mRNA_P-littoralis_Contig1383.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5KZW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW8_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.020e-26 Identity = 79/195 (40.51%), Postives = 110/195 (56.41%), Query Frame = 1
Query: 10 KTPKFTGDFVLFKTMFEAFMASVGLAQTLEITNYP---LRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAV-GVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHADHRL 582
K P +F LFK++FE +A L+ TL P + ++ G PR V +GE V+ +E A YLM A GAN Q +IL G+V AW A F LP+S EQ L L +++ + GEDPK Y L+ D++LS LRAV G D E+L +LRR+LS+++E + +TR LEN VRS +A+ L
Sbjct: 101 KPPVHDSNFPLFKSLFELLLAREDLSHTLAKPASPDQCIWLLNGLPRSENVCLHGERRVSDHEYAFEYLMRARKGANLQARILAVGTVSGAWEAAQQFCLPMSNFEQEALKLSLTNMKMQLGEDPKEYLLRFDRVLSTLRAVNGDAITDREVLAMLRRNLSADYEQVHILFMANSSLTRKNLENLVRSLYAERDL 295
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.390e-24 Identity = 64/172 (37.21%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 10 KTPKFTGDFVLFKTMFEAFMASVGLAQTLEI---TNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLT 516
K P G F+ + F+A GL QTL+ T Y + II P R+ L +G P V A+ RA YL+E+T+G++ + + V EAWT ++LP + AEQ L +QLE + GE+PKL+F +VD I++ +RAVG+ K + +I++ + R LSS++++E++ L+
Sbjct: 384 KHPNEPGKFMSWSRRMRTFLAVEGLEQTLDHQPPTGY-VHIIGCPDRNYLNRIHGAPLVTAHLRAWGYLVESTSGSDIEETLFACSCVPEAWTAIREWSLPTTDAEQRLLERQLETVEMSPGENPKLFFARVDGIVNTMRAVGIEKSERQIVQTIVRQLSSDYDVERKTTLS 554
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5KIP6_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP6_9PHAE) HSP 1 Score: 103 bits (256), Expect = 4.240e-22 Identity = 62/173 (35.84%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 64 FMASVGLAQTLE---ITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHAD 573
F+A L +TL+ T Y + +I R L +G VAA++RA Y++EAT G + + ++ V EAW+ + LP AE+ LV++LE + GEDPKL+F +VD +++ ++AVG+ K + I+ I+ R L+ E++IE++ L P ++R ++EN VR+A+A+
Sbjct: 84 FLAVEDLERTLDHMPSTGY-VNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYAN 255
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5JNE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE4_9PHAE) HSP 1 Score: 103 bits (256), Expect = 4.420e-22 Identity = 62/173 (35.84%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 64 FMASVGLAQTLE---ITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHAD 573
F+A L +TL+ T Y + +I R L +G VAA++RA Y++EAT G + + ++ V EAW+ + LP AE+ LV++LE + GEDPKL+F +VD +++ ++AVG+ K + I+ I+ R L+ E++IE++ L P ++R ++EN VR+A+A+
Sbjct: 139 FLAVEDLERTLDHMPSTGY-VNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYAN 310
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5L4A7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A7_9PHAE) HSP 1 Score: 103 bits (256), Expect = 4.710e-22 Identity = 62/173 (35.84%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 64 FMASVGLAQTLE---ITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHAD 573
F+A L +TL+ T Y + +I R L +G VAA++RA Y++EAT G + + ++ V EAW+ + LP AE+ LV++LE + GEDPKL+F +VD +++ ++AVG+ K + I+ I+ R L+ E++IE++ L P ++R ++EN VR+A+A+
Sbjct: 84 FLAVEDLERTLDHMPSTGY-VNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYAN 255
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5KYI1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI1_9PHAE) HSP 1 Score: 103 bits (256), Expect = 4.990e-22 Identity = 62/173 (35.84%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 64 FMASVGLAQTLE---ITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHAD 573
F+A L +TL+ T Y + +I R L +G VAA++RA Y++EAT G + + ++ V EAW+ + LP AE+ LV++LE + GEDPKL+F +VD +++ ++AVG+ K + I+ I+ R L+ E++IE++ L P ++R ++EN VR+A+A+
Sbjct: 84 FLAVEDLERTLDHMPSTGY-VNVISCLDRTYLNQTHGAHLVAAHQRAWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILADPTISRAKVENVVRAAYAN 255
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.810e-20 Identity = 63/194 (32.47%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 7 RKTPKFTGDFVL-FKTMFEAFMASVGLAQTLEITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHADHRLS 585
R P T D +L ++ F A+M + L T+ + + ++ L YG V ++R ++++EA GA F+ + + SV EAW ++ LP A+ LV +L+++ D EDPKL+F +V Q+ ++LRAVG+ K D E+++IL R L + +++EKR L++ +TR +L++ VR +A + S
Sbjct: 30 RIPPNCTADTLLSWRRRFLAYMDNHDLQHTI-FGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 222
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 4.100e-20 Identity = 62/194 (31.96%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 7 RKTPKFTGD-FVLFKTMFEAFMASVGLAQTLEITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHADHRLS 585
R P T D F+ ++ F A++ + L T+ + + ++ L YG V ++R ++++EA GA F+ + + SV EAW ++ LP A+ LV +L+++ D EDPKL+F +V Q+ ++LRAVG+ K D E+++IL R L + +++EKR L++ +TR +L++ VR +A + S
Sbjct: 30 RIPPNCTADTFLSWRRRFLAYVDNHNLQHTI-FGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 222
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 5.560e-20 Identity = 62/194 (31.96%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 7 RKTPKFTGD-FVLFKTMFEAFMASVGLAQTLEITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHADHRLS 585
R P T D F+ ++ F A++ + L T+ + + ++ L YG V ++R ++++EA GA F+ + + SV EAW ++ LP A+ LV +L+++ D EDPKL+F +V Q+ ++LRAVG+ K D E+++IL R L + +++EKR L++ +TR +L++ VR +A + S
Sbjct: 102 RIPPNCTADTFLSWRRRFLAYVDNHNLQHTI-FGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 5.900e-20 Identity = 62/194 (31.96%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 7 RKTPKFTGD-FVLFKTMFEAFMASVGLAQTLEITNYPLRIIQGPPRHVLVANYGEPAVAANERALNYLMEATAGANFQVKILTAGSVEEAWTEALNFNLPVSKAEQNDLVKQLEDLRHEDGEDPKLYFLKVDQILSRLRAVGVHKCDAEILEILRRDLSSEFEIEKRGRLTQPRMTRLQLENKVRSAHADHRLS 585
R P T D F+ ++ F A++ + L T+ + + ++ L YG V ++R ++++EA GA F+ + + SV EAW ++ LP A+ LV +L+++ D EDPKL+F +V Q+ ++LRAVG+ K D E+++IL R L + +++EKR L++ +TR +L++ VR +A + S
Sbjct: 102 RIPPNCTADTFLSWRRRFLAYVDNHNLQHTI-FGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1383.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1383.1.1 >prot_P-littoralis_Contig1383.1.1 ID=prot_P-littoralis_Contig1383.1.1|Name=mRNA_P-littoralis_Contig1383.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=199bp SARKTPKFTGDFVLFKTMFEAFMASVGLAQTLEITNYPLRIIQGPPRHVLback to top mRNA from alignment at P-littoralis_Contig1383:9440..10036- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1383.1.1 ID=mRNA_P-littoralis_Contig1383.1.1|Name=mRNA_P-littoralis_Contig1383.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=597bp|location=Sequence derived from alignment at P-littoralis_Contig1383:9440..10036- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1383:9440..10036- >mRNA_P-littoralis_Contig1383.1.1 ID=mRNA_P-littoralis_Contig1383.1.1|Name=mRNA_P-littoralis_Contig1383.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=597bp|location=Sequence derived from alignment at P-littoralis_Contig1383:9440..10036- (Pylaiella littoralis U1_48)back to top |