mRNA_P-littoralis_Contig1378.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: D8LH37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH37_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.320e-63 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLEDRRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDVVGFYAKVMGRRGARPTIHSILHVTDTIREHGE 420
M+Q LYP GT +LKDIV+NYSSLTGSDKWTLQSIM LVFRPVL ++ MKRQ++ DL ++WGT KVL+VL+ L+Q SHLS+AVRAPS+N EL LDLLARDVVGFY+KVMGR G+RPTIHSILH T+ IR HGE
Sbjct: 1 MSQTPSLLYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVLVMKKNMKRQDVNDLREMWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVVGFYSKVMGRTGSRPTIHSILHTTEAIRAHGE 140
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.220e-52 Identity = 95/143 (66.43%), Postives = 113/143 (79.02%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLED----RRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDVVGFYAKVMGRRGARPTIHSILHVTDTIREHG 417
+AQ LYP GT +LKDIV NYSSLTGSDKWTLQSIM LVFRPVL + ++ MKRQ++ +L D+WGT EKVL+VL+ LI+ SHLS AVRAPS+N LEL LDLLARDVVG Y+KV+GR G+RPTIHS+LH + IR HG
Sbjct: 558 VAQNPSLLYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVFRPVLANVGAMKKNMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLDLLARDVVGVYSKVLGRTGSRPTIHSVLHTSQAIRAHG 700
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE) HSP 1 Score: 164 bits (416), Expect = 3.740e-48 Identity = 87/140 (62.14%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLEDRRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDVVGFYAKVMGRRGARPTIHSILHVTDTIREHGE 420
MAQ+ LYPPGT +LKDIV NY+SLTGSDKWTLQSIM LVFR VL++ M R E+ DL WGT+E VL+ LR L++ S LS A+RAPS+ EL LD LARD VG + K+MGR G+RPTIHSILH + IR HGE
Sbjct: 115 MAQKPPLLYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVFRMVLQNVPAMTR-EINDLKAEWGTYEDVLEALRELLKRASLLSIALRAPSFTEPELLQLDKLARDAVGAFFKIMGRTGSRPTIHSILHTVEAIRLHGE 253
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 165 bits (418), Expect = 8.210e-45 Identity = 88/145 (60.69%), Postives = 108/145 (74.48%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLED----RRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDV--VGFYAKVMGRRGARPTIHSILHVTDTIREHG 417
MAQ++ LYPPGT++LKDI+ +Y SLTGSDKWTLQSIM LVFR VL+D RR MK++++ WGT+E VLD LR LIQ S LSFA+RAPSYN EL LD LARD VG ++++MGR G+RPTIHS+LH + IR HG
Sbjct: 283 MAQKSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARDAPGVGAFSQMMGRTGSRPTIHSMLHAVEAIRLHG 427
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.900e-43 Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLED----RRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDVVGFYAKVMGRRGARPTIHSILHVTDTIREHG 417
MAQ+ LYPPGT ++KDIV NY+SLTGSDKWTLQSIM LVFR VL++ RR M +E+ L WGT+E +L+ LR L+ S LSFA+RAPS+ EL LD LARD V ++K+MGR G+RPTIHSILH +TIR HG
Sbjct: 851 MAQKPSLLYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAMRRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAVEAFSKIMGRTGSRPTIHSILHTVETIRLHG 993
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5JWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD2_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.010e-42 Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLEDRRCMK----RQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDVV 327
M+Q LYP GT +LKDIV+NYSSLTGSDKWTLQSIM LVFRPVL+D R MK RQ++ DL +IWGT KVL+VL+ L+Q SHLS+AVRAPS+N EL LDLLARDVV
Sbjct: 45 MSQTPSLLYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVLQDVRAMKKNMKRQDINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 157
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI) HSP 1 Score: 144 bits (363), Expect = 3.250e-38 Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLEDRRCMK----RQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARDVV 327
M+Q LYP GT +LKD+V+NYSSLTGSDKWTLQSIM LVFRPV +D R MK RQ + DL +IWGT KVL+VL+ L+Q SHLS+AVRAPS+N EL LDLLARDVV
Sbjct: 375 MSQTPSLLYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQDFRAMKKNMKRQNINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 487
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5KBT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT3_9PHAE) HSP 1 Score: 124 bits (312), Expect = 3.640e-34 Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLED----RRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARD 321
MAQ+ LYPPGT +LKD+V NY+SL GSDKWTLQSI+ L+FR VL+D RR M +E+ DL+ WGT++KVL+ LR L++ S LSFA+RAPS+ EL LD LA D
Sbjct: 14 MAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMMTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLAHD 124
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5KDY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY2_9PHAE) HSP 1 Score: 129 bits (323), Expect = 3.900e-34 Identity = 66/111 (59.46%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLED----RRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARD 321
MAQ+ LYPPGT +LKD+V NY+SL GSDKWTLQSI+ L+FR VL+D RR MK +E+ DL+ WGT++KVL+ LR L++ S LSFA+RAPS+ EL LD LARD
Sbjct: 144 MAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 254
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE) HSP 1 Score: 129 bits (323), Expect = 9.970e-33 Identity = 66/111 (59.46%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 1 MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLED----RRCMKRQELTDLLDIWGTWEKVLDVLRGLIQARSHLSFAVRAPSYNGLELENLDLLARD 321
MAQ+ LYPPGT +LKD+V NY+SL GSDKWTLQSI+ L+FR VL+D RR MK +E+ DL+ WGT++KVL+ LR L++ S LSFA+RAPS+ EL LD LARD
Sbjct: 331 MAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 441 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1378.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1378.12.1 >prot_P-littoralis_Contig1378.12.1 ID=prot_P-littoralis_Contig1378.12.1|Name=mRNA_P-littoralis_Contig1378.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp MAQEAGQLYPPGTNQLKDIVANYSSLTGSDKWTLQSIMFLVFRPVLEDRRback to top mRNA from alignment at P-littoralis_Contig1378:23204..24469+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1378.12.1 ID=mRNA_P-littoralis_Contig1378.12.1|Name=mRNA_P-littoralis_Contig1378.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1266bp|location=Sequence derived from alignment at P-littoralis_Contig1378:23204..24469+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1378:23204..24469+ >mRNA_P-littoralis_Contig1378.12.1 ID=mRNA_P-littoralis_Contig1378.12.1|Name=mRNA_P-littoralis_Contig1378.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=420bp|location=Sequence derived from alignment at P-littoralis_Contig1378:23204..24469+ (Pylaiella littoralis U1_48)back to top |