mRNA_P-littoralis_Contig1366.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 298 bits (762), Expect = 1.270e-94 Identity = 162/298 (54.36%), Postives = 206/298 (69.13%), Query Frame = 3
Query: 249 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P ANW S SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ KK R QSVA+AT A+ +A+ + PLL + + R + ++ E + AE L H+ S+++ EE++K G R KFM + + LEK M
Sbjct: 39 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLLPRGGSEESEWRLKQEEEESKSAVLDTKAAEYALQKAMCADHQKCSEQIVEEKEKKRPGYQTRVKFMEQMVAMLEKEM 335
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 301 bits (772), Expect = 4.910e-94 Identity = 187/379 (49.34%), Postives = 243/379 (64.12%), Query Frame = 3
Query: 6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
+L R + +V + R+ + PF +Y+VADL+ M+ E+ E GG XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW S SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK Q+VA+AT A+ +A+ + PLL+ + + R + ++ E + A + L H+ +S+++ EEE + G R KFM + + LEK M
Sbjct: 123 LLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLLSRGGSEKSEWRLKQEEEESKSAALDTKAAAYALQKAMCADHQKYSEQIVEEEGQKRPGYQTRVKFMEQMVAKLEKEM 493
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 291 bits (746), Expect = 3.760e-91 Identity = 175/302 (57.95%), Postives = 212/302 (70.20%), Query Frame = 3
Query: 6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 911
+L R + +V + R+S+ PF+ EY+VADL+ + ED EA XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+A+W S SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RLH NR GKK+ K QSVA+AT A+ +AI M PLL
Sbjct: 97 LLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 299 bits (766), Expect = 9.220e-91 Identity = 190/380 (50.00%), Postives = 245/380 (64.47%), Query Frame = 3
Query: 6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL----ASMKPDTANGRPQ----TDDPERQVAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
+L R + +V + R+S PFK EY+ DL+ + ED EA XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+++W + RF DPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW S SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RL+ NR GKK K QSVA+AT A+ +A+ + PLL S K + + + T + + + + + L E +H +SKK+ EEEK+ G R +F+R+ + +EK M
Sbjct: 332 LLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKED--EAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLLEKVGGSEKSEWYKKKEEHACKTAEHDSKASGLALQKEMTESHAEFSKKIVEEEKEKADGYQTRVRFLRKMLAGIEKEM 708
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 286 bits (733), Expect = 2.600e-88 Identity = 183/369 (49.59%), Postives = 237/369 (64.23%), Query Frame = 3
Query: 6 VLALRATLTLVRVDRNSSTPFKFGPREYN-VADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFM 1088
+L R + +V + R+S+ PF +Y+ VADL+ M+ ED E +S XXXXXXXXXXXX ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR VD E+V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAER A+AKREG RL+ NR G + KK R QSVA+AT A+ +A+ + PLL + + R + + E + AE L H+ +S+++ EE++K G R KFM
Sbjct: 128 LLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLLPLGGSEKSEWRLKQEVEESKSAALDTKAAEYALQKAMCADHQKYSEQIVEEKEKKRPGYQTRVKFM 488
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 284 bits (726), Expect = 8.620e-86 Identity = 168/302 (55.63%), Postives = 207/302 (68.54%), Query Frame = 3
Query: 6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 911
+L R + +V + R+ + PF +Y+V DL+ M+ E+ E GG XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW S SGNNQPW++F QGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK QSVA+AT A+ +A+ + PLL
Sbjct: 285 LLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 277 bits (709), Expect = 1.600e-84 Identity = 161/272 (59.19%), Postives = 193/272 (70.96%), Query Frame = 3
Query: 6 VLALRATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 821
+L R + +V + R+S+ PF+ EY+VADL+ + ED EA XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW S SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDD TG GGA+RRA+AKREG RLH NR GKK
Sbjct: 220 LLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 257 bits (656), Expect = 1.860e-78 Identity = 169/375 (45.07%), Postives = 222/375 (59.20%), Query Frame = 3
Query: 18 RATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
R + +V + R+ + P +Y+VADL+ M+ ED E +S XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H N+I QPNISAEK++ M + KAKWN P+ANW S GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG G + NR G K+ KK R QSVA+AT A+ +A+ + PLL + + R + ++ E + AE L E H+ +S+++ EE++ G R KFM + LEK M
Sbjct: 3 RGVVNMVALARDRTEPVTVEGVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLLPRGGSEKSEWRLKQEEEESKSAALDTKAAEYALQKEMRADHQKFSEQIVEEKENKRPGDQTRVKFMEQMEAKLEKEM 355
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 259 bits (663), Expect = 4.360e-74 Identity = 133/211 (63.03%), Postives = 162/211 (76.78%), Query Frame = 3
Query: 249 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWS-STSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 878
ERKGPHCMMRL GIL ED +RP +I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E +H +PN+I QP+I AEK++K W+ KAKWN P+ANW S SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ K+ R QSVA+AT A+
Sbjct: 733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 253 bits (645), Expect = 1.380e-73 Identity = 169/375 (45.07%), Postives = 227/375 (60.53%), Query Frame = 3
Query: 18 RATLTLVRVDRNSSTPFKFGPREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKKLAEEEKKGERGSVFRKKFMRERIESLEKRM 1121
R + +V R+S+ PF F +Y+VA+LF M+ ED E GGS+ +G GS XXXXXXXXXXXX ERKGPH MMRLVGI ED + PL I+SR+QA R +LD SAV R+ +W ++RF D H VR+IVD V+H +PN+I QPN SAEK++ W+ +A WN P+ANW+S SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG GGAERR +AKREG RL N +SVA+A A+ +A+ + PLL + + + + + + + A + L H+ +S+++ EEE+K G R + + + LEK M
Sbjct: 260 RGVVNMVAQARDSTEPFIFEDVDYSVANLFDAME-EDKPELGDSAGGSAPNG--GSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLLPRGGSEKSERQLKQQEEQSKSAALDTKAAAYALQKAMCADHQKYSEQVVEEEEKKRPGYQARINVVEQMVAKLEKEM 630 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1366.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1366.11.1 >prot_P-littoralis_Contig1366.11.1 ID=prot_P-littoralis_Contig1366.11.1|Name=mRNA_P-littoralis_Contig1366.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp MDAEDAVEAAAEGGGSSESGATGSCGGTAAGAGGGGAAGAGVGTAERKGPback to top mRNA from alignment at P-littoralis_Contig1366:18611..21494+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1366.11.1 ID=mRNA_P-littoralis_Contig1366.11.1|Name=mRNA_P-littoralis_Contig1366.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2884bp|location=Sequence derived from alignment at P-littoralis_Contig1366:18611..21494+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1366:18611..21494+ >mRNA_P-littoralis_Contig1366.11.1 ID=mRNA_P-littoralis_Contig1366.11.1|Name=mRNA_P-littoralis_Contig1366.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig1366:18611..21494+ (Pylaiella littoralis U1_48)back to top |