prot_P-littoralis_Contig136.59.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig136.59.1
Unique Nameprot_P-littoralis_Contig136.59.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length175
Homology
BLAST of mRNA_P-littoralis_Contig136.59.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.380e-8
Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 0
Query:   17 LKAVVYPISGRVFMTHCLKTSCDVTLEVMMRGYHVLGDFLAEVATLVLFSAP------------TRATLFN--TRRSTALPRGKPDSGRSSNGGFACRTARAFQETLWYSVYEFMTGPHSVAHDVGSLHPSLYPNSNIVRFVAPYANAED 152
            L  ++  I  R    H   T   +TL  ++    +  DFL +V T  L  A             T  T+    TR+S A         + S GGF    ARAFQE+LWY++++FMTGP      + ++  S +    I+RF+APY   +D
Sbjct:  332 LTGLMSRIMWRFTKAHQASTRKALTLGFLLGPERLKDDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWI-------KLSAGGFGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYFVEKD 474          
BLAST of mRNA_P-littoralis_Contig136.59.1 vs. uniprot
Match: A0A6H5KF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF40_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 3.430e-7
Identity = 44/150 (29.33%), Postives = 68/150 (45.33%), Query Frame = 0
Query:   17 LKAVVYPISGRVFMTHCLKTSCDVTLEVMMRGYHVLGDFLAEVATLVLFSAP------------TRATLFN--TRRSTALPRGKPDSGRSSNGGFACRTARAFQETLWYSVYEFMTGPHSVAHDVGSLHPSLYPNSNIVRFVAPYANAED 152
            L  ++  +  R    +   T   +TL  ++    +  DFL +V T  L  A             T  T+    TR+S A         + S GGF    ARAFQE+LWY++++FMTGP      + ++  S +    I+RF+APY   +D
Sbjct:   75 LTGLMSRVMWRFTKAYQASTRKTLTLGYLLGPERLKEDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWI-------KLSAGGFGSADARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKD 217          
BLAST of mRNA_P-littoralis_Contig136.59.1 vs. uniprot
Match: A0A6H5KHD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD1_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.820e-6
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   93 SNGGFACRTARAFQETLWYSVYEFMTGPHSVAHDVGSLHPSLYPNSNIVRFVAPYANAED 152
            S GGF    ARA QE+LWY++++FMTGP      + ++  S +    I+RF+APY   +D
Sbjct:  162 SAGGFGSANARAIQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKD 221          
BLAST of mRNA_P-littoralis_Contig136.59.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 9.630e-6
Identity = 39/138 (28.26%), Postives = 61/138 (44.20%), Query Frame = 0
Query:   17 LKAVVYPISGRVFMTHCLKTSCDVTLEVMMRGYHVLGDFLAEVATLVLFSA-------PTRATLFNTRRSTALPRGKPDSGRSSNGGFACRTARAFQETLWYSVYEFMTGPHSVAHDVGSLHPSLYPNSNIVRFVAPY 147
            L  +++ I  R    H   T   +TL  ++    +  DFL +V T  L  A       P      +      + R      + S GG     ARAFQE+LWY++++FMTGP      + ++  S +    I+RF+A Y
Sbjct:  182 LTGLMFRIMWRFTKAHQASTRKVLTLGYLLGPERLKEDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVIRKSKAWIKLSAGGIGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLARY 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K5R4_9PHAE4.380e-830.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF40_9PHAE3.430e-729.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHD1_9PHAE1.820e-641.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR20_9PHAE9.630e-628.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig136contigP-littoralis_Contig136:323834..329796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig136.59.1mRNA_P-littoralis_Contig136.59.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig136 323536..330559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig136.59.1 ID=prot_P-littoralis_Contig136.59.1|Name=mRNA_P-littoralis_Contig136.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=175bp
MWTRDTFSRPCFNGNVLKAVVYPISGRVFMTHCLKTSCDVTLEVMMRGYH
VLGDFLAEVATLVLFSAPTRATLFNTRRSTALPRGKPDSGRSSNGGFACR
TARAFQETLWYSVYEFMTGPHSVAHDVGSLHPSLYPNSNIVRFVAPYANA
EDGREEDRGASATGGGRRWQRQRQ*
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