mRNA_P-littoralis_Contig1366.11.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1366.11.1
Unique NamemRNA_P-littoralis_Contig1366.11.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 1.270e-94
Identity = 162/298 (54.36%), Postives = 206/298 (69.13%), Query Frame = 3
Query:  249 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
            ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P ANW S SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAERRA+AKREG RL+  NR G K+ KK  R QSVA+AT  A+ +A+  + PLL     + +  R + ++ E +        AE  L       H+  S+++ EE++K   G   R KFM + +  LEK M
Sbjct:   39 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLLPRGGSEESEWRLKQEEEESKSAVLDTKAAEYALQKAMCADHQKCSEQIVEEKEKKRPGYQTRVKFMEQMVAMLEKEM 335          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 4.910e-94
Identity = 187/379 (49.34%), Postives = 243/379 (64.12%), Query Frame = 3
Query:    6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
            +L  R  + +V + R+ + PF     +Y+VADL+  M+ E+  E     GG             XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW S SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN  LP D QREDDGTG   G  GGAERRASAKREG RL   NR G K+ KK    Q+VA+AT  A+ +A+  + PLL+    + +  R + ++ E + A +        L       H+ +S+++ EEE +   G   R KFM + +  LEK M
Sbjct:  123 LLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLLSRGGSEKSEWRLKQEEEESKSAALDTKAAAYALQKAMCADHQKYSEQIVEEEGQKRPGYQTRVKFMEQMVAKLEKEM 493          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 3.760e-91
Identity = 175/302 (57.95%), Postives = 212/302 (70.20%), Query Frame = 3
Query:    6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 911
            +L  R  + +V + R+S+ PF+    EY+VADL+  +  ED  EA                   XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+E+W   + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+A+W S SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDDGTG      GGA+RRA+AKREG RLH  NR GKK+  K    QSVA+AT  A+ +AI  M PLL
Sbjct:   97 LLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 9.220e-91
Identity = 190/380 (50.00%), Postives = 245/380 (64.47%), Query Frame = 3
Query:    6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL----ASMKPDTANGRPQ----TDDPERQVAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
            +L  R  + +V + R+S  PFK    EY+  DL+  +  ED  EA                   XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+++W   + RF DPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+ANW S SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDDGTG      GGA+RRA+AKREG RL+  NR GKK   K    QSVA+AT  A+ +A+  + PLL     S K +    + +    T + + + + + L  E   +H  +SKK+ EEEK+   G   R +F+R+ +  +EK M
Sbjct:  332 LLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKED--EAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLLEKVGGSEKSEWYKKKEEHACKTAEHDSKASGLALQKEMTESHAEFSKKIVEEEKEKADGYQTRVRFLRKMLAGIEKEM 708          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 2.600e-88
Identity = 183/369 (49.59%), Postives = 237/369 (64.23%), Query Frame = 3
Query:    6 VLALRATLTLVRVDRNSSTPFKFGPREYN-VADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFM 1088
            +L  R  + +V + R+S+ PF     +Y+ VADL+  M+ ED  E         +S         XXXXXXXXXXXX     ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR  VD E+V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW   SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAER A+AKREG RL+  NR G  + KK  R QSVA+AT  A+ +A+  + PLL     + +  R + +  E +        AE  L       H+ +S+++ EE++K   G   R KFM
Sbjct:  128 LLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLLPLGGSEKSEWRLKQEVEESKSAALDTKAAEYALQKAMCADHQKYSEQIVEEKEKKRPGYQTRVKFM 488          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 8.620e-86
Identity = 168/302 (55.63%), Postives = 207/302 (68.54%), Query Frame = 3
Query:    6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 911
            +L  R  + +V + R+ + PF     +Y+V DL+  M+ E+  E     GG             XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW S SGNNQPW++F QGD+D +++G AI+KYPELDQVCN  LP D QREDDGTG   G  GGAERRASAKREG RL   NR G K+ KK    QSVA+AT  A+ +A+  + PLL
Sbjct:  285 LLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 1.600e-84
Identity = 161/272 (59.19%), Postives = 193/272 (70.96%), Query Frame = 3
Query:    6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 821
            +L  R  + +V + R+S+ PF+    EY+VADL+  +  ED  EA                   XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+E+W   + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+ANW S SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDD TG      GGA+RRA+AKREG RLH  NR GKK
Sbjct:  220 LLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.860e-78
Identity = 169/375 (45.07%), Postives = 222/375 (59.20%), Query Frame = 3
Query:   18 RATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
            R  + +V + R+ + P      +Y+VADL+  M+ ED  E         +S         XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H   N+I QPNISAEK++ M +  KAKWN P+ANW S  GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG   G                  +  NR G K+ KK  R QSVA+AT  A+ +A+  + PLL     + +  R + ++ E +        AE  L  E    H+ +S+++ EE++    G   R KFM +    LEK M
Sbjct:    3 RGVVNMVALARDRTEPVTVEGVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLLPRGGSEKSEWRLKQEEEESKSAALDTKAAEYALQKEMRADHQKFSEQIVEEKENKRPGDQTRVKFMEQMEAKLEKEM 355          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 4.360e-74
Identity = 133/211 (63.03%), Postives = 162/211 (76.78%), Query Frame = 3
Query:  249 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWS-STSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 878
            ERKGPHCMMRL GIL ED +RP +I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E  +H +PN+I QP+I AEK++K W+  KAKWN P+ANW  S SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAERRA+AKREG RL+  NR G K+ K+  R QSVA+AT  A+
Sbjct:  733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942          
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 1.380e-73
Identity = 169/375 (45.07%), Postives = 227/375 (60.53%), Query Frame = 3
Query:   18 RATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
            R  + +V   R+S+ PF F   +Y+VA+LF  M+ ED  E     GGS+ +G  GS    XXXXXXXXXXXX     ERKGPH MMRLVGI  ED + PL I+SR+QA R +LD SAV  R+ +W   ++RF D  H VR+IVD   V+H +PN+I QPN SAEK++  W+  +A WN P+ANW+S SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG      GGAERR +AKREG RL   N             +SVA+A   A+ +A+  + PLL     + +  + +  + + + A +        L       H+ +S+++ EEE+K   G   R   + + +  LEK M
Sbjct:  260 RGVVNMVAQARDSTEPFIFEDVDYSVANLFDAME-EDKPELGDSAGGSAPNG--GSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLLPRGGSEKSERQLKQQEEQSKSAALDTKAAAYALQKAMCADHQKYSEQVVEEEEKKRPGYQARINVVEQMVAKLEKEM 630          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXZ6_9PHAE1.270e-9454.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZX9_9PHAE4.910e-9449.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FJ39_ECTSI3.760e-9157.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKV3_9PHAE9.220e-9150.00Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KNY9_9PHAE2.600e-8849.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFU0_9PHAE8.620e-8655.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU69_ECTSI1.600e-8459.19Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KQ52_9PHAE1.860e-7845.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNM0_9PHAE4.360e-7463.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN7_9PHAE1.380e-7345.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1366contigP-littoralis_Contig1366:18611..21494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIC6
Model size1361
Max annot lvl2880.D7FIC6|-
Hectar predicted targeting categoryother localisation
Exons3
Evalue7e-97
EggNOG OGs2EJXG@1|root,2SPZB@2759|Eukaryota
Cds size1023
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789631.5266385-UTR-P-littoralis_Contig1366:18610..187231680789631.5266385-UTR-P-littoralis_Contig1366:18610..18723Pylaiella littoralis U1_48UTRP-littoralis_Contig1366 18611..18723 +
1680789631.5653937-UTR-P-littoralis_Contig1366:21269..214941680789631.5653937-UTR-P-littoralis_Contig1366:21269..21494Pylaiella littoralis U1_48UTRP-littoralis_Contig1366 21270..21494 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789631.537607-CDS-P-littoralis_Contig1366:18723..190411680789631.537607-CDS-P-littoralis_Contig1366:18723..19041Pylaiella littoralis U1_48CDSP-littoralis_Contig1366 18724..19041 +
1680789631.5476923-CDS-P-littoralis_Contig1366:19305..194891680789631.5476923-CDS-P-littoralis_Contig1366:19305..19489Pylaiella littoralis U1_48CDSP-littoralis_Contig1366 19306..19489 +
1680789631.5567274-CDS-P-littoralis_Contig1366:20748..212691680789631.5567274-CDS-P-littoralis_Contig1366:20748..21269Pylaiella littoralis U1_48CDSP-littoralis_Contig1366 20749..21269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1366.11.1prot_P-littoralis_Contig1366.11.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1366 18724..21269 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1366.11.1

>prot_P-littoralis_Contig1366.11.1 ID=prot_P-littoralis_Contig1366.11.1|Name=mRNA_P-littoralis_Contig1366.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp
MDAEDAVEAAAEGGGSSESGATGSCGGTAAGAGGGGAAGAGVGTAERKGP
HCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERF
TDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHA
NWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQRE
DDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADA
TEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEIVLADECMTAH
ENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRMAAMK*
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mRNA from alignment at P-littoralis_Contig1366:18611..21494+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1366.11.1 ID=mRNA_P-littoralis_Contig1366.11.1|Name=mRNA_P-littoralis_Contig1366.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2884bp|location=Sequence derived from alignment at P-littoralis_Contig1366:18611..21494+ (Pylaiella littoralis U1_48)
AGGTAGTTCTCGCGCTCCGGGCCACGTTGACGCTGGTTCGCGTCGACCGC AACTCGAGTACGCCCTTCAAGTTCGGGCCGAGAGAGTACAACGTAGCCGA CCTCTTCGCCATCATGGACGCCGAAGACGCCGTCGAGGCTGCGGCAGAGG GCGGAGGAAGTTCCGAGAGTGGTGCCACCGGGTCGTGCGGCGGCACTGCT GCGGGGGCGGGGGGTGGCGGCGCCGCTGGAGCGGGGGTTGGCACCGCGGA GCGGAAAGGGCCGCACTGCATGATGCGGCTCGTCGGCATTCTCGTAGAGG ACGACGTTCGCCCGCTGCTCATAGACAGTCGGCTTCAGGCGAATCGTGCT CAGCTTGATGCCTCTGCGGTGGGATCACGCAGCGAAGTGTGGCAAGTCGC CTCGGAACGCTTCACGGACCCTGACCACGAGGTAACACCAGTGGAGGGGG AACACCCCCTCCGCCGGTAGTGACGATGGCATGAATATGTGATGTACCAA CTTGTTTTATTGCGCTGCACCCAGTAAGCCGTGTGTATACATTGTTTTGT TTTCATCACAGCGGTTCCAGGGGCAGGTCTGACCCCGGTTGGTCATCGGC ACCCAGATTCGTGTAGCACAGACACACGCGAAATTTCGCCCGCACCATGT ACCTGATACCTCTCCCTCTTCAACCGATCGCTCCCGACTCTTAAGGTGCG ACGGATCGTCGACCACGAGATGGTCGCCCACTGCGATCCCAACGTAATCC ACCAACCGAACATTTCCGCGGAAAAGCTCTCCAAAATGTGGGCGGGGGTG AAGGCGAAGTGGAATCAGCCCCACGCAAACTGGAGTAGCACGTCTGGCAA CAATCAGCCTTGGGTGAACTTCTGCCAAGGTAAGAATGCCGTTCGAGAGT GGGAGGGAAACTCACATGCGTAGATTAAACGTTGTAAAGGGGCCTTCGGC ATCAACTGTTCAGCGTGTCAATTTTCTTGTCGGCCGTAGGCGAGACGCTG CCTTACCGGTCTTGTTTAGGTGATTCGATTCTGCACCGGTTCGTTTGTGT TTCTCATTTCACCTTGTACTTCGGGTGCAAGGGAACAAGTTGGGCTCACC ATCCGGGTTTAGACGATCGTAAGGTCAACAAACGTTTTTTTGCAAGGGTG TACATAGACTGCTGCCGGGCCGATTGTTCCCGGATTTTGACGGAAGTGCT GGTGATTCCGGCCCGTCCCGGCAAAAACATAAAAATAACCGGCCCGTCCC GGCCCCCGGAAAGAAAATAAAAAAACATTATACCCGCCCGTCCCGGCACA TGAGAAAAAAAAAACGGCCCGGCCCGGCGCGTGAAAAAAGAACGTCCATT CCCGGCACGTGAAAAAAAAAACGTCCGCCCGGCCCGGCAAGTGGACACAA AATTACCGCTCTATCCCGGCCATGTGAATACAAAAACTACAGAATACTCG CGGTAAAGGCACAATGCAAAAAACAACAATTTGCGTGCGATTGGTCACAC CCTCGTCGTATCCAGTATACACTCCGCAAATGTCCGGGCCCATACAACCA CCCCGTGTCCCGGTGCTGAAAATGAAAACTACCGGCCCGTCCCGGCACGT GAAAGCAAAAACTACTGGCTCGTCCCGGCACGTGAAAACAAAAACAACCG GCCCGGCCCGGCACGTGAAAACAAAAAATCGGCTCGGCCCGGGTGGAATA TTCCCGGCAAAACTACCGTCCCGGCAAGAATTAAAACCAAGTTTTGGCAC TCCGGCGCTACCGTTTTTTTTTTTTTTGTCGTCCACCCGAATTCTCCTCC CGGCCCGGCAAATTCCAATTTTAGCAGGCCATGTACACCCTTGCTTTTTT GTTCACCTTCCTCGTGCGGTGCTCGCCAATGACCTCGTTTCCCCTCACGG TTAATTCTGTGAGCTTAAACCCCCCTTCATCAGCATTCGACCTCCTGACC TAGCTGTAACATCTAATCGAGGTTACCGACTAAACAACCGGGGCGGCTCT GGGTGCATTTGAATCTTGGAAAATTTCAGCACATGTAGACGTACATGGGG TGAGGCGTAGTTCTGACGAATAGCCTGTGCGCTATGCTTGGCCCCTGCTG CCTGCCCCCCCCCCCCCCTCCCCGCTTTGACCGTCCAGGCGATTCCGACA TTTTCCTCGTCGGTGAAGCTATTAAAAAGTACCCCGAATTAGACCAGGTG TGCAACGCGCTATTACCAGAAGACGTCCAGCGAGAAGACGACGGGACCGG AGCAGCAGCTGGGGAGGCGGGCGGCGCGGAACGCAGGGCGTCAGCCAAGC GCGAGGGCGAGCGGCTACACGGTATGAACCGTGCCGGCAAGAAGAAGGCT AAAAAGGACGAGAGGGCGCAGAGCGTGGCCGACGCTACGGAGAAGGCCGT GAGTTCGGCCATTGCGGGGATGGCACCGTTGCTGGCATCGATGAAGCCGG ACACCGCAAACGGGCGTCCCCAAACTGATGATCCGGAGCGCCAGGTTGCA GAAATCGTCCTCGCCGACGAATGCATGACCGCCCATGAAAATTGGTCGAA GAAACTCGCGGAAGAAGAGAAGAAAGGAGAGAGGGGGAGCGTCTTTCGGA AGAAATTTATGAGGGAAAGGATAGAAAGTCTTGAGAAGAGAATGGCTGCA ATGAAATAGGCATTTCCACGCAAGACGATTTATGGTAGCGTAGAGTTCAA ATGACAAGCGCGACCTGTCGTTCATTACCAAAAGGTGTTGTTGAACGAGT GGAATGTCTGTGGGGTTGGTGTTACTCCTGTTGCTTGCGCAGCCGGGTGT GAGTACAGCACAGAATCAGTTTTGAAGTTGTTTCTGCTTTTTTCATTACG TCGTCGAGGTGAGCCGAGGGTTGGCGGGAGGCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1366:18611..21494+

>mRNA_P-littoralis_Contig1366.11.1 ID=mRNA_P-littoralis_Contig1366.11.1|Name=mRNA_P-littoralis_Contig1366.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig1366:18611..21494+ (Pylaiella littoralis U1_48)
ATGGACGCCGAAGACGCCGTCGAGGCTGCGGCAGAGGGCGGAGGAAGTTC
CGAGAGTGGTGCCACCGGGTCGTGCGGCGGCACTGCTGCGGGGGCGGGGG
GTGGCGGCGCCGCTGGAGCGGGGGTTGGCACCGCGGAGCGGAAAGGGCCG
CACTGCATGATGCGGCTCGTCGGCATTCTCGTAGAGGACGACGTTCGCCC
GCTGCTCATAGACAGTCGGCTTCAGGCGAATCGTGCTCAGCTTGATGCCT
CTGCGGTGGGATCACGCAGCGAAGTGTGGCAAGTCGCCTCGGAACGCTTC
ACGGACCCTGACCACGAGGTGCGACGGATCGTCGACCACGAGATGGTCGC
CCACTGCGATCCCAACGTAATCCACCAACCGAACATTTCCGCGGAAAAGC
TCTCCAAAATGTGGGCGGGGGTGAAGGCGAAGTGGAATCAGCCCCACGCA
AACTGGAGTAGCACGTCTGGCAACAATCAGCCTTGGGTGAACTTCTGCCA
AGGCGATTCCGACATTTTCCTCGTCGGTGAAGCTATTAAAAAGTACCCCG
AATTAGACCAGGTGTGCAACGCGCTATTACCAGAAGACGTCCAGCGAGAA
GACGACGGGACCGGAGCAGCAGCTGGGGAGGCGGGCGGCGCGGAACGCAG
GGCGTCAGCCAAGCGCGAGGGCGAGCGGCTACACGGTATGAACCGTGCCG
GCAAGAAGAAGGCTAAAAAGGACGAGAGGGCGCAGAGCGTGGCCGACGCT
ACGGAGAAGGCCGTGAGTTCGGCCATTGCGGGGATGGCACCGTTGCTGGC
ATCGATGAAGCCGGACACCGCAAACGGGCGTCCCCAAACTGATGATCCGG
AGCGCCAGGTTGCAGAAATCGTCCTCGCCGACGAATGCATGACCGCCCAT
GAAAATTGGTCGAAGAAACTCGCGGAAGAAGAGAAGAAAGGAGAGAGGGG
GAGCGTCTTTCGGAAGAAATTTATGAGGGAAAGGATAGAAAGTCTTGAGA
AGAGAATGGCTGCAATGAAATAG
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