prot_P-littoralis_Contig139.100.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig139.100.2
Unique Nameprot_P-littoralis_Contig139.100.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1137
Homology
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BLAST of mRNA_P-littoralis_Contig139.100.2 vs. uniprot
Match: D8LRQ1_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ1_ECTSI)

HSP 1 Score: 717 bits (1852), Expect = 6.100e-238
Identity = 663/1158 (57.25%), Postives = 779/1158 (67.27%), Query Frame = 0 
Query:   27 MRGACTLLACGWIFQRWGCTDGFTGSVWSSSLSAAVTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVASRHSGPLGDHXXXXXXXXXHVSGAALACSQTGATSTLEVQENGGDDTR-LGGAAWVEDVVDEDGE-----DFDDTGPGGNEDETG--DIDRKMGKQRKPMSTSSGGRNKLFDLLNDLEGGGG--CEAIDFLDIG----GVGGVEAGSTRQQQHGEE-VVDLLSLGSRQQHGEGVSAEAEGREEQEGMVPLELLKRTARRKFL---SRLPPLTRSQSEEWRFLPMAERIQEL--GRTGRKDPRRERNWREAMQVLAEVKEEHGERGLGLTFIYGVAMRVCLDFGHPEEVLRLFREVKTLKDSPPNRQMFDSVIVAYCQLKQRDAAVDMLVEMKESGWVPAERSYVKLLNAMRGTEGASAVADRVLRLYADEEDFDADG--LLPRNMDVCFQYLMVLAREQQWEQMLDFFRQLMERSRPPPNENCFGAVLYGLNAAGRWEETVSVMDSFRLR---------QVDKPKRGVYLSALSTLLKVAKRDEL-----EKESEAAMEVAMILWKEFQDWGLYEDIRPESAANLLHSLFTACYKHDKYWPTAMEVFKLLDTYEEEFDR-------DENMSAFRGRGAGADGEKKIDKPEP-VMPTAGEYRSMLLILS--RESARGANWERSLEVLREAQELEYPITEACFQTVITDLGYAGQPDLAFSIQDEMRMAGIPSSVNTYNRLLAVCEKSKNWDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDAANRMEGTGMGWELWRQMGVKGVEPNNYAYSAIITTAAIDRDVRTALRLLEEMKTKEMDIDVVSYTSAICACGPDWLLALDVXXXXXXXXXXXXXXXXXXXXGACFKGEEPREVINVFNRXXXXXXXXXXXXXXXXXMAHDVDENHHGRASLEAELTEAGLSLQDKEWETPWMPPPELEGGYSEIAESTYDVGPPSISGGGGGKWGDRGSGGGG-YGQFDDYEG 1137
            M  ACTLLACG   Q W CTDGF G+ W SS S    +                                      +ASR S                VSGA +ACS+T + STL+VQENGG DT+ LG A W      EDGE     + +  G GG    +G  + DR   ++RKP+ T++GGRNKLFDLLNDLEGGGG   EAI+ L +     GVGG  +    +   G+E VVD ++L                  ++   +  E  K++A RKF     R+PPLTRSQSEEWR LPMAERIQE+   +  +KDP +E    E MQ+L +VKEEHGERGLGLTFIY + MR CLDFG PE+V+ LF E+KT K+SPPNRQ F++  +A+ QLKQ DAA+++++EMKESGW+P ER+Y  LL  +RGTEGASAVA+RV++LY ++ED +  G  LLP +MD+C QYLMVLA   +WEQ L+FF +L+ER +P P++NC+ A L+ LN + RWEET+ VM++FR           +  KP R ++LSALSTLL+VAKR E      E+ESEAAM+ A+ +WKE +  G+YE I P SA  LLH LF AC KH KYWPTA+EVF L+++YE   D+       +E  S +RG   G   ++++ K E    PTAGEYRSML ILS  R++ RGANWERS+E+LREAQE E PI+E+ FQTV+TDLG+AG+ DLAFSI D+MRMAGIP S++TYNRLL VCEK+K W  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                             IDVVSYTSAICACGPDWLLA   XXXXXXXXXXXXXXXXXXXX   FKGEEPREVINVFNR                 MAHD DENH+GRASLEAELTEAGLSLQDKEWET W+PPP+L G +SEI E  YDVGPP  +G  GG+WGD+GSGGG  YGQF+DYEG
Sbjct:    1 MSRACTLLACGVSLQSWVCTDGFAGNAWRSSPSGNKAEKTATHTCVAAPPAEAATAGWQQRRPAAR---------VLASRSS-------------CRRVSGATIACSRTESASTLQVQENGGGDTQQLGDAPW------EDGEGAAADEIEAAGAGGASTPSGTDEEDRSKRRKRKPV-TANGGRNKLFDLLNDLEGGGGGGLEAIELLGVEKTAHGVGGSSSSMLLEGAAGQEHVVDHVALPPXXXXXXXXXXXXXXXXQE---LLSEPRKKSAGRKFSRRQGRVPPLTRSQSEEWRVLPMAERIQEIRHSKMKKKDPMKEEKCMEVMQMLDKVKEEHGERGLGLTFIYSLGMRTCLDFGQPEKVIALFSELKTFKESPPNRQAFEAASIAHSQLKQGDAAMEVILEMKESGWLPTERAYKTLLETIRGTEGASAVANRVIQLYVEDEDPEGGGAGLLPTSMDLCHQYLMVLAWANEWEQALEFFFKLVERGQPHPDQNCYNAALHALNRSERWEETIRVMEAFRSHVRLMQHQQLEAPKPMRSLFLSALSTLLRVAKRTEGVEGYDEQESEAAMDEAIKVWKELKASGMYEGISPYSAGRLLHPLFNACDKHAKYWPTALEVFDLMESYEYSPDKSDDRWRDEEKASGWRGGDGGISADERMAKEEDRTAPTAGEYRSMLHILSHSRDAERGANWERSMELLREAQENELPISESSFQTVMTDLGFAGEVDLAFSIYDDMRMAGIPPSLDTYNRLLGVCEKNKEWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDVVSYTSAICACGPDWLLAXXXXXXXXXXXXXXXXXXXXXXXXXXFKGEEPREVINVFNRMKAAGVAPDLRAYNLAIMAHDADENHYGRASLEAELTEAGLSLQDKEWETAWVPPPDLGGAFSEIGEPGYDVGPPRKAG--GGRWGDQGSGGGSSYGQFEDYEG 1124
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.100.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRQ1_ECTSI6.100e-23857.25Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 803..835
e-value: 9.9E-4
score: 17.1
coord: 391..422
e-value: 1.2E-4
score: 20.0
coord: 837..871
e-value: 1.5E-5
score: 22.9
coord: 733..766
e-value: 2.9E-6
score: 25.1
coord: 1011..1043
e-value: 3.9E-5
score: 21.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 392..419
e-value: 0.043
score: 14.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 928..987
e-value: 1.2E-5
score: 25.3
coord: 717..778
e-value: 3.1E-13
score: 49.6
coord: 825..882
e-value: 3.4E-12
score: 46.3
coord: 996..1051
e-value: 3.7E-8
score: 33.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 10.281757
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 800..834
score: 9.45966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 870..904
score: 9.503505
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 730..764
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 765..799
score: 9.229472
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1008..1042
score: 10.215989
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 835..869
score: 11.838262
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 887..987
e-value: 6.3E-19
score: 70.5
coord: 461..651
e-value: 5.7E-7
score: 31.2
coord: 988..1084
e-value: 2.2E-13
score: 52.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 310..460
e-value: 1.4E-14
score: 56.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 659..779
e-value: 2.3E-20
score: 74.7
coord: 780..886
e-value: 4.3E-28
score: 99.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1092..1137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..202
NoneNo IPR availablePANTHERPTHR47939MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKEcoord: 676..984
coord: 744..1058
coord: 332..527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:410418..423113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.100.2mRNA_P-littoralis_Contig139.100.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig139 410418..423113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig139.100.2 ID=prot_P-littoralis_Contig139.100.2|Name=mRNA_P-littoralis_Contig139.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1137bp
ERRRREQQEQHDGVILRAHRRRRPDRMRGACTLLACGWIFQRWGCTDGFT
GSVWSSSLSAAVTKTAAATTAAAAPATRTPPSSALAGTAAASSAWQRRPL
LAVASRHSGPLGDHHRRFRRRRRHVSGAALACSQTGATSTLEVQENGGDD
TRLGGAAWVEDVVDEDGEDFDDTGPGGNEDETGDIDRKMGKQRKPMSTSS
GGRNKLFDLLNDLEGGGGCEAIDFLDIGGVGGVEAGSTRQQQHGEEVVDL
LSLGSRQQHGEGVSAEAEGREEQEGMVPLELLKRTARRKFLSRLPPLTRS
QSEEWRFLPMAERIQELGRTGRKDPRRERNWREAMQVLAEVKEEHGERGL
GLTFIYGVAMRVCLDFGHPEEVLRLFREVKTLKDSPPNRQMFDSVIVAYC
QLKQRDAAVDMLVEMKESGWVPAERSYVKLLNAMRGTEGASAVADRVLRL
YADEEDFDADGLLPRNMDVCFQYLMVLAREQQWEQMLDFFRQLMERSRPP
PNENCFGAVLYGLNAAGRWEETVSVMDSFRLRQVDKPKRGVYLSALSTLL
KVAKRDELEKESEAAMEVAMILWKEFQDWGLYEDIRPESAANLLHSLFTA
CYKHDKYWPTAMEVFKLLDTYEEEFDRDENMSAFRGRGAGADGEKKIDKP
EPVMPTAGEYRSMLLILSRESARGANWERSLEVLREAQELEYPITEACFQ
TVITDLGYAGQPDLAFSIQDEMRMAGIPSSVNTYNRLLAVCEKSKNWDRA
FKILDEMRKANLKPDIISFGAAISACGKGLEWRRALALLVRMQHDGIMPN
LQCFNAVIHGLGLAREWKRAEAIMEVIRKTGLEPDGYTYNSLAMAYATAG
ESDRALDVLETMENNGVQPDAVTYGTLMKACEGEGAFSIMRSLMDEMDQR
GIPMTVNHYTTCIDAANRMEGTGMGWELWRQMGVKGVEPNNYAYSAIITT
AAIDRDVRTALRLLEEMKTKEMDIDVVSYTSAICACGPDWLLALDVLEDM
AKDGVAPNLLSYTAAMGACFKGEEPREVINVFNRMKEAGVAPDLRAYNLA
MMAHDVDENHHGRASLEAELTEAGLSLQDKEWETPWMPPPELEGGYSEIA
ESTYDVGPPSISGGGGGKWGDRGSGGGGYGQFDDYEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf