mRNA_P-littoralis_Contig136.52.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 377 bits (969), Expect = 4.300e-113 Identity = 279/641 (43.53%), Postives = 344/641 (53.67%), Query Frame = 3
Query: 537 RTAANGGRKTP*VETVRRDPELMEQMPEMPGKGDPLGAAAARLAAANEEIVRGVAAALEAMKPHSKDGIGRKVYNSLLAALAGVGKHTCDPAXXXXXXXXXXXXXADGYPPAEPRDPAATLVARAEVLGVRSNTYREAHARMHNVNF------AYHRSR-LWRRGATPGLTARPRAT*QTHV*W--------TWRNGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAA---LPRRPRICDGINA*KLRLPVQLVQRWDGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRR--LDCSATCGKSSWRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
R A G + ++V D L E++ E+ G+ LG AAA AA + E R + A++EA+K HS IGR YN+++AA AG +HTCDP XXXXXXXXXXX G A +L ARA+ LGVR T+R A RMH + A + R LW R W + +G KAMWR SKKA EEYHPRRQL+V GD+V FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGCLVEPKVSQ A H L + I+A + GC W MC+ LH+ + + F R GG R A +A ++ F P P++ +M+D V + R+ H++ L G W+ S WQ R+ HNMCL T+ K ELL+ETDFIEKY++E + L M+ H D D G+H TDAWVFV SDPNHDFDFHIYA+DIILQ YI G+GRAATAGT PTVH++TDGCAKQYKGKRNF VA+SLHRLG IL+HN VT +G GLLK L+REAEKRG RIHDT DFL AY
Sbjct: 136 RQTAIDGHRDGVKQSVLEDDVLKEELRELLRVGE-LGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHG---------AVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFADQVMEDGKVHKKQQLPQGGKLGDL-WQEFVEHSKKYLHHHELAKWQ---RQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPD----------DNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAY 745
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 377 bits (969), Expect = 6.810e-109 Identity = 279/641 (43.53%), Postives = 344/641 (53.67%), Query Frame = 3
Query: 537 RTAANGGRKTP*VETVRRDPELMEQMPEMPGKGDPLGAAAARLAAANEEIVRGVAAALEAMKPHSKDGIGRKVYNSLLAALAGVGKHTCDPAXXXXXXXXXXXXXADGYPPAEPRDPAATLVARAEVLGVRSNTYREAHARMHNVNF------AYHRSR-LWRRGATPGLTARPRAT*QTHV*W--------TWRNGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAA---LPRRPRICDGINA*KLRLPVQLVQRWDGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRR--LDCSATCGKSSWRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
R A G + ++V D L E++ E+ G+ LG AAA AA + E R + A++EA+K HS IGR YN+++AA AG +HTCDP XXXXXXXXXXX G A +L ARA+ LGVR T+R A RMH + A + R LW R W + +G KAMWR SKKA EEYHPRRQL+V GD+V FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGCLVEPKVSQ A H L + I+A + GC W MC+ LH+ + + F R GG R A +A ++ F P P++ +M+D V + R+ H++ L G W+ S WQ R+ HNMCL T+ K ELL+ETDFIEKY++E + L M+ H D D G+H TDAWVFV SDPNHDFDFHIYA+DIILQ YI G+GRAATAGT PTVH++TDGCAKQYKGKRNF VA+SLHRLG IL+HN VT +G GLLK L+REAEKRG RIHDT DFL AY
Sbjct: 760 RQTAIDGHRDGVKQSVLEDDVLKEELRELLRVGE-LGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHG---------AVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHA-NCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFADQVMEDGKVHKKQQLPQGGKLGDL-WQEFVEHSKKYLHHHELAKWQ---RQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPD----------DNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAY 1369
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 319 bits (818), Expect = 2.280e-94 Identity = 203/452 (44.91%), Postives = 250/452 (55.31%), Query Frame = 3
Query: 1077 NGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAA---------LPRRPRICDGINA*KLRLPVQLVQRWDGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSS--WRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
+G KAMWR SKKA EEYHPRRQL+V GD+V FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGCLVEPK+S A H +P CD + GC W MC+ LH+ + + F R GG+ R A +A ++ F P P++ +M+D V + R+ H++ GK W+ S WQ R+ HNMCL T+ K ELL+ETDFIEKY++E + L M+ H D D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRAATAGT VPTVH++TDGCAKQYKGK NF VA+SLHRLGV+L+HN VT +G GLLK L+REAEKRG RIH+T DFL Y
Sbjct: 55 SGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYLKVEMLMPAMHSNCD--------CTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFEDQVMEDGKVHKKQQIPQ-AGKLDDLWKEFVEHSKKYIHHHELAKWQ---RQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPD----------DDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKHNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVY 479
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE) HSP 1 Score: 281 bits (720), Expect = 4.190e-81 Identity = 199/485 (41.03%), Postives = 246/485 (50.72%), Query Frame = 3
Query: 1092 MWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCG-----------------------------------CL-VEPKVSQYA*DPHAAALPRRPRICDGI--NA*KLRLPVQLVQ-----RW----DGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPP--APLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSS--WRTPGSTSSTM-------SWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
MWR SKKA EEY PRRQL+V GD+ FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCG C+ VEPKVSQ A H G+ A ++ +P +W GC W MC+ LH+ + + R GG A +A ++ F P P++ +M+D V + R+ H++ GK W+ S WQ R+ HNMCL T+ K ELL+ETDFIEKY++E + L M+ H D D G+H TD WV V SDPNHDFDFHIYA+DIIL+ YI G+GRAATAGT VPTVH++TDGCAKQYKGKRNF VA+SLHRLGV+L+HN VT +G GLLK L+REAEKRG RIHDT DFL AY
Sbjct: 1 MWRPSKKAGEEYQPRRQLMVAGDQAWRKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGDRSSVMDSSAVSPPQEDGLFADPLSSFLSVSTVRLCVTVEPKVSQCACQIHTQ---------QGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALDCEKVDCLEEDR----GGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALGSMADRVVGWL-RFEDQVMEDGKVHKKQQIPQ-AGKLGDLWKEFVEHSKKYIHHHELAKWQ---RQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPD----------DDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAY 457
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 282 bits (722), Expect = 1.020e-77 Identity = 221/656 (33.69%), Postives = 297/656 (45.27%), Query Frame = 3
Query: 558 RKTP*VETVRRDPELMEQMPEMPGKGDPLGAAAARLAAANEEIVRGVAAALEAMKPHSKDGIGRKVYNSLLAALAGVGKHTCDPAXXXXXXXXXXXXXADGYPPAEPRDPAATLVARAEVLGVRSNTYREAHARMHNVN-------------FAYHRSRLWRRGATPGLTARPRAT*QTH-V*WTWRNGKKAMWRSSKKASEEYHPRRQLIVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAALPRRPRICDGINA*KLRLPVQLVQRWD---GCK*WAGMCRGLHTSRKTFCVSR-----------WTFWRTTRTLSTGGENRSASRATAQIAGLG---------TQTAFRPPAPLS*VRHTN--MSDGFVSKIKR----------WTTARGTRSSSHRRLDCSATCGKSSWRTPGSTSSTMSWQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDG-GKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVTLQGRPR*HRG---LLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
R++ ++ ++ DP LME++ M G AAA++AA + R + A+L+A+K H IG Y + LA AG G+HTC + G +L RA LG+R T+ +A RMHN N + Y+ + P + A RA + V N K M++ SKK HPRRQL+ +GD V MFL+ Y+AL++ LL+++ NF DPGRTTFLSTRCGCLV+P SQ A H + + + + W GCK W+ MC+ L + + FW G + + G G T A ++ +R + M DG V K ++ W H L WQ R+ H MC+ T R+ ELLIETDFIEKYR+E R L M+ H SPD G+H TDAW+F+ SDPNHDFDFH A+++++ Y G AATAG+ P VHM+TDGC KQYKGKRNF VAQSL RLGV +LHN VT + H G L+K L+R AE G RI D + +FLL Y
Sbjct: 132 RRSSAMDLMQNDPVLMERVRAMLDAGA-AEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGV----------SLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGS--IHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFW---------GRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSYMEHHAL--------------------AKWQ---RQAHKMCMATLRQGELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHH-----------SPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGT-HDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGY 730
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE) HSP 1 Score: 247 bits (631), Expect = 8.990e-68 Identity = 186/512 (36.33%), Postives = 236/512 (46.09%), Query Frame = 3
Query: 1146 IVRGDEVRGMFLKWPSYVALRAELLKENGNFNDPGRTTFLSTRCGCLVEPKVSQYA*DPHAAALPRRPRICDGIN--A*KLRLPVQLVQ-----RW----DGCK*WAGMCRGLHTSRKTFCVSRWTFWRTTRTLSTGGENRSASRATAQIAGLGTQTAFRPPA--PLS*VRHTNMSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSSWRTPGSTSSTMSWQ-----SGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD------------MLYRAHDD-----------------HD------------------GGPRAPYCSP------------DGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEK-----------------------------------RG*RIHDTNTVRDFLLAY 2339
+V GD+V FLKWP Y+ L+AELL+E+ +F DPGRT FLSTRCGC VEPKVS+ A H GI+ A ++ +P +W GC W MC+ LH+ + + F R GG R A +A ++ F P P++ +M+D V + R+ H++ P WQ S R+ HN+CL T+ K LL+ETDFIEKY++E + L +++ + DD HD G A +P D G+H TDAWVFV SDPNHDFDFHIYA+DIILQ YI G+GRAATAGT PTVH++TDGCAKQYKGKRNF VA+SLHRLG IL+HN VT +G GLLK L+REA RG RIHDT DF+ AY
Sbjct: 1 MVAGDQVWHKFLKWPEYMGLKAELLREDSSFTDPGRTLFLSTRCGCSVEPKVSKCACQTHTQ---------QGIDLKAFEMLMPATHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDR----GGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWL-RFADQVMEDGKVHKKQQL-----------PQGGKLGDLWQEFVEHSKKRQAHNICLATFSKGALLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQRIHDTQAAADFVKAY 487
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5JKB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB9_9PHAE) HSP 1 Score: 215 bits (547), Expect = 5.020e-60 Identity = 116/200 (58.00%), Postives = 135/200 (67.50%), Query Frame = 3
Query: 1773 WQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
WQ R+ HNMCL T+ K ELL+ETDFIEKY++E + L M+ H D D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRA TAGT VPTVH++TDGCAKQYKGKRNF VA+SLHRLG +L+HN VT +G GLLK L+REAEKRG RIH+T DFL Y
Sbjct: 41 WQ---RQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPD----------DDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRADTAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGAVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVY 227
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5K6N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N6_9PHAE) HSP 1 Score: 207 bits (527), Expect = 3.650e-56 Identity = 113/200 (56.50%), Postives = 132/200 (66.00%), Query Frame = 3
Query: 1773 WQSGSRKVHNMCLRTYRKCELLIETDFIEKYRYETRSCLD---------MLYRAHDDHDGGPRAPYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVTLQGRPR*HR--GLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
WQ R+ HNMCL T+ K ELL+ETDFIEKY++E + L M+ H D D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRA TAGT VPTVH++TDGCAKQYKGKRNF VA+SLHRLGV+L+HN VT + GLLK L RE E+RG RI +T DFL Y
Sbjct: 41 WQ---RQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPD----------DDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRADTAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKSADDGIGGLLKALSRETEERGQRIRNTQAAADFLQVY 227
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5KIX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX9_9PHAE) HSP 1 Score: 181 bits (460), Expect = 3.890e-49 Identity = 91/131 (69.47%), Postives = 101/131 (77.10%), Query Frame = 3
Query: 1953 DGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
D G+H TDAWVFV SDPNHDFDFH YA+DIILQ YI G+GRAATAGT +P VH++TDGCAKQYKGKRNF VA+SLHRL IL+HN VT +G GLLK L+REAEKRG RIHDT DFL AY
Sbjct: 12 DDGRHETDAWVFVSSDPNHDFDFHTYAMDIILQYYITGDGRAATAGTPIPKVHIFTDGCAKQYKGKRNFHAVAKSLHRLDAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTQAAADFLKAY 142
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Match: A0A6H5J993_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J993_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.330e-48 Identity = 92/136 (67.65%), Postives = 104/136 (76.47%), Query Frame = 3
Query: 1938 PYCSPDGGKHTTDAWVFVPSDPNHDFDFHIYALDIILQPYIKGEGRAATAGTRVPTVHMYTDGCAKQYKGKRNFMTVAQSLHRLGVILLHNCHVT--LQGRPR*HRGLLKTLMREAEKRG*RIHDTNTVRDFLLAY 2339
P C D G+H TDAWVFV SDPNHDFDFHIYA+DIIL+ YI G+GRAATAGT VPTVH++TDGCAKQYKGKRNF VA+SLHRLG +L+HN VT +G GLLK L+RE EKRG RIH+T DFL Y
Sbjct: 18 PTCPDDDGQHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGNVLIHNFAVTSHFKGAHDGIGGLLKALLREVEKRGQRIHNTQAAADFLQVY 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig136.52.1 >prot_P-littoralis_Contig136.52.1 ID=prot_P-littoralis_Contig136.52.1|Name=mRNA_P-littoralis_Contig136.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp MSDGFVSKIKRWTTARGTRSSSHRRLDCSATCGKSSWRTPGSTSSTMSWQback to top mRNA from alignment at P-littoralis_Contig136:269092..272844- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig136.52.1 ID=mRNA_P-littoralis_Contig136.52.1|Name=mRNA_P-littoralis_Contig136.52.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3753bp|location=Sequence derived from alignment at P-littoralis_Contig136:269092..272844- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig136:269092..272844- >mRNA_P-littoralis_Contig136.52.1 ID=mRNA_P-littoralis_Contig136.52.1|Name=mRNA_P-littoralis_Contig136.52.1|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig136:269092..272844- (Pylaiella littoralis U1_48)back to top |