mRNA_P-littoralis_Contig136.22.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI) HSP 1 Score: 370 bits (949), Expect = 8.420e-125 Identity = 178/221 (80.54%), Postives = 201/221 (90.95%), Query Frame = 1
Query: 124 MSSSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKRAASSKKVA 786
M S +K+ YL+ YNLACA GW YVL AC+ HILAG+EPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPW+TT MQVSSRI+L+WGFMWAVPSTQ QLGS+LCITSWACVEIPRYLFYTFGVLKSSP+PLF+LRYSLFAVLYPTGIAGEVMTM+A LPDLK+++DT+RLGVG I +SGY++ L +LA+YVPG P+MYMNMVGNRRSAFKKR A + K A
Sbjct: 1 MGSPIKDVYLIAYNLACASGWSYVLFACVSHILAGNEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKNAQDTLRLGVGPISVSGYIVTLALLAVYVPGGPYMYMNMVGNRRSAFKKRNAGASKKA 221
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA) HSP 1 Score: 214 bits (546), Expect = 4.300e-64 Identity = 109/214 (50.93%), Postives = 146/214 (68.22%), Query Frame = 1
Query: 142 NAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKRAASSKKV 783
+AYL YNLACAGGW + L+ + G+ + ++ + + VQT A+ME+LH+++G+V SPWMTT +QVSSR+V+ WGF+++ ++Q L SWA VE+PRYLFY F ++ + PYPLF+LRYSLFAVLYP+GI GE+MT+V LK K G I IS Y +ALL+LA YVPGAPFMY +MV RR FK+R A+SKK
Sbjct: 5 SAYLGAYNLACAGGWAFALVLFAKAQYEGASWRETWNSMSTTVMAVQTVAVMEILHSLVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVPRYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCLKALKPVPL--AGGISISMYHMALLVLATYVPGAPFMYSHMVTTRRKQFKRRKAASKKA 216
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A7S2U8Y3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8Y3_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.670e-50 Identity = 110/223 (49.33%), Postives = 140/223 (62.78%), Query Frame = 1
Query: 136 LKNAYLVGYNLACAGGWGYVLLACIRHIL-AGSEPQALYDEVEKV------LQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVL-----KSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKRAA 768
LK+AYL+ YN AC GGW YVL + ++ + S P +V V L IVQ+AALME++HA +G+VRSP + T MQV+SRI ++ + P Q Q G+ L + SWA VE+PRY FY +L K +PYPLF+LRYSLFA+LYPTGI GEV +AA D + L S+ I Y L L + IYVPG+P M MNMVGNR+SAFKKR A
Sbjct: 3 LKDAYLIAYNAACCGGWAYVLSLALPSVIGSASSPLEALSQVYAVPNLALVLNIVQSAALMEIVHAAVGLVRSPLVVTAMQVASRIAAIFAISNS-PQAQVQFGAGLMVISWALVEVPRYAFYMAALLTGDATKKTPYPLFWLRYSLFAILYPTGITGEVTVFLAAAKD----DAFLNLYGESLSIIMYYLVLSLPIIYVPGSPVMIMNMVGNRKSAFKKRFA 220
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.050e-49 Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 1
Query: 124 MSSSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAAL------PDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFK 756
M+ L YL+ YNLAC GW YVL C++HI A + + EVE L+IVQTAA++EVLH+M+G+V+SPW T FMQV SR+ LW M + Q + +L TSW VE+PRYLFY +L + PYPLF+LRYSLFAVLYPTGI GE+ TM A ++D ++ + SI +L+ Y+PG+P M+ +MV R F+
Sbjct: 1 MAKGLALVYLLAYNLACCAGWAYVLFICVKHIRAETIADT-WSEVELPLKIVQTAAVLEVLHSMVGLVKSPWATAFMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLLNAVPYPLFWLRYSLFAVLYPTGITGELGTMYHAFNFFITQAPIQDQPLFRQIHLVSI--------VLVAITYIPGSPKMFGHMVKTRSKQFE 208
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A6G0XHX3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHX3_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.740e-49 Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQA----LYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
+KN YL YNLAC GW YVL + + L+ VE L+IVQTAA+ME+LHAM+G+VRSP +T +QVSSR+ LLW VP T+A G ++ +TSW+ VE+PRY FY + + P LFFLRY LF VLYPTGI+GEV M++ALP + + +++ ++ IS + L L +YVPG+PFMY NM R+ A+ K+
Sbjct: 2 IKNLYLTLYNLACCAGWAYVLGLTFQTVNQDRNIDVSAAKLWAIVEIPLKIVQTAAIMEILHAMVGIVRSPVFSTVLQVSSRLALLWMINDLVPETRAHWGFVMMVTSWSLVEVPRYAFYALNLWNAVPDWLFFLRYHLFMVLYPTGISGEVSCMLSALPYVTNGAYAIQMPNDHNVAISLQFMIYLTLVVYVPGSPFMYQNMNNMRKKAYAKK 215
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A2D4CGE6_PYTIN (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGE6_PYTIN) HSP 1 Score: 175 bits (444), Expect = 8.840e-49 Identity = 95/219 (43.38%), Postives = 135/219 (61.64%), Query Frame = 1
Query: 130 SSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEP--------QALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVG-SIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKK 759
++L N YL+ YN A A GW YVL + +LAG E ++ +D VE L++VQ+AA ME+LHA LG+VRSP +TFMQV SR+ L+WG P ++ Q G L + SW VE+PRY FY + P +FFLR LF VLYP+G+ GEV+ M++ALP LK ++L ++ +S Y + +++L IY+PG P MY +M+ R A+ K
Sbjct: 5 NALLNLYLLAYNAASAAGWAYVLFLTVTTVLAGREQGKDWSAISRSTWDTVELPLKVVQSAAFMEILHAALGLVRSPLGSTFMQVGSRLWLVWGINVLCPDSRYQFGFPLMVASWGLVEVPRYTFYALNLFNIVPSFVFFLRXHLFMVLYPSGVGGEVLCMISALPYLKSGAYAVQLPNSLNVAVSLYTVVIMMLIIYIPGLPVMYSHMLTQRNRAYSK 223
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A485KQR1_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQR1_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.470e-47 Identity = 98/214 (45.79%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSE----PQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
+K YLV +NLA GW YVL + + A + Q L+ VE L+IVQT ALMEVLHAMLG+VRSP +TFMQVSSR+ LLW P ++ G +L + SW+ VE+PRY FY +L + P LFFLRY LF VLYP+GI GEV M+ ALP L ++++ ++ IS Y++ ++ L Y+PG+PFM+ +M R+ A+ K+
Sbjct: 2 IKTTYLVLFNLASCLGWAYVLGQTFQLVYADQDIEKSSQTLWGVVEGPLKIVQTMALMEVLHAMLGLVRSPVGSTFMQVSSRLFLLWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGITGEVTCMLKALPLLASGAYSVQMPNTHNVAISLYIVVVITLITYIPGSPFMFNHMNIQRKKAYAKK 215
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.630e-46 Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSE----PQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
+K AYLV +NLA + GW YVL + + A + L+ ++ L++VQT A+ EVLHAMLG+VRSP +T MQVSSR+ L+W P ++ G +L + SW+ VE+PRY FY +L++ P LFFLRY LF VLYP+G+ GEV MV ALP L ++++ +I +S Y++ LL L +Y PG PFMY +M R+ A+ K+
Sbjct: 4 IKTAYLVLFNLASSLGWAYVLGQTFQLVYADQDIALSSAKLWGVIDTPLKVVQTMAVFEVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLSTGAYSIQMPNTHNISVSLYVIVLLTLVVYAPGLPFMYTHMNVQRKKAYAKK 217
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A1I7S9T9_BURXY (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7S9T9_BURXY) HSP 1 Score: 166 bits (421), Expect = 1.910e-45 Identity = 87/201 (43.28%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 148 YLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKD-TMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRR 744
YL GYN GWG VL+ + +LAG +LY+ VE LQI QTAA++E++H+++G+VRSP MTT QV SR+ +LW M+ VPS++A +G + + +W+ E+ RY +Y ++K+ PY L + RY+ F LYP G +GEV+TM+AAL ++K K T+ L +IG S Y + +++ Y+PG P MY M G R+
Sbjct: 13 YLFGYNAVQVVGWGSVLVKTVSGLLAGHSFTSLYENVEWELQIFQTAAILEIVHSLVGLVRSPVMTTVTQVFSRVFVLWAIMYKVPSSRASIGVPMLLIAWSVTEVIRYSYYALNIVKAVPYVLTWARYTFFIALYPLGASGEVITMLAALDEIKRKKHLTLELPNQANIGFSFYYVVIILALYYLPGFPQMYFYMFGQRK 213
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A1V9YMC0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMC0_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.610e-45 Identity = 92/214 (42.99%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQA----LYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
+K AYLV +N+A GW YVL ++ + A L+D + + L+IVQT ALMEV+HA++G+VRSP +TFMQVSSR+ L+W P ++ G +L + SW VE+PRY FY +L + P LFFLRY LF VLYP+G+ GEV M+ +LP L ++ + +I +S Y++ L+I+ IY+PG P MY +M R+ A+ K+
Sbjct: 2 IKTAYLVLFNVASCLGWAYVLGQTLQTLYTDKNIAATSAGLWDIIGEPLKIVQTMALMEVIHALVGLVRSPVGSTFMQVSSRLWLVWAINVLCPESRTHWGFVLMVMSWGLVEVPRYAFYALNLLDAVPNWLFFLRYHLFMVLYPSGVTGEVTCMIKSLPLLASGAYSITMPNTHNIAVSLYVIVLIIMVIYIPGLPIMYSHMNVQRKKAYAKK 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig136.22.1 >prot_P-littoralis_Contig136.22.1 ID=prot_P-littoralis_Contig136.22.1|Name=mRNA_P-littoralis_Contig136.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=222bp MSSSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQback to top mRNA from alignment at P-littoralis_Contig136:137687..141151- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig136.22.1 ID=mRNA_P-littoralis_Contig136.22.1|Name=mRNA_P-littoralis_Contig136.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3465bp|location=Sequence derived from alignment at P-littoralis_Contig136:137687..141151- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig136:137687..141151- >mRNA_P-littoralis_Contig136.22.1 ID=mRNA_P-littoralis_Contig136.22.1|Name=mRNA_P-littoralis_Contig136.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=666bp|location=Sequence derived from alignment at P-littoralis_Contig136:137687..141151- (Pylaiella littoralis U1_48)back to top |