mRNA_P-littoralis_Contig136.52.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig136.52.1
Unique NamemRNA_P-littoralis_Contig136.52.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 4.300e-113
Identity = 279/641 (43.53%), Postives = 344/641 (53.67%), Query Frame = 3
Query:  537 RTAANGGRKTP*VETVRRDPELMEQMPEMPGKGDPLGAAAARLAAANEEIVRGVAAALEAMKPHSKDGIGRKVYNSLLAALAGVGKHTCDPAXXXXXXXXXXXXXADGYPPAEPRDPAATLVARAEVLGVRSNTYREAHARMHNVNF------AYHRSR-LWRRGATPGLTARPRAT*QTHV*W--------TWRNGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAA---LPRRPRICDGINA*KLRLPVQLVQRWDGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRR--LDCSATCGKSSWRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            R  A  G +    ++V  D  L E++ E+   G+ LG AAA  AA + E  R + A++EA+K HS   IGR  YN+++AA AG  +HTCDP   XXXXXXXXXXX  G         A +L ARA+ LGVR  T+R A  RMH  +       A  + R LW            R        W        +  +G KAMWR SKKA EEYHPRRQL+V GD+V   FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGCLVEPKVSQ A   H      L     +   I+A       +      GC  W  MC+ LH+  +     +  F    R    GG      R  A +A   ++  F  P   P++     +M+D  V  + R+          H++  L      G   W+     S           WQ   R+ HNMCL T+ K ELL+ETDFIEKY++E  + L          M+   H   D          D G+H TDAWVFV SDPNHDFDFHIYA+DIILQ YI G+GRAATAGT  PTVH++TDGCAKQYKGKRNF  VA+SLHRLG IL+HN  VT   +G      GLLK L+REAEKRG RIHDT    DFL AY
Sbjct:  136 RQTAIDGHRDGVKQSVLEDDVLKEELRELLRVGE-LGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHG---------AVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFADQVMEDGKVHKKQQLPQGGKLGDL-WQEFVEHSKKYLHHHELAKWQ---RQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPD----------DNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAY 745          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 6.810e-109
Identity = 279/641 (43.53%), Postives = 344/641 (53.67%), Query Frame = 3
Query:  537 RTAANGGRKTP*VETVRRDPELMEQMPEMPGKGDPLGAAAARLAAANEEIVRGVAAALEAMKPHSKDGIGRKVYNSLLAALAGVGKHTCDPAXXXXXXXXXXXXXADGYPPAEPRDPAATLVARAEVLGVRSNTYREAHARMHNVNF------AYHRSR-LWRRGATPGLTARPRAT*QTHV*W--------TWRNGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAA---LPRRPRICDGINA*KLRLPVQLVQRWDGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRR--LDCSATCGKSSWRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            R  A  G +    ++V  D  L E++ E+   G+ LG AAA  AA + E  R + A++EA+K HS   IGR  YN+++AA AG  +HTCDP   XXXXXXXXXXX  G         A +L ARA+ LGVR  T+R A  RMH  +       A  + R LW            R        W        +  +G KAMWR SKKA EEYHPRRQL+V GD+V   FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGCLVEPKVSQ A   H      L     +   I+A       +      GC  W  MC+ LH+  +     +  F    R    GG      R  A +A   ++  F  P   P++     +M+D  V  + R+          H++  L      G   W+     S           WQ   R+ HNMCL T+ K ELL+ETDFIEKY++E  + L          M+   H   D          D G+H TDAWVFV SDPNHDFDFHIYA+DIILQ YI G+GRAATAGT  PTVH++TDGCAKQYKGKRNF  VA+SLHRLG IL+HN  VT   +G      GLLK L+REAEKRG RIHDT    DFL AY
Sbjct:  760 RQTAIDGHRDGVKQSVLEDDVLKEELRELLRVGE-LGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHG---------AVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFADQVMEDGKVHKKQQLPQGGKLGDL-WQEFVEHSKKYLHHHELAKWQ---RQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPD----------DNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAY 1369          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 2.280e-94
Identity = 203/452 (44.91%), Postives = 250/452 (55.31%), Query Frame = 3
Query: 1077 NGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAA---------LPRRPRICDGINA*KLRLPVQLVQRWDGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSS--WRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            +G KAMWR SKKA EEYHPRRQL+V GD+V   FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGCLVEPK+S  A   H            +P     CD           +      GC  W  MC+ LH+  +     +  F    R    GG+     R  A +A   ++  F  P   P++     +M+D  V  + R+          H++       GK    W+     S           WQ   R+ HNMCL T+ K ELL+ETDFIEKY++E  + L          M+   H   D          D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRAATAGT VPTVH++TDGCAKQYKGK NF  VA+SLHRLGV+L+HN  VT   +G      GLLK L+REAEKRG RIH+T    DFL  Y
Sbjct:   55 SGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYLKVEMLMPAMHSNCD--------CTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFEDQVMEDGKVHKKQQIPQ-AGKLDDLWKEFVEHSKKYIHHHELAKWQ---RQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPD----------DDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKHNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVY 479          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 4.190e-81
Identity = 199/485 (41.03%), Postives = 246/485 (50.72%), Query Frame = 3
Query: 1092 MWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCG-----------------------------------CL-VEPKVSQYA*DPHAAALPRRPRICDGI--NA*KLRLPVQLVQ-----RW----DGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPP--APLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSS--WRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            MWR SKKA EEY PRRQL+V GD+    FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCG                                   C+ VEPKVSQ A   H            G+   A ++ +P          +W     GC  W  MC+ LH+  +     +       R    GG         A +A   ++  F  P   P++     +M+D  V  + R+          H++       GK    W+     S           WQ   R+ HNMCL T+ K ELL+ETDFIEKY++E  + L          M+   H   D          D G+H TD WV V SDPNHDFDFHIYA+DIIL+ YI G+GRAATAGT VPTVH++TDGCAKQYKGKRNF  VA+SLHRLGV+L+HN  VT   +G      GLLK L+REAEKRG RIHDT    DFL AY
Sbjct:    1 MWRPSKKAGEEYQPRRQLMVAGDQAWRKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGDRSSVMDSSAVSPPQEDGLFADPLSSFLSVSTVRLCVTVEPKVSQCACQIHTQ---------QGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALDCEKVDCLEEDR----GGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALGSMADRVVGWL-RFEDQVMEDGKVHKKQQIPQ-AGKLGDLWKEFVEHSKKYIHHHELAKWQ---RQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPD----------DDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAY 457          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.020e-77
Identity = 221/656 (33.69%), Postives = 297/656 (45.27%), Query Frame = 3
Query:  558 RKTP*VETVRRDPELMEQMPEMPGKGDPLGAAAARLAAANEEIVRGVAAALEAMKPHSKDGIGRKVYNSLLAALAGVGKHTCDPAXXXXXXXXXXXXXADGYPPAEPRDPAATLVARAEVLGVRSNTYREAHARMHNVN-------------FAYHRSRLWRRGATPGLTARPRAT*QTH-V*WTWRNGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAALPRRPRICDGINA*KLRLPVQLVQRWD---GCK*WAGMCRGLHTSRKTFCVSR-----------WTFWRTTRTLSTGGENRSASRATAQIAGLG---------TQTAFRPPAPLS*VRHTN--MSDGFVSKIKR----------WTTARGTRSSSHRRLDCSATCGKSSWRTPGSTSSTMSWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDG-GKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVTLQGRPR*HRG---LLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            R++  ++ ++ DP LME++  M   G     AAA++AA +    R + A+L+A+K H    IG   Y + LA  AG G+HTC                + G           +L  RA  LG+R  T+ +A  RMHN N             + Y+  +       P + A  RA   +  V     N  K M++ SKK     HPRRQL+ +GD V  MFL+   Y+AL++ LL+++ NF DPGRTTFLSTRCGCLV+P  SQ A   H         +   + +  +         W    GCK W+ MC+ L          +           + FW         G   + +       G G         T  A      ++ +R  +  M DG V K ++          W          H  L                      WQ   R+ H MC+ T R+ ELLIETDFIEKYR+E R  L          M+   H            SPD  G+H TDAW+F+ SDPNHDFDFH  A+++++  Y  G   AATAG+  P VHM+TDGC KQYKGKRNF  VAQSL RLGV +LHN  VT   +   H G   L+K L+R AE  G RI D +   +FLL Y
Sbjct:  132 RRSSAMDLMQNDPVLMERVRAMLDAGA-AEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGV----------SLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGS--IHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFW---------GRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSYMEHHAL--------------------AKWQ---RQAHKMCMATLRQGELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHH-----------SPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGT-HDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGY 730          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 8.990e-68
Identity = 186/512 (36.33%), Postives = 236/512 (46.09%), Query Frame = 3
Query: 1146 IVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAALPRRPRICDGIN--A*KLRLPVQLVQ-----RW----DGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSSWRTPGSTSSTMSWQ-----SGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD------------MLYRAHDD-----------------HD------------------GGPRAPYCSP------------DGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEK-----------------------------------RG*RIHDTNTVRDFLLAY 2339
            +V GD+V   FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGC VEPKVS+ A   H            GI+  A ++ +P          +W     GC  W  MC+ LH+  +     +  F    R    GG      R  A +A   ++  F  P   P++     +M+D  V  + R+          H++              P        WQ     S  R+ HN+CL T+ K  LL+ETDFIEKY++E  + L             +++ + DD                 HD                   G  A   +P            D G+H TDAWVFV SDPNHDFDFHIYA+DIILQ YI G+GRAATAGT  PTVH++TDGCAKQYKGKRNF  VA+SLHRLG IL+HN  VT   +G      GLLK L+REA                                     RG RIHDT    DF+ AY
Sbjct:    1 MVAGDQVWHKFLKWPEYMGLKAELLREDSSFTDPGRTLFLSTRCGCSVEPKVSKCACQTHTQ---------QGIDLKAFEMLMPATHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFADQVMEDGKVHKKQQL-----------PQGGKLGDLWQEFVEHSKKRQAHNICLATFSKGALLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQRIHDTQAAADFVKAY 487          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5JKB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB9_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 5.020e-60
Identity = 116/200 (58.00%), Postives = 135/200 (67.50%), Query Frame = 3
Query: 1773 WQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            WQ   R+ HNMCL T+ K ELL+ETDFIEKY++E  + L          M+   H   D          D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRA TAGT VPTVH++TDGCAKQYKGKRNF  VA+SLHRLG +L+HN  VT   +G      GLLK L+REAEKRG RIH+T    DFL  Y
Sbjct:   41 WQ---RQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPD----------DDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRADTAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGAVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVY 227          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5K6N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N6_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.650e-56
Identity = 113/200 (56.50%), Postives = 132/200 (66.00%), Query Frame = 3
Query: 1773 WQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVTLQGRPR*HR--GLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            WQ   R+ HNMCL T+ K ELL+ETDFIEKY++E  + L          M+   H   D          D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRA TAGT VPTVH++TDGCAKQYKGKRNF  VA+SLHRLGV+L+HN  VT   +       GLLK L RE E+RG RI +T    DFL  Y
Sbjct:   41 WQ---RQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPD----------DDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRADTAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKSADDGIGGLLKALSRETEERGQRIRNTQAAADFLQVY 227          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KIX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX9_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 3.890e-49
Identity = 91/131 (69.47%), Postives = 101/131 (77.10%), Query Frame = 3
Query: 1953 DGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            D G+H TDAWVFV SDPNHDFDFH YA+DIILQ YI G+GRAATAGT +P VH++TDGCAKQYKGKRNF  VA+SLHRL  IL+HN  VT   +G      GLLK L+REAEKRG RIHDT    DFL AY
Sbjct:   12 DDGRHETDAWVFVSSDPNHDFDFHTYAMDIILQYYITGDGRAATAGTPIPKVHIFTDGCAKQYKGKRNFHAVAKSLHRLDAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTQAAADFLKAY 142          
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5J993_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J993_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.330e-48
Identity = 92/136 (67.65%), Postives = 104/136 (76.47%), Query Frame = 3
Query: 1938 PYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
            P C  D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRAATAGT VPTVH++TDGCAKQYKGKRNF  VA+SLHRLG +L+HN  VT   +G      GLLK L+RE EKRG RIH+T    DFL  Y
Sbjct:   18 PTCPDDDGQHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGNVLIHNFAVTSHFKGAHDGIGGLLKALLREVEKRGQRIHNTQAAADFLQVY 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT99_9PHAE4.300e-11343.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW3_9PHAE6.810e-10943.53MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5K491_9PHAE2.280e-9444.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY26_9PHAE4.190e-8141.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7E6_9PHAE1.020e-7733.69Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXG9_9PHAE8.990e-6836.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKB9_9PHAE5.020e-6058.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6N6_9PHAE3.650e-5656.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIX9_9PHAE3.890e-4969.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J993_9PHAE1.330e-4867.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig136contigP-littoralis_Contig136:269092..272844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2727
Hectar predicted targeting categoryother localisation
Exons6
Cds size615
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig136.52.1prot_P-littoralis_Contig136.52.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig136 269708..270465 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789629.2828693-UTR-P-littoralis_Contig136:269091..2694571680789629.2828693-UTR-P-littoralis_Contig136:269091..269457Pylaiella littoralis U1_48UTRP-littoralis_Contig136 269092..269457 -
1680789629.2940722-UTR-P-littoralis_Contig136:269589..2697071680789629.2940722-UTR-P-littoralis_Contig136:269589..269707Pylaiella littoralis U1_48UTRP-littoralis_Contig136 269590..269707 -
1680789629.3246322-UTR-P-littoralis_Contig136:270465..2708061680789629.3246322-UTR-P-littoralis_Contig136:270465..270806Pylaiella littoralis U1_48UTRP-littoralis_Contig136 270466..270806 -
1680789629.3328638-UTR-P-littoralis_Contig136:270981..2711881680789629.3328638-UTR-P-littoralis_Contig136:270981..271188Pylaiella littoralis U1_48UTRP-littoralis_Contig136 270982..271188 -
1680789629.345284-UTR-P-littoralis_Contig136:271485..2720131680789629.345284-UTR-P-littoralis_Contig136:271485..272013Pylaiella littoralis U1_48UTRP-littoralis_Contig136 271486..272013 -
1680789629.3600154-UTR-P-littoralis_Contig136:272292..2728441680789629.3600154-UTR-P-littoralis_Contig136:272292..272844Pylaiella littoralis U1_48UTRP-littoralis_Contig136 272293..272844 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789629.304114-CDS-P-littoralis_Contig136:269707..2701971680789629.304114-CDS-P-littoralis_Contig136:269707..270197Pylaiella littoralis U1_48CDSP-littoralis_Contig136 269708..270197 -
1680789629.312477-CDS-P-littoralis_Contig136:270340..2704651680789629.312477-CDS-P-littoralis_Contig136:270340..270465Pylaiella littoralis U1_48CDSP-littoralis_Contig136 270341..270465 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig136.52.1

>prot_P-littoralis_Contig136.52.1 ID=prot_P-littoralis_Contig136.52.1|Name=mRNA_P-littoralis_Contig136.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp
MSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSSWRTPGSTSSTMSWQ
SGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLDMLYRAHDDHDGG
PRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRA
ATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVTLQ
GRPR*
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mRNA from alignment at P-littoralis_Contig136:269092..272844-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig136.52.1 ID=mRNA_P-littoralis_Contig136.52.1|Name=mRNA_P-littoralis_Contig136.52.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3753bp|location=Sequence derived from alignment at P-littoralis_Contig136:269092..272844- (Pylaiella littoralis U1_48)
GTCGATTCAAAGCTTTGGCCACCCGGGAATCGATTCCGCTGGGTCGAATT ACACACAGAGGACATCGCTTCCGCGGGTGTCAGACACGATCTCCGTCTGA AACGAGCTGCTGCTTCTGGCCCCTCAGACGGACCTGCTGTGGCTATAAAA AATGATCTCGGTAGCCTCCGCCAAAAAAATATTGATCGTCCTGTCAAAAC CGCCCGGGAAGACCGAATTGTGATGCAGCAGTCGAAGAAGGAGGCAACAG CAGGCTTCCGTTTGACGTCCATTCTTCTGGCCAAGCGTACCAAGAAGCCC CTTGGTGACGGTGGTTGCAGACTGGAGTAAACTTGTGACGTGTGGGAAAG AGAATGTGGAAGCGATCCGGGAACGAGCTGAGAAAATCCAGAACAAGCAC ACGACGGACACCGCACCGACTCAGCGGAGAAAGCGCACACCACCGCTGAT GTACAAGTCGCTGCAACAGACCCTCTGGAGGCGGAGCGGCACAGCGGAAT GAGGTGTCCTTCACAGCAGGCGAAGAAGCCAAAGGCCGCACGGCGGCTAA CGGTAAGTGCGTGTGGTGATTAATTGACATCAGCAATCTTCTACCAAACA TAGATCCTCGCTCGTCTCCTCTCTGAAAAATTGGTATAAATGTCTGCCTA ATTTTGGTGTAGTTCCTCTTCGCCTGCTCTACTGCTGTTTTCGAAACCAG TACCCCACTAATTTGGTATAATACAGTCCCTCCTCTCGTGTCTGACATCT ACTTCACTGCCGCTGCTGTTGTACTCTGATCCCCCCCCCCCCCCTCTGTC TCCTCCGGCCGAAACTACTGCTGTACTGTAGGCGGCAGAAAAACACCGTG AGTGGAGACTGTGAGAAGAGATCCGGAGTTGATGGAGCAGATGCCGGAAA TGCCGGGGAAGGGAGATCCGCTGGGAGCGGCGGCCGCGAGATTAGCCGCA GCCAACGAGGAGATCGTCCGTGGAGTAGCCGCTGCTTTGGAGGCGATGAA GCCGCACTCCAAGGACGGCATCGGCCGTAAGGTGTACAACAGTTTGCTGG CGGCTCTCGCCGGCGTGGGGAAGCACACGTGTGATCCTGCACACCGTTGC AGCCCCGCTGCCCGCTGCCCTCCCGCTGCCGCTGACGGCTACCCTCCCGC CGAGCCGCGGGATCCTGCGGCCACCCTCGTCGCGCGTGCAGAAGTACTTG GTGTTAGATCCAATACGTACCGCGAGGCGCACGCTCGGATGCACAACGTC AACTTTGCGTACCACCGCAGCAGGCTTTGGAGGAGGGGCGCTACTCCTGG GCTGACCGCAAGACCAAGAGCGACGTGACAGACCCACGTGTGATGGACAT GGCGAAACGGTACTGGCACTGCGATGACGTCTCCCGTGCATCGAGATATT CGGATAAGCTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCT CTTGTTGTTGATGCTGCTGCTGTTCTTTGTTGCTGCCGTCACTCTTTCTG TGGTTCCTGTGATGCCCTTGTGCTGTACTCTGCTGCTGCCGTCGCTGCTA CTGCTGTAGGCCTCACGTTATTTACCGCACACTGTTTTTGTCCCCCGCCT CCGCAGGCAAAAAGGCCATGTGGAGATCATCGAAGAAGGCGAGCGAGGAG TACCATCCTCGTAGGCAGCTCATAGTCCGGGGGGACGAGGTGCGCGGCAT GTTTCTCAAGTGGCCGTCGTACGTGGCACTCAGGGCAGAGCTGCTGAAGG AGAATGGCAACTTCAACGATCCAGGCCGGACGACCTTCTTGTCAACGCGG TGTGGGTGTTTAGGTGGGTATCCACGAAGAAGGAGCACAAGTGGTGATTA TCATGTCGCAGTGTAGGGAAGCGGGGGCACGTTTCCTACAGCACCGGCAT GTGTAAACCAGCGCGGTAGAGTTCTGACATACGTTTTCTTCCTGCCTCCC TGGTGTCATATTGATGCTTCGTGTTTTGTGCCTTGCAGTTGAGCCCAAGG TGTCGCAATATGCTTGAGACCCACACGCAGCCGCTCTACCTCGAAGGCCT CGGATTTGTGATGGGATCAATGCATGAAAACTGCGACTGCCCGTGCAGCT GGTGCAACGGTGGGATGGTTGTAAGTAGTGGGCGGGGATGTGCAGAGGTC TGCACACTTCTCGAAAGACTTTTTGTGTGAGTAGGTGGACCTTTTGGCGG ACGACTCGAACGTTGAGTACTGGAGGAGAAAACCGGAGTGCGTCGAGGGC AACTGCTCAGATTGCGGGTTTGGGAACCCAAACGGCATTCCGACCGCCTG CGCCGCTCTCGTGAGTGCGGCACACAAACATGTCTGATGGATTCGTTTCC AAGATCAAAAGATGGACGACGGCAAGGGGCACAAGAAGCAGCAGTCACCG CAGGTTGGACTGTTCGGCGACCTGTGGAAAGAGTTCATGGCGCACTCCAG GAAGGTGAACCTGTCATAACAATTATATATATATTTTCAATTGTTGTTTC ACTCGGTCGCAGTCAAATAAGTGTAGGGTGTATTACAGAAGCCAGCAAGC AATTTTTTATTATTCTGTCATCTCCTGTCCCTCCTCTTCTGCCGCAGTAC ATCGAGCACCATGAGCTGGCAAAGCGGCAGCCGAAAGGTCCACAATATGT GTTTGAGGACATACCGCAAATGCGAGCTGCTCATTGAGACCGACTTCATC GAGAAATACAGGTACGAAACCCGCTCTTGTCTTGATATGCTCTACCGCGC CCACGACGACCATGATGGTGGCCCTCGTGCACCATACTGTAGCCCCGACG GTGGCAAGCACACGACGGATGCATGGGTGTTCGTGCCAAGCGACCCCAAT CACGACTTCGACTTTCACATCTACGCCCTGGACATCATACTCCAGCCCTA CATCAAGGGTGAGGGGCGTGCCGCTACTGCTGGAACACGGGTTCCAACGG TGCACATGTACACTGATGGGTGCGCCAAGCAGTACAAGGGCAAGCGCAAC TTTATGACCGTGGCGCAGAGCTTGCACAGGCTTGGCGTCATCCTGCTGCA CAACTGTCACGTCACACTTCAAGGGCGCCCACGATGACATCGGGGTTTGC TCAAGACCCTCATGAGGGAAGCGGAGAAGAGAGGCTAGCGCATCCACGAC ACGAACACCGTGCGCGATTTTCTCTTGGCGTATGTGTGTGTGTTGTCATC CCTTTCATTGGACGCCCCTCTACACCTTTCGGGTAGGTACACGCTCCAAC CGGGGTCACACAGGGGGAAGTCAGCACAGGAGTTTTTTTTTTTTTTTGCT CCACTTCCCTCTGCGGTGCTTGCCTTTTTGGTTGAGCTTTTATCGCGAGA AAGGGGACAGCAATCCCTTTCCCTCGTCGATGGTACGATCGAATTTTGTT TACTCACAAATTGATCGCTTTACACTTTCACGCGCAATGTGAGAATATGC CGAGGGGAAAGACGGGGGCTAAGGAGGGCACTTCGCATCCTGGTCGCCCT ACAAGATCGCGGACCTCCACGTCAAGAAGCCCGGATTTAAAGAGATCCCT CGCCCAGCTGTACCAGTTCATGGGGGCAGAGGCACAGCAGGACAGTCGGG GTGTTAGCGTAGGTGTGCAGGCAGCAGACAGCAGAGTCGTGAAAGAGGGC GAGGAGGTAACATTAGACAGCCTGTTGCCGTTGGCGAGGAAACTGTACAG TAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig136:269092..272844-

>mRNA_P-littoralis_Contig136.52.1 ID=mRNA_P-littoralis_Contig136.52.1|Name=mRNA_P-littoralis_Contig136.52.1|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig136:269092..272844- (Pylaiella littoralis U1_48)
ATGTCTGATGGATTCGTTTCCAAGATCAAAAGATGGACGACGGCAAGGGG
CACAAGAAGCAGCAGTCACCGCAGGTTGGACTGTTCGGCGACCTGTGGAA
AGAGTTCATGGCGCACTCCAGGAAGTACATCGAGCACCATGAGCTGGCAA
AGCGGCAGCCGAAAGGTCCACAATATGTGTTTGAGGACATACCGCAAATG
CGAGCTGCTCATTGAGACCGACTTCATCGAGAAATACAGGTACGAAACCC
GCTCTTGTCTTGATATGCTCTACCGCGCCCACGACGACCATGATGGTGGC
CCTCGTGCACCATACTGTAGCCCCGACGGTGGCAAGCACACGACGGATGC
ATGGGTGTTCGTGCCAAGCGACCCCAATCACGACTTCGACTTTCACATCT
ACGCCCTGGACATCATACTCCAGCCCTACATCAAGGGTGAGGGGCGTGCC
GCTACTGCTGGAACACGGGTTCCAACGGTGCACATGTACACTGATGGGTG
CGCCAAGCAGTACAAGGGCAAGCGCAACTTTATGACCGTGGCGCAGAGCT
TGCACAGGCTTGGCGTCATCCTGCTGCACAACTGTCACGTCACACTTCAA
GGGCGCCCACGATGA
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