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Homology
BLAST of mRNA_P-littoralis_Contig136.77.3 vs. uniprot
Match: A0A6H5JJ43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ43_9PHAE) HSP 1 Score: 384 bits (987), Expect = 3.740e-118 Identity = 312/760 (41.05%), Postives = 373/760 (49.08%), Query Frame = 3
Query: 177 DNNAFVIRLLRVFLGAAVRDXXXXXXXXPDLPSHHSSSRTSCGRRVQCAPSSLPATAA-APTTVASEQAEKVQPA--------QNIAKCEESPGPTAQQGATKGKTDIAAAAAEASATVDAREQAGCTLWDMSADERHASAMCSAGLVAVSCAVLGYCAGAAATAQLRALAVAKEEPDGSAVTKLPVILVTAAEPVEAPKAPDTALSAPSGGQEVERLREIACGLLANACSHRSLRQQIAGDPPLGEELLLAFHCTDDSASLTELLRLFSTAALM---------------------------------------------------------------------------------PTAG-----------------------------------------GLSSGLAAKDTLERLAFILENSLEEKLLARACSLAYSLMYKHGDAVIRPLVEAFRLEESLAALLNFRSTDLAYEKLGGKETGFDVLLRCLEVLSTSEYSCIGPSPPAAVALPPAVKNXXXXXXXXXXXXXXXXXXEVKGGCASALQYVENHXXXXXXXXXRTRKKTGAGEEDNLIDPAKGNDRTTAVVE-GVTTTKTQ-AMSKSDKRGSVIRGMVAALVPWEHSRQTQRAALLVLGNVLDNCLDGGPDAPSEGVKDGKYADRSASESCAEDLDKALVTSATGGQGEWANEEXXXXXXXXEVVGVDRLAKRRREFLQSVNNLVSGGDSTAAAAVADEGDGLGEELHEAVEAVRKVLEIAG 2057
D A +IRLLR+FLGAAV D PS S+ AP LPAT+ AP S K P +N K P Q + +TD+A+ DAREQAGC LWDMSADE +A AMCSAGLVAVSCAVL CA +A + A A A+ S+ + PV AA V AP PD ++VERLRE+ CGLLAN SHRSLRQQIAGD LG+ELL AFH TDD A LTELLRLFSTAAL+ P AG GL+SG+AA++TLERLAF L+NSLEE+LLA ACSL YSLMY+HGDAVIRPL+E F LEESL +LL RS DLAYEKLGG ETGFD LLRCLEVL+TSE S +GP A A PP V + AL + RK+ EE P G A E T+KT+ ++S+ + RG VIRG+V+AL PWEHSR +QRAALLVLGN+L+N ++ DA + G R ASESCA +LD+ L A GG GEWA ++ V R+ K RREF++SV+NLV D AA +E DGLGE+L EAVEA+RK+LE +G
Sbjct: 7 DEKASIIRLLRIFLGAAVGDEDHENTPLSAPPSLPDSTS---------APP-LPATSPKAPPRAESPLTGKPDPCLPGGDRLERNSPKLLGQPRKP--QRTAESETDMAS-------VPDAREQAGCALWDMSADEGNAFAMCSAGLVAVSCAVLRQCA----SAIVSAAAEARAGGLSSSKSLAPVEAKEAAMAV-APPLPDRE-------EQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLGAFHSTDDPACLTELLRLFSTAALIKSTESAYATKAMNEDNGDAQVAGSTNDPVGDGRAATTALPETNLSGDIHGEGQTAAGALRMVAGAAGAAEAALGAVEISSKPAAGENRTAVTLVTRERNEAEATAVPASEPNTAGAALAMAAWGSAGLASGIAAEETLERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLCSLLQSRSGDLAYEKLGGTETGFDALLRCLEVLTTSEVSGVGPPSSPAAAEPPVVVDPP------------------------ALAQDSGELSPKQQLNEQPRKRRNLAEESTEEGPTNGGGDCEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRHSQRAALLVLGNILENAIE--EDAGAVGGVKSPEGARRASESCAVELDRGLAALAAGGTGEWAEDDERDP-----AAAVRRVGKSRREFVESVHNLVHSDDPVTAA---NEEDGLGEDLLEAVEAIRKILEESG 701
BLAST of mRNA_P-littoralis_Contig136.77.3 vs. uniprot
Match: D7FSE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE1_ECTSI) HSP 1 Score: 363 bits (932), Expect = 4.390e-110 Identity = 326/784 (41.58%), Postives = 388/784 (49.49%), Query Frame = 3
Query: 105 VDNAVDDAGGGTLPIYERSLLGEGD---NNAFVIRLLRVFLGAAVRDXXXXXXXXPDLPSHHSSSRTSCGRRVQCAPSSLPATAAAPTTVA----------SEQAEKVQPAQNIAKC--EESPG----PTAQQGATKGKTDIAAAAAEASATVDAREQAGCTLWDMSADERHASAMCSAGLVAVSCAVLGYCAGAAATAQLRALAVAKEEPDGSAVTKLPVILVTAAEPVEAPKAPDTALSAPSGGQEVERLREIACGLLANACSHRSLRQQIAGDPPLGEELLLAFHCTDDSASLTELLRLFSTAALM-----------------------------------------------------------------------PTAG-----------------------------------------GLSSGLAAKDTLERLAFILENSLEEKLLARACSLAYSLMYKHGDAVIRPLVEAFRLEESLAALLNFRSTDLAYEKLGGKETGFDVLLRCLEVLSTSEYSCIGPSPPAAVALPPAVKNXXXXXXXXXXXXXXXXXXEVKGGCASALQYVENHXXXXXXXXXRTRKKTGAGEEDNLIDPAKGNDRTTAVVE-GVTTTKTQ-AMSKSDKRGSVIRGMVAALVPWEHSRQTQRAALLVLGNVLDNCLDGGPDAPSEGVKDGKYADRSASESCAEDLDKALVTSATGGQGEWANEEXXXXXXXXEVVGVDRLAKRRREFLQSVNNLVSGGDSTAAAAVADEGDGLGEELHEAVEAVRKVLEIAG 2057
+D +D GG +L EGD NA +IRLLR+FLGAAV D PS AP SLP + +AP A S K P + C SP P Q + +TD+A+ DAREQAGC LWDMSA+ER+ASAMCSAGLVAVSCAVL CA A +A A A S+ + +P AA V P P ++VERLRE+ CGLLAN SHR LRQQIAGD LG+ELL AFH TDD A LTELLRLFSTAALM P G GL+SG+AA +TLERLAF L NSLEE+LLA ACSL YSLMY+HGDAVIRPL+E F LE+SL +LL RS DLAYEKLGG ETGFD LLRCLEVL+TS+ S +GP XXXXXXXXXX XXXXXXXXX RK EE P G + AV E T+KT+ ++ + + RG VIRG+V+AL PWEHSR++Q+AALLVLGN+L+N ++ DA + G RSASESCA +LD+ L A GG GEWA + V+R+ K RREF++SV LV D +A +E DGLGE+L EAVEAVRK+LE +G
Sbjct: 1 MDVMHEDGGG--------NLYNEGDPSDENASIIRLLRIFLGAAVGDQDDDNTP----PS---------------APPSLPDSTSAPPLPAXXXXXXXLGQSPLTGKPDPCLSGGDCLGRNSPKLLGQPPKLQRTAESETDMAS-------VPDAREQAGCALWDMSAEERNASAMCSAGLVAVSCAVLRQCANAIVSAAAEARAGGLS----SSKSLMPAEAKEAAMAVAPPLPPR---------EQVERLREVTCGLLANVFSHRGLRQQIAGDLALGQELLGAFHSTDDPACLTELLRLFSTAALMKSTESAYDAHAAGSTNDPVGDGRAATTVSPEPNRSGEIHGEGHTGAGALRMVAGAAGAAEAASGPVELSSEPAVGDNRTAVTSAARERNEAEATAVSASAPNTEGAALAIAARGSAGLASGIAAGETLERLAFFLGNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEKSLCSLLQSRSGDLAYEKLGGTETGFDALLRCLEVLTTSKVSGVGPP---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRK---LAEEGTAEGPTNGGENCEAVCEVQPETSKTRPSLGRGEMRGRVIRGLVSALTPWEHSRRSQKAALLVLGNILENAIE--EDAGAVGGVKSTEGARSASESCAVELDRGLAALAAGGAGEWAEDGERDP-----AAAVERVGKNRREFVESVQKLVHSDDPVTSA---NEEDGLGEDLLEAVEAVRKILEESG 703
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 4155.Migut.D02321.1.p |
| Model size | 2645 |
| Max annot lvl | 35493|Streptophyta |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Evalue | 1.39e-06 |
| EggNOG OGs | 28JS7@1|root,2QTWY@2759|Eukaryota,37NGC@33090|Viridiplantae,3G96B@35493|Streptophyta,44G1I@71274|asterids |
| Cds size | 1986 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789630.5676308-UTR-P-littoralis_Contig136:433356..433451 | 1680789630.5676308-UTR-P-littoralis_Contig136:433356..433451 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig136 433357..433451 + |
| 1680789630.6398976-UTR-P-littoralis_Contig136:442777..443341 | 1680789630.6398976-UTR-P-littoralis_Contig136:442777..443341 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig136 442778..443341 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789630.5776637-CDS-P-littoralis_Contig136:433451..433523 | 1680789630.5776637-CDS-P-littoralis_Contig136:433451..433523 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig136 433452..433523 + |
| 1680789630.5886443-CDS-P-littoralis_Contig136:439662..440351 | 1680789630.5886443-CDS-P-littoralis_Contig136:439662..440351 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig136 439663..440351 + |
| 1680789630.6006296-CDS-P-littoralis_Contig136:440720..440940 | 1680789630.6006296-CDS-P-littoralis_Contig136:440720..440940 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig136 440721..440940 + |
| 1680789630.6089282-CDS-P-littoralis_Contig136:441187..441322 | 1680789630.6089282-CDS-P-littoralis_Contig136:441187..441322 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig136 441188..441322 + |
| 1680789630.6174662-CDS-P-littoralis_Contig136:441511..442197 | 1680789630.6174662-CDS-P-littoralis_Contig136:441511..442197 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig136 441512..442197 + |
| 1680789630.6267564-CDS-P-littoralis_Contig136:442593..442777 | 1680789630.6267564-CDS-P-littoralis_Contig136:442593..442777 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig136 442594..442777 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig136.77.3 >prot_P-littoralis_Contig136.77.3 ID=prot_P-littoralis_Contig136.77.3|Name=mRNA_P-littoralis_Contig136.77.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=662bp
MNAVDNAVDDAGGGTLPIYERSLLGEGDNNAFVIRLLRVFLGAAVRDDDD DGGTTPDLPSHHSSSRTSCGRRVQCAPSSLPATAAAPTTVASEQAEKVQP AQNIAKCEESPGPTAQQGATKGKTDIAAAAAEASATVDAREQAGCTLWDM SADERHASAMCSAGLVAVSCAVLGYCAGAAATAQLRALAVAKEEPDGSAV TKLPVILVTAAEPVEAPKAPDTALSAPSGGQEVERLREIACGLLANACSH RSLRQQIAGDPPLGEELLLAFHCTDDSASLTELLRLFSTAALMPTAGGLS SGLAAKDTLERLAFILENSLEEKLLARACSLAYSLMYKHGDAVIRPLVEA FRLEESLAALLNFRSTDLAYEKLGGKETGFDVLLRCLEVLSTSEYSCIGP SPPAAVALPPAVKNSPAVEETSTVGAETTAAAEVKGGCASALQYVENHHQ QQQQQQLRTRKKTGAGEEDNLIDPAKGNDRTTAVVEGVTTTKTQAMSKSD KRGSVIRGMVAALVPWEHSRQTQRAALLVLGNVLDNCLDGGPDAPSEGVK DGKYADRSASESCAEDLDKALVTSATGGQGEWANEEEQEQEQEEEVVGVD RLAKRRREFLQSVNNLVSGGDSTAAAAVADEGDGLGEELHEAVEAVRKVL EIAGKLKNNQL* back to topmRNA from alignment at P-littoralis_Contig136:433357..443341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig136.77.3 ID=mRNA_P-littoralis_Contig136.77.3|Name=mRNA_P-littoralis_Contig136.77.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9985bp|location=Sequence derived from alignment at P-littoralis_Contig136:433357..443341+ (Pylaiella littoralis U1_48) ATGGGGGGTCATGTACCATAGACCACAACACACAATCCAGATCAGCCTTT
TCTCGTGCTCCTTCGTCTGTCGGCGGCTTCAAGTAGTGTCGAAGAATGAA
TGCGGTAGATAATGCAGTGGATGATGCAGGAGGCGGAACCCTCCCCATCT
ACGAACGAAGTCTGCTGGTGAGACCGCAACACGCCCAAACAAACAGCATA
GATGCAGACAGAAGTGCCGCCGCAATCGACTGCTTTCAAAGTCCACCTCA
TCTGATATTATCTGCAATGCATGTCGTGCTGCGTATTGAATTTTGAAACA
AATGTTCCGTGTTGTTTTGACCCGCATCTTTGTACACTGCCGCGGGGTAC
TTCTTGCGATGATCTTTGACCAGGCAGGCGTACATATACCAGATGAGCTG
GAAGGTGATGAGCGACTACGTATGCTTTTGATTGCACGGTACGAAACATT
TTTCCAAAGAGGTGTGTCGCGGGACTGTCAGCTTCGTCCTGACGCCGAGG
TAACCGAAATACTGCTGTACCAAAACGCCAAAAAACAGCGCTGGTCAAGG
GCATCGCTGGGCGAAGAGTTGTGGCGGTCAGAACGTTGCATGCACGGGAC
CACAGTACCCAAATCTGTCCTACGTTCTTGCCTAGATTCTTTTTTTATTG
AGAAGCAGTCCACGAGCCCAGCGAAGTGAAACTTCGTTGTCGAATTGCTT
CGAATTCATACCTACTTAATGTGCAGGTGTTAGAGTGTTCGAATACTAGT
GGGTCGGGGGTGAAAATATTTAGGGCTGCTTCTCAAGTAAATGCGTTATC
CTTTGAACCCCCCAACCCCGATTGGGGACAATTTGGGGACACCTGCTTTT
TTTTTGTGACTTGGGTTTTGAAGGCGCCTTTCTACAGGTATTTTGGGTGT
GGTTCCGTGAGCTCGATGGAATGTGTGTGGATCGACCAATCGTTGGCTGC
CTCCGTGCGCGCGCCCGACCGTTATAGGTTTGTTGTGTGTTCTTGTGTCT
TCCCTCTACAGCGTAGACACAACTAACTGCGATCGTCTTGTATCACACAC
CATGCCGGCACCCCTCCCTGCCTTGCACACATGCACACAAACATAATACA
TGATACATATGTTAGACTATACCGCTGCGATGAAACGCTGATTGACGATG
ACGTACGGCTGCTGCACTTAGAACAGATGCTGCAGCAGCTGATTGATGTG
TCGTGCGATTGGTTGGTGAGACACACACCGCGCGCACGCGGGCCGACACT
ACAAACAGACACATCGTGCCACGCACGTTTGAAAGCTCACAAGCATACCC
GACGATCTCGTACGAGTATCATCACATACTACATACATGGGTACCATCAC
ATGCCGACACCCTTGCGTTGATCATGCAACATATATATGTTTGTTTGTCA
TGGGACTGCTGTATCGTAGGGAAGATGCTGCTGATAAGGATGATGATGGT
GATGCTGTAGACCCTGCCTGAGTGACTGTCGTGCGCGGGTATAACCTTGC
GGAGTGGAACCCTACTGCTGTGTGGTTGTCGAGCGGGGTACCCTGATCTG
CCATGCTAAGTGGCGGTGTTGCTGCTTGCGTGCTACTTGCACACAGCAGT
ATCCCTTTGTTTGAAGCAACATACATCCTGCAAAACTAAACAAACAACTT
TTGTGTAGGTGACCCTCCCAAAAACGTTTGGTGTAGCTTTAGACTGGAAT
CTGTCCCCATTTTTTTCAGGGCAAATTGGGGACAGATTTCTGTGTATAAC
CAAGTCACACCCTTTTCTCACCGGACAGAGCCAGCGAGACGTCAGTCCCT
TTTTTTTAATGAGACTGTCCACCATTCGCCAATCATCGGCGCACCGAAAT
CAGTTAATTTTTGGCTCCGTGATTATTTTTTCAGACCCCTGGGGGATGAA
AGGGTTATGCCGTGTGCGTTGCTGTCAAGTCTCGTGGCTCGATTATCCCT
TGGTAACATACAGCAGAACAGCTGGTGGTGTTCCGCCAGCACAACGAACA
CAAAACGCCTCTCATAATTTTTCATAAAAAAGCGACACCGATAATTACGC
GCCTTCGACAACATAGCTGTGCGCATATGACACGGGCTGCGGTGAACCCA
GCAGCAATGGGTGAATGATATTTACCTCGTCAGTTGAAGCCCTTGGTCGT
AACGATCTGCGCTAAGCTGGTACCTTGAGGTTGCAGAATATGGACCATAT
CTCGGACGGACACACAGACCGACATTGACACCATCAACCTCGAATATTAT
ATAAAGGCACCCCTGTCTCATTTTTATTTTATTTTATTGAGAAGCAGTCC
ATGAGCGCAGCAGAGTGTAACTTCTGTGTCGAACCGCTTCGAATTCATTC
CGACTTGATCGTGATGTGTATGTGCGAATAAAAAAAAGAATGAGACAGGG
GTGCCTTTATTTAGTTTGCGAGGTTTATGGTGTCTGTGTGTCCGCCCGAG
ATGATGCCCACATTTTGCGACACTTTGACACCAGTTCAGCACAGATCGTT
ACGACCAAGGGCTTCAACTGATGAGGTAAACAGCATCTACCCACTGCTGC
TGGCTTTATCCCGGCCTGTGTCCTGTGCGCACAGCTATGTTGTCGAAGGC
GCGCAAATATTGGCGTCCCTTTTCTTGTGCAAAATGATGACATGTTGTTC
GTTGTGCTGGTGGAACCCAGAGTGGCTATACACAACTCTACATATGGAAC
CGCACGCGGATTAACGAAGGGATTTGAGAAGCGGCCCTCCAACGCACACT
GCTTCTCAACTCTTATCCACTAGTATTTAGAAGCAGTCCACGAGCGCACC
GGAGTGTAACTTCGGTGTCGAACGGCTTCGAATTCATACCGACTTGGTCG
TGATGTCCACGTGTGAGTGTATGTGCGAGTACCAAAAACAAAATGAGTCA
GGGGTGCCATTTTTCGAGGTTTATGATATCTTGTGTGTCTGTGTGTCTGT
CCGAGATAATGTCCATATTTTGCAACACTTGGGCACCAGTGCAGCACATA
TCGTTAGGCCCTGTATTAACGATAGTGGGAAAATCATTATTGGAATAAAT
CATTATCATAGAAGGTCGCTGATCGGCCAAGCTTTTATTACCTTCCGACG
ACGCCAATGATTTTCCGAAAAACCCTTCGAGGCCAAAGAAGTCCAAAAAT
ACTTCATTGGAAGAAAATCATTAATCATTATTGGAGAAGGCTTTTTCTGA
ACGATGTGCCTCGCGCACGAGGCTGGCCAGACCAAATACTACCGAGGCAA
CCAACAGCAGTGCCACAGAACATAGCATAGAGGTTTGCCGTGGCACCAGG
CAAGCCAACGTTAGTACCACACATGACAGCGCAACAAACAAATACACCAG
TTAGTTTGCATGATTGATGATGACGACCCACATTTCATTTTGCACAACAC
ACCATCAGCACACACGACGCAGACAGGCAGGTCACAGGTCACGAGCACGA
AGTTGCCTCTCACAGCCCATGGCAGACAGACACATGACACAGTAGCATTC
TTGAGTGCACGAGCCAACACACATACACACACCGCACACAGCTACAAACG
GGGTGTCTGTCAGCATCAAGGCTTGGTGCACAGAGCCCACGACCTTGCCT
TGCATGCGAGAGAGGAGGCACATGATGCGTCCAAGTACTGCTGCACTGCT
GTACGGAGTACTTTGTACAGCAGTAGATTTTATTGTTCTGTTTTACCCGT
CGTGTCGTCATCATCAGAGGTTTAGCTCTTTCGTTAATATGGCTCGAAGG
GTTTTTCGGAAAATCATACTATGATAATGATTTCAATAGTGATTTTCCGA
CTTCCGTTAACACAGGGCCTTACGACCAAAGGGCTTCAACTGATGAGGTA
GGGCTTCAACTGATGAGGTAAAAAATACCTACTAATGGCTGCTGGTTTCA
CCGCAGCCCCTCTCCTGTGCGCACAGCCATGTTGTCGGAGGCGCGCAGTA
ATCGGTGTCCTCTTTTGGTGCAAAATGATGCGAGACGTTTTGTTTTGTGA
TGGCGGAACACCAGCAGCTGTTCTTTTGCTGTAGATTTTGTAGCAAGGGT
ATATACGCCGCTGGCGCTCTTCACACCAATTCCCCGCCGACAGCGTGCAC
ATCTTCCTATGATATGCATGCACCGTGGGTGTGACATGGGGACTTCCTGC
GCTGCAACGGCAGCTTTCATTGGGTAAACTCTGCTGGCCGTTCTTCTCCT
TGTTCCATCGGGAGCCATTTTTCCCTTCGTTGTGTGTCAACACCCCAGTA
GTATGTGAGGTGGCTTTCGTAGTGCGTCAACATCCAGTAGTATGTGATGT
GGGATAGAAGTGAGTGAGTGCTGAAGGATGTTCACGAAGCCCAGAGTGGC
TACAAATCGAACCACAAAACTCAACAGCAACGCACCCGGCTCAACGCAGT
TATTTGAGAAGCGGCCCTCCAACGCACACTGCTTATCAACCCCAATCCAC
TTGTAAGGTCACGCTGGGTTCAGTACAAAAAGAAAGCGGAAGAAAAAACG
AACGACGTTTTTGCTAGAGTAATTATCACTGAAATATAGGATCGGGGATT
TGCATAATGCAGCTTTCTTTCCAGGGGACGAAAAAGTCAACAGGGTATCA
TCTTTTTTTGGAACATACTGCGCGGTAGAATGATTTTTTCAAACTCCGCC
AACCCAAAAACCTCCGGATGTTTTTACTGCTTGTGCCAGCCCGGTAAGCC
AGCTACATTTGCGTCGAGTCCGTCTGTAAATCGGGAATGTACGCGTTGAG
AACGGCAGTTTCGCATTATCGCACCCCGCAGATGTTCAAGTGCGATGCAA
TTTCGGGCCGCTGCATGCATCTAGATACTAAATCAAAAGTTCCGAAGAAT
ACCTCTAGAATCGTTTCTGGCTGCCCGTTGCTGCTGCCAAGGCATTGGAC
GCCTCTCACCCACCATATCTATGGGCTGTGGCACTTTCGAGCAGTGTGGT
TGCTTGTGGCGAGCTTGCGCTATCGTGAACTGAAGCACAGTTTTCTGGGC
TTTTTCACCAATTTCTTCTCGAGAAGATGTTGCTCAAAACGTTAATTTTG
ATCGTCTCGATCTCGCGCTACAAGGCCTAGACTGGCATGCGGCACAGTTT
TGATCCACTCAAGATCACAAGCTAAGGTGCTTCTCCACAGAGATAAGGAG
GATTCTACCTCCGAACGCAAGCAGAGGAGGGGATGGGATGTGGAGTTTAC
AGCAGTAAGGGGGGGCACGGCGAAGGATTTTTTATCTGTAAGTTGAAAGA
AAAAATGATGCCGTTGGAGCAAAAATGCAACAAGGGAACCCGGGATACCG
GGACGCGTCTTCCCCTTTCTTTTTGTACTGAACCCGGCGTAGCGTTAAGA
ATCCACTGACAAGGGCGGTAAAACCCTCGGGGAAAATCTCATTGCGGGCC
CTAAGGGTAAATTTCATTATTTTATCAAGTCAAACCAACTGATTCTCATA
CGGCTCGAAGGGCTGTTGTGCGAACTCAATAATATCACGTACGTTTATCA
GTAGAGGATACTGTAGAGCAGCTATGTGTGTGTTGGCACGTCCAGGCATG
CTGCTGGAGCTGAGATATCGAAGCCTGCAGCAATGGCTCAAAACGTCCGC
AAACTGCGGCCGAACTGGACCGACACCAAAGGTTTGTCACTTCTTTGCTT
GCCGCCACGGACCCCAACCGCCTGAACTGCAGGCCATCCGAGGTAGCTGT
GGTACTGCAGTAGACCCGCAGCTCAGGAGGTTGGGGCTTGTGGCGGCAAG
TACCGCAGTGGCAAGCCTCTGTTGTCGGTCCAGTTCGGCCGTAGTTTGCG
GACTTTCTGAGCCACTGCTGCAGCCTTCGACATCTCAGCTCCAGCAGCAT
GTCTGAACGTGCCGAGACACACATAGCTGCTCCAAGGTGTCCTCTACTGA
TAAACGTACGTGGTGTAATTGAGTTCGCACAATAGCTCCTTTTTGAGCCT
TATCAAATGAAGCTATTTTGACTTGATTTTAGTACGGAAAGAACATATCT
TGATGTTTTTGAGGGAGATTGGAGGTAGAGATGTGTGATATGCATGTGAA
GAGAGGCCCCTACCGCCGCTGCGTGCGATAACCAACAGTGTGTATCTTTC
CCGACGCCTCCCTACTGGTCTAAGGTACCCAGTGTATGATTATCAGGGCC
CCTTCGCTGTTTTTCCAAATCCGTGCCTCTCAACAATCTATCGTCCCTGC
ATGCTTAATGTCCGAAATAAGTCTCGGTGATCTGTGATGTAGGGAGACCT
GAATCTTGTCTCGGAGATCTGTAGATGATGACCCGCTCACCCCGCGTTCC
GCCCAGGGTGAGGGCGACAACAACGCCTTCGTGATCCGACTGCTTCGTGT
CTTCCTCGGTGCGGCGGTTCGAGATGACGACGACGACGGTGGTACAACTC
CGGATCTGCCCTCCCATCACAGCAGTAGCAGGACCAGTTGCGGTAGGAGA
GTGCAGTGTGCACCGTCCTCATTGCCAGCAACGGCAGCAGCACCAACAAC
AGTAGCTTCTGAGCAGGCGGAAAAGGTACAGCCGGCCCAAAACATAGCAA
AGTGCGAAGAATCGCCGGGGCCAACGGCGCAGCAGGGTGCAACCAAAGGG
AAAACAGATATCGCAGCAGCAGCAGCAGAAGCATCAGCAACAGTGGATGC
CCGCGAACAGGCTGGCTGCACGTTGTGGGACATGTCGGCGGACGAGCGAC
ACGCCTCTGCCATGTGCTCAGCGGGTCTGGTCGCCGTTTCGTGTGCCGTC
CTCGGCTACTGCGCCGGCGCCGCCGCGACAGCGCAACTTAGAGCTCTGGC
CGTAGCTAAGGAAGAGCCCGATGGGTCGGCGGTAACGAAGCTGCCCGTGA
TCCTCGTGACAGCTGCTGAGCCGGTGGAAGCGCCGAAAGCACCGGATACA
GCACTCAGCGCACCGTCCGGTGGACAGGAGGTGGAAAGACTGCGTGAAAT
AGCGTGTGGGCTGTTAGCCAACGCCTGTTCCCACCGATCCCTTCGGTGAG
AAACAGACCAGAGATGTCTTATGTTTGTTGGGCCCAAGTAGAGATTACAA
TACACCACAACGCGTTCGCCTGCTGTCGTGTTTGTAACACAACCAGACAG
CTTAAAATACCTATGCAAGTATTTTCGTTCCAAGTCAACGACATTCTCGT
CGTTCTTGATCATGATGCGAGAACAACAAACAGCACACATCCGCTTTCCC
CATATCGTTTTTTTTTTTTGGTGTGCCCAGGCTCTGCGCGATTGTAGGCT
GTTCCATGTTGGATGCATGGGCTGATTATTGCTCGAACTTTAGCATCAGC
AATAGCAACACCACCCACGCTGAAATACTGATTTGCATTCGATTCCGCCA
CCAAACGTCTTCAGGCAGCAGATCGCAGGAGACCCTCCCCTAGGAGAGGA
ACTTCTCCTGGCGTTTCACTGCACCGACGATTCTGCTTCCCTCACAGAAT
TGCTTCGTTTGTTTTCTACTGCTGCGCTGATGCCCACGGCGGGAGGGCTG
TCTTCGGGGCTAGCGGCGAAGGATACCCTGGAGAGATTAGCTTTTATTCT
CGAAAACTCATTGGAGGAGAAGCTCTTAGCGCGGGTAAGCGGTTGCGTAC
CCTCAGAAATCATGTTTCGAGTTGTTCGCCGTGACACGACCCTGAAACTC
CTAGACTTGCACATCGTACTGCACGACTATTTTTTGCCCCACCAACGGAC
GTTCCATCCATGTGGCGCTTGGGAGTTGTCCGTAGAATGTGATCTTAGCC
CGCCCCCTTCTTCTTGCCTCGCCTTGTCGGGACGTCGACACCCCCCTACC
CGCCCACGCACACACCCGCGTTCCCAAACAGGCGTGCTCGCTGGCATACT
CATTAATGTACAAGCACGGCGATGCTGTGATCCGTCCCCTGGTTGAGGCG
TTCCGGTTAGAGGAATCGCTGGCCGCCCTCCTCAACTTCCGCAGCACGGA
TCTTGCGTATGAGAAGGTATGGCGGCCGCTGTTGGTATTAATGTGGTGGT
CATGTGAGTATGGTCACGTCGTATTCCCTCTATAAACCCCGATAACGAGC
CGCAACAGGTAGTACAATCGAAGCAAATCGCGTCGCTATGTCGACGGCCT
CCTCGCTACCCCCCCGCCCCCTCACCGGACATCGCGAAAACAAATTGAGG
CATAGCTGGGGGGCAAGGAGACCGGGTTCGACGTCCTCCTACGGTGCCTC
GAAGTTCTCTCCACAAGCGAATATTCTTGTATCGGCCCTTCCCCGCCTGC
CGCCGTAGCCTTGCCACCGGCGGTAAAAAACTCGCCTGCTGTTGAGGAAA
CCTCCACCGTTGGAGCGGAAACAACGGCAGCGGCGGAGGTAAAGGGAGGG
TGCGCGAGCGCATTGCAATATGTAGAGAATCATCATCAGCAGCAGCAGCA
ACAACAGCTGCGAACGAGGAAGAAGACCGGGGCAGGGGAGGAAGATAATT
TGATTGACCCGGCGAAAGGAAACGACAGGACGACCGCCGTCGTTGAAGGC
GTGACAACGACGAAAACGCAAGCTATGAGTAAAAGCGACAAACGGGGAAG
CGTGATCAGAGGGATGGTCGCGGCGCTGGTGCCATGGGAGCACTCGCGCC
AGACCCAGAGAGCGGCATTGCTGGTGCTCGGGAACGTTCTCGATAATTGT
CTCGACGGAGGCCCTGATGCCCCTTCCGAAGGCGTGAAAGATGGAAAGTA
CGCTGATAGGAGCGCGTCGGAGTCTTGCGCTGAGGACTTGGATAAGGCAC
TGGTGACGTCAGCTACGGGAGGGCAGGGAGAGTGGGCGAATGAGGAGGAG
CAGGAGCAGGAGCAGGAGGAGGAGGTTGTCGGTGTTGATAGGTGAGTCGT
TTGTGACTGGTAAGCCTTGTTGTCTCCTAATACACCTCCTATTGCGAGCA
TAAACCATGTTTGCCACCCTCGACCCTCGGCGAGCCCGGCGCAAAAACTC
GCCTCCTAATAATGGTGCTGTTGCTGCTGCCTGGGTGTCTGGAGCCTCGG
GGTATACAGTACCTCCGTGCCCCCACCCTCGTCGTAGTAAACGCCCGTCG
CCATTGTTGTTGTCCCAATAACAAGTGTGGGAGACTGCGAGAGAAAGAGA
GAAATATACAGAGCGAGAGAGACCACCAATCGTGAGGTTTTGTGGTACGT
AGGATGCTAGACTTCAGTCAAGCAGCCCAGTGTCACGTTTGTCACATCAT
TGTGCTTGGCTATCTGTTGAATGCGCATGACTTTTAGGTTGGCGAAGAGA
AGGCGCGAGTTTCTGCAATCTGTCAACAACTTGGTCAGCGGCGGTGATTC
GACAGCGGCCGCAGCGGTGGCAGACGAGGGGGACGGGCTGGGAGAGGAGC
TTCATGAGGCTGTAGAGGCCGTCCGAAAAGTTCTAGAAATTGCAGGAAAA
TTAAAAAATAACCAGTTATAAAAGGAATTTTTACGCCATCGGCTGATGCT
TTTTTCGTTGGGTTTTTGTTCAGTGCGAACGCCTGAAGCAGGTCCCCTGA
TCCCGGCGCCAACACTGAGACCTTTGGCTGCGTTAGCTATAGTAAGTGGG
ACCTCGTGGTTCGTCTAAAACCAGGTCGGGGGCGGAGGTGAACGGGCGAA
GCCAACAGAGGTTTGGAACGCTAACAACAGAGTCACCGTAGGGCGCAGCA
TGGGTTACGCGGCGATATCTCTACCGGCTGCTCGGAGGTCGAGATCTTCA
CGCGTTTACCTCTGGACCTTTGGCAAGATGACTTATCTAGCAAAGTGAAA
CTTATGTATGAATTCAGCTGGCCATCATGGCGCATTCGTTATGTTTGTGT
AGCTGTCCTCTTTAGACGCAGAAGGATAACTTCCATGGTGCGTGGCTTAA
CGCAGTTGATGTCAAGGCTGGCTTCGACGGGCTCGACATGCTTGTGATCT
TTTACGGCCGTACACGCTAGCGCAAAAATTCTCAAAGAGAACCTGAGGTT
CTCTAGAGTATCTGTGGACCAACATTCAAAATACC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig136:433357..443341+ >mRNA_P-littoralis_Contig136.77.3 ID=mRNA_P-littoralis_Contig136.77.3|Name=mRNA_P-littoralis_Contig136.77.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1986bp|location=Sequence derived from alignment at P-littoralis_Contig136:433357..443341+ (Pylaiella littoralis U1_48) ATGAATGCGGTAGATAATGCAGTGGATGATGCAGGAGGCGGAACCCTCCC CATCTACGAACGAAGTCTGCTGGGTGAGGGCGACAACAACGCCTTCGTGA TCCGACTGCTTCGTGTCTTCCTCGGTGCGGCGGTTCGAGATGACGACGAC GACGGTGGTACAACTCCGGATCTGCCCTCCCATCACAGCAGTAGCAGGAC CAGTTGCGGTAGGAGAGTGCAGTGTGCACCGTCCTCATTGCCAGCAACGG CAGCAGCACCAACAACAGTAGCTTCTGAGCAGGCGGAAAAGGTACAGCCG GCCCAAAACATAGCAAAGTGCGAAGAATCGCCGGGGCCAACGGCGCAGCA GGGTGCAACCAAAGGGAAAACAGATATCGCAGCAGCAGCAGCAGAAGCAT CAGCAACAGTGGATGCCCGCGAACAGGCTGGCTGCACGTTGTGGGACATG TCGGCGGACGAGCGACACGCCTCTGCCATGTGCTCAGCGGGTCTGGTCGC CGTTTCGTGTGCCGTCCTCGGCTACTGCGCCGGCGCCGCCGCGACAGCGC AACTTAGAGCTCTGGCCGTAGCTAAGGAAGAGCCCGATGGGTCGGCGGTA ACGAAGCTGCCCGTGATCCTCGTGACAGCTGCTGAGCCGGTGGAAGCGCC GAAAGCACCGGATACAGCACTCAGCGCACCGTCCGGTGGACAGGAGGTGG AAAGACTGCGTGAAATAGCGTGTGGGCTGTTAGCCAACGCCTGTTCCCAC CGATCCCTTCGGCAGCAGATCGCAGGAGACCCTCCCCTAGGAGAGGAACT TCTCCTGGCGTTTCACTGCACCGACGATTCTGCTTCCCTCACAGAATTGC TTCGTTTGTTTTCTACTGCTGCGCTGATGCCCACGGCGGGAGGGCTGTCT TCGGGGCTAGCGGCGAAGGATACCCTGGAGAGATTAGCTTTTATTCTCGA AAACTCATTGGAGGAGAAGCTCTTAGCGCGGGCGTGCTCGCTGGCATACT CATTAATGTACAAGCACGGCGATGCTGTGATCCGTCCCCTGGTTGAGGCG TTCCGGTTAGAGGAATCGCTGGCCGCCCTCCTCAACTTCCGCAGCACGGA TCTTGCGTATGAGAAGCTGGGGGGCAAGGAGACCGGGTTCGACGTCCTCC TACGGTGCCTCGAAGTTCTCTCCACAAGCGAATATTCTTGTATCGGCCCT TCCCCGCCTGCCGCCGTAGCCTTGCCACCGGCGGTAAAAAACTCGCCTGC TGTTGAGGAAACCTCCACCGTTGGAGCGGAAACAACGGCAGCGGCGGAGG TAAAGGGAGGGTGCGCGAGCGCATTGCAATATGTAGAGAATCATCATCAG CAGCAGCAGCAACAACAGCTGCGAACGAGGAAGAAGACCGGGGCAGGGGA GGAAGATAATTTGATTGACCCGGCGAAAGGAAACGACAGGACGACCGCCG TCGTTGAAGGCGTGACAACGACGAAAACGCAAGCTATGAGTAAAAGCGAC AAACGGGGAAGCGTGATCAGAGGGATGGTCGCGGCGCTGGTGCCATGGGA GCACTCGCGCCAGACCCAGAGAGCGGCATTGCTGGTGCTCGGGAACGTTC TCGATAATTGTCTCGACGGAGGCCCTGATGCCCCTTCCGAAGGCGTGAAA GATGGAAAGTACGCTGATAGGAGCGCGTCGGAGTCTTGCGCTGAGGACTT GGATAAGGCACTGGTGACGTCAGCTACGGGAGGGCAGGGAGAGTGGGCGA ATGAGGAGGAGCAGGAGCAGGAGCAGGAGGAGGAGGTTGTCGGTGTTGAT AGGTTGGCGAAGAGAAGGCGCGAGTTTCTGCAATCTGTCAACAACTTGGT CAGCGGCGGTGATTCGACAGCGGCCGCAGCGGTGGCAGACGAGGGGGACG GGCTGGGAGAGGAGCTTCATGAGGCTGTAGAGGCCGTCCGAAAAGTTCTA GAAATTGCAGGAAAATTAAAAAATAACCAGTTATAA back to top
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