139.100.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3411bp|location=Sequence derived from alignment at P-littoralis_Contig139:410418..423113+ (Pylaiella littoralis U1_48)back to top |