mRNA_P-littoralis_Contig136.22.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig136.22.1
Unique NamemRNA_P-littoralis_Contig136.22.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 8.420e-125
Identity = 178/221 (80.54%), Postives = 201/221 (90.95%), Query Frame = 1
Query:  124 MSSSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKRAASSKKVA 786
            M S +K+ YL+ YNLACA GW YVL AC+ HILAG+EPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPW+TT MQVSSRI+L+WGFMWAVPSTQ QLGS+LCITSWACVEIPRYLFYTFGVLKSSP+PLF+LRYSLFAVLYPTGIAGEVMTM+A LPDLK+++DT+RLGVG I +SGY++ L +LA+YVPG P+MYMNMVGNRRSAFKKR A + K A
Sbjct:    1 MGSPIKDVYLIAYNLACASGWSYVLFACVSHILAGNEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKNAQDTLRLGVGPISVSGYIVTLALLAVYVPGGPYMYMNMVGNRRSAFKKRNAGASKKA 221          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA)

HSP 1 Score: 214 bits (546), Expect = 4.300e-64
Identity = 109/214 (50.93%), Postives = 146/214 (68.22%), Query Frame = 1
Query:  142 NAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKRAASSKKV 783
            +AYL  YNLACAGGW + L+   +    G+  +  ++ +   +  VQT A+ME+LH+++G+V SPWMTT +QVSSR+V+ WGF+++  ++Q      L   SWA VE+PRYLFY F ++ + PYPLF+LRYSLFAVLYP+GI GE+MT+V     LK  K       G I IS Y +ALL+LA YVPGAPFMY +MV  RR  FK+R A+SKK 
Sbjct:    5 SAYLGAYNLACAGGWAFALVLFAKAQYEGASWRETWNSMSTTVMAVQTVAVMEILHSLVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVPRYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCLKALKPVPL--AGGISISMYHMALLVLATYVPGAPFMYSHMVTTRRKQFKRRKAASKKA 216          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A7S2U8Y3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8Y3_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.670e-50
Identity = 110/223 (49.33%), Postives = 140/223 (62.78%), Query Frame = 1
Query:  136 LKNAYLVGYNLACAGGWGYVLLACIRHIL-AGSEPQALYDEVEKV------LQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVL-----KSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKRAA 768
            LK+AYL+ YN AC GGW YVL   +  ++ + S P     +V  V      L IVQ+AALME++HA +G+VRSP + T MQV+SRI  ++    + P  Q Q G+ L + SWA VE+PRY FY   +L     K +PYPLF+LRYSLFA+LYPTGI GEV   +AA  D       + L   S+ I  Y L L +  IYVPG+P M MNMVGNR+SAFKKR A
Sbjct:    3 LKDAYLIAYNAACCGGWAYVLSLALPSVIGSASSPLEALSQVYAVPNLALVLNIVQSAALMEIVHAAVGLVRSPLVVTAMQVASRIAAIFAISNS-PQAQVQFGAGLMVISWALVEVPRYAFYMAALLTGDATKKTPYPLFWLRYSLFAILYPTGITGEVTVFLAAAKD----DAFLNLYGESLSIIMYYLVLSLPIIYVPGSPVMIMNMVGNRKSAFKKRFA 220          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.050e-49
Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 1
Query:  124 MSSSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAAL------PDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFK 756
            M+  L   YL+ YNLAC  GW YVL  C++HI A +     + EVE  L+IVQTAA++EVLH+M+G+V+SPW T FMQV SR+  LW  M    + Q  +  +L  TSW  VE+PRYLFY   +L + PYPLF+LRYSLFAVLYPTGI GE+ TM  A         ++D     ++ + SI        +L+   Y+PG+P M+ +MV  R   F+
Sbjct:    1 MAKGLALVYLLAYNLACCAGWAYVLFICVKHIRAETIADT-WSEVELPLKIVQTAAVLEVLHSMVGLVKSPWATAFMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLLNAVPYPLFWLRYSLFAVLYPTGITGELGTMYHAFNFFITQAPIQDQPLFRQIHLVSI--------VLVAITYIPGSPKMFGHMVKTRSKQFE 208          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A6G0XHX3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHX3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.740e-49
Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 1
Query:  136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQA----LYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
            +KN YL  YNLAC  GW YVL    + +            L+  VE  L+IVQTAA+ME+LHAM+G+VRSP  +T +QVSSR+ LLW     VP T+A  G ++ +TSW+ VE+PRY FY   +  + P  LFFLRY LF VLYPTGI+GEV  M++ALP + +    +++    ++ IS   +  L L +YVPG+PFMY NM   R+ A+ K+
Sbjct:    2 IKNLYLTLYNLACCAGWAYVLGLTFQTVNQDRNIDVSAAKLWAIVEIPLKIVQTAAIMEILHAMVGIVRSPVFSTVLQVSSRLALLWMINDLVPETRAHWGFVMMVTSWSLVEVPRYAFYALNLWNAVPDWLFFLRYHLFMVLYPTGISGEVSCMLSALPYVTNGAYAIQMPNDHNVAISLQFMIYLTLVVYVPGSPFMYQNMNNMRKKAYAKK 215          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A2D4CGE6_PYTIN (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGE6_PYTIN)

HSP 1 Score: 175 bits (444), Expect = 8.840e-49
Identity = 95/219 (43.38%), Postives = 135/219 (61.64%), Query Frame = 1
Query:  130 SSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEP--------QALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRLGVG-SIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKK 759
            ++L N YL+ YN A A GW YVL   +  +LAG E         ++ +D VE  L++VQ+AA ME+LHA LG+VRSP  +TFMQV SR+ L+WG     P ++ Q G  L + SW  VE+PRY FY   +    P  +FFLR  LF VLYP+G+ GEV+ M++ALP LK     ++L    ++ +S Y + +++L IY+PG P MY +M+  R  A+ K
Sbjct:    5 NALLNLYLLAYNAASAAGWAYVLFLTVTTVLAGREQGKDWSAISRSTWDTVELPLKVVQSAAFMEILHAALGLVRSPLGSTFMQVGSRLWLVWGINVLCPDSRYQFGFPLMVASWGLVEVPRYTFYALNLFNIVPSFVFFLRXHLFMVLYPSGVGGEVLCMISALPYLKSGAYAVQLPNSLNVAVSLYTVVIMMLIIYIPGLPVMYSHMLTQRNRAYSK 223          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A485KQR1_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQR1_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.470e-47
Identity = 98/214 (45.79%), Postives = 135/214 (63.08%), Query Frame = 1
Query:  136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSE----PQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
            +K  YLV +NLA   GW YVL    + + A  +     Q L+  VE  L+IVQT ALMEVLHAMLG+VRSP  +TFMQVSSR+ LLW      P ++   G +L + SW+ VE+PRY FY   +L + P  LFFLRY LF VLYP+GI GEV  M+ ALP L     ++++    ++ IS Y++ ++ L  Y+PG+PFM+ +M   R+ A+ K+
Sbjct:    2 IKTTYLVLFNLASCLGWAYVLGQTFQLVYADQDIEKSSQTLWGVVEGPLKIVQTMALMEVLHAMLGLVRSPVGSTFMQVSSRLFLLWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGITGEVTCMLKALPLLASGAYSVQMPNTHNVAISLYIVVVITLITYIPGSPFMFNHMNIQRKKAYAKK 215          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.630e-46
Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 1
Query:  136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSE----PQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
            +K AYLV +NLA + GW YVL    + + A  +       L+  ++  L++VQT A+ EVLHAMLG+VRSP  +T MQVSSR+ L+W      P ++   G +L + SW+ VE+PRY FY   +L++ P  LFFLRY LF VLYP+G+ GEV  MV ALP L     ++++    +I +S Y++ LL L +Y PG PFMY +M   R+ A+ K+
Sbjct:    4 IKTAYLVLFNLASSLGWAYVLGQTFQLVYADQDIALSSAKLWGVIDTPLKVVQTMAVFEVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLSTGAYSIQMPNTHNISVSLYVIVLLTLVVYAPGLPFMYTHMNVQRKKAYAKK 217          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A1I7S9T9_BURXY (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7S9T9_BURXY)

HSP 1 Score: 166 bits (421), Expect = 1.910e-45
Identity = 87/201 (43.28%), Postives = 130/201 (64.68%), Query Frame = 1
Query:  148 YLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKD-TMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRR 744
            YL GYN     GWG VL+  +  +LAG    +LY+ VE  LQI QTAA++E++H+++G+VRSP MTT  QV SR+ +LW  M+ VPS++A +G  + + +W+  E+ RY +Y   ++K+ PY L + RY+ F  LYP G +GEV+TM+AAL ++K  K  T+ L    +IG S Y + +++   Y+PG P MY  M G R+
Sbjct:   13 YLFGYNAVQVVGWGSVLVKTVSGLLAGHSFTSLYENVEWELQIFQTAAILEIVHSLVGLVRSPVMTTVTQVFSRVFVLWAIMYKVPSSRASIGVPMLLIAWSVTEVIRYSYYALNIVKAVPYVLTWARYTFFIALYPLGASGEVITMLAALDEIKRKKHLTLELPNQANIGFSFYYVVIILALYYLPGFPQMYFYMFGQRK 213          
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Match: A0A1V9YMC0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMC0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.610e-45
Identity = 92/214 (42.99%), Postives = 134/214 (62.62%), Query Frame = 1
Query:  136 LKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQA----LYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQLGSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAGEVMTMVAALPDLKDSKDTMRL-GVGSIGISGYMLALLILAIYVPGAPFMYMNMVGNRRSAFKKR 762
            +K AYLV +N+A   GW YVL   ++ +       A    L+D + + L+IVQT ALMEV+HA++G+VRSP  +TFMQVSSR+ L+W      P ++   G +L + SW  VE+PRY FY   +L + P  LFFLRY LF VLYP+G+ GEV  M+ +LP L     ++ +    +I +S Y++ L+I+ IY+PG P MY +M   R+ A+ K+
Sbjct:    2 IKTAYLVLFNVASCLGWAYVLGQTLQTLYTDKNIAATSAGLWDIIGEPLKIVQTMALMEVIHALVGLVRSPVGSTFMQVSSRLWLVWAINVLCPESRTHWGFVLMVMSWGLVEVPRYAFYALNLLDAVPNWLFFLRYHLFMVLYPSGVTGEVTCMIKSLPLLASGAYSITMPNTHNIAVSLYVIVLIIMVIYIPGLPIMYSHMNVQRKKAYAKK 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN17_ECTSI8.420e-12580.54Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A835ZGJ3_9STRA4.300e-6450.93Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S2U8Y3_9STRA2.670e-5049.33Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S3HHK7_9STRA1.050e-4945.62Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A6G0XHX3_9STRA2.740e-4946.26Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2D4CGE6_PYTIN8.840e-4943.38Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A485KQR1_9STRA4.470e-4745.79Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A024TZ79_9STRA3.630e-4643.93Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1I7S9T9_BURXY1.910e-4543.28Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1V9YMC0_9STRA2.610e-4542.99Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig136contigP-littoralis_Contig136:137687..141151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FN17
PFAMsPTPLA
Model size1325
Max annot lvl2759|Eukaryota
KEGG rclassRC00770,RC01095
KEGG koko:K10703
KEGG ReactionR07760,R10827
KEGG Pathwayko00062,ko01040,ko01110,ko01212,map00062,map01040,map01110,map01212
KEGG ModuleM00415
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.96e-129
EggNOG OGsCOG5198@1|root,KOG3187@2759|Eukaryota
Ec32 ortholog descriptionPutative tyrosine phosphatase
Ec32 orthologEc-25_001190.1
EC4.2.1.134
Description3-hydroxy-lignoceroyl-CoA dehydratase activity
Cds size666
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig136.22.1prot_P-littoralis_Contig136.22.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig136 138223..141028 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789627.9312675-UTR-P-littoralis_Contig136:137686..1382221680789627.9312675-UTR-P-littoralis_Contig136:137686..138222Pylaiella littoralis U1_48UTRP-littoralis_Contig136 137687..138222 -
1680789627.9875362-UTR-P-littoralis_Contig136:141028..1411511680789627.9875362-UTR-P-littoralis_Contig136:141028..141151Pylaiella littoralis U1_48UTRP-littoralis_Contig136 141029..141151 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789627.9495773-CDS-P-littoralis_Contig136:138222..1383991680789627.9495773-CDS-P-littoralis_Contig136:138222..138399Pylaiella littoralis U1_48CDSP-littoralis_Contig136 138223..138399 -
1680789627.958748-CDS-P-littoralis_Contig136:139028..1391701680789627.958748-CDS-P-littoralis_Contig136:139028..139170Pylaiella littoralis U1_48CDSP-littoralis_Contig136 139029..139170 -
1680789627.9692304-CDS-P-littoralis_Contig136:139327..1394971680789627.9692304-CDS-P-littoralis_Contig136:139327..139497Pylaiella littoralis U1_48CDSP-littoralis_Contig136 139328..139497 -
1680789627.9775507-CDS-P-littoralis_Contig136:140851..1410281680789627.9775507-CDS-P-littoralis_Contig136:140851..141028Pylaiella littoralis U1_48CDSP-littoralis_Contig136 140852..141028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig136.22.1

>prot_P-littoralis_Contig136.22.1 ID=prot_P-littoralis_Contig136.22.1|Name=mRNA_P-littoralis_Contig136.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=222bp
MSSSLKNAYLVGYNLACAGGWGYVLLACIRHILAGSEPQALYDEVEKVLQ
IVQTAALMEVLHAMLGVVRSPWMTTFMQVSSRIVLLWGFMWAVPSTQAQL
GSLLCITSWACVEIPRYLFYTFGVLKSSPYPLFFLRYSLFAVLYPTGIAG
EVMTMVAALPDLKDSKDTMRLGVGSIGISGYMLALLILAIYVPGAPFMYM
NMVGNRRSAFKKRAASSKKVA*
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mRNA from alignment at P-littoralis_Contig136:137687..141151-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig136.22.1 ID=mRNA_P-littoralis_Contig136.22.1|Name=mRNA_P-littoralis_Contig136.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3465bp|location=Sequence derived from alignment at P-littoralis_Contig136:137687..141151- (Pylaiella littoralis U1_48)
CACACCACACACAGCGCAAACTGGTCCCCCATATGATACACTGCAGTATC TCTTTGGGTGAAGCCTGAATGCTGTGATAAGTTTCTGCAACGGACGTATC TCGTATTGCGGAAGGGAAATCCCATGTCTTCCTCTTTGAAGAATGCGTAT CTCGTCGGATACAACCTCGCATGCGCCGGGGGCTGGGGCTACGTGCTCCT GGCATGCATCAGGCACATCCTGGCCGGGAGCGAGCCGCAGGCGCTGTACG ATGAGGTCGAGAAAGTGCTTCAAATCGTGCAGACCGCTGCTTTGATGGAG GTGAAATGTGCTTGGTGGTGCTATCAAAGTTGCCACAGCAGCAGGGTGGT CTTTTTTTTCCTCAACGTTTCCGTGAGGACTGCTGGCTTTGGGACTTGTC ATGTTTTGGTACGACCGTAGATATCATAGGTGTCCATGAGCGCATGCCAT CGTGGTGCTACAGAATATTGTATATACGATGTATAGGTTGTGCGCCAGCC AAGTGCGGATCATAACGCATGGAACCACTGCTGTTGGGGTGCTTACGAAG GGGGGCGGTTGGTGGGTACCCCTTTTTCCACTAATATCATATGCGTTGCG TTCGCGCTGGCTTTATTTCGCCGCACTTTGACGGCATCGGCACAACGGGG CGCGTCATGGACGAGGTCAACCCTACAGCGAAATGGTTTTCACGCTTTTC ACGCGCTCTGGAGCCTGAAGGCTTTGTAGGGTCCAATACGACCGCCCTTC TGCTTGGAAGGCACATAGCAGGGAGTGTCGGAGCTCGACTTGCAGTCGAC CTGTGCCCGGGCGGGCTCGTGGGCTCCCCCGCGGCAAGCGGATGTTTACG TAGATGAAGTCCTACAAAATATGTCATGCCACGGTCAGTTCGTGCGACTT TGATGCGCATGTCTGGATGTGACTGCTTTTCACTCCAGCGAATAATAACG CCGCTTACCAGTGTGATTGCGCCGCATATTGAAGACAGCAGTGGGTGGGC TCCTACTCTACTCCGCTTGAAACACCAGTATTTCACGAGCTATATTGCCC TGCAGCATGAATTATTGACAGCATCTAGCAAGTAAGTGGGTGGGAGGTGG GAGGTCCACGAACAACCTAGATCGGGTTGCTCCAAAATGGGTATCATGGG TGACCACATCGCAGAGCTTCATACACAGCAGTTGGTGAAGTTTGGCCTCA TTCTTGGTGAGCTGGAAGCAAGAGAATTTTCCTACGCTGAGGAGCGCCGC AAGGGAGTTCAAACTGAAGCTCTGATTCTGGCTGAGCTGATGCGGTCCAA CTCTGTCTTGAGGTTTGAAACCGAACCTCGAGTGTATTTGTCGGCAGGTA AAATGGTGTTTCACGTTGCATGTGTTCCGTGGAACGCGATGTTCAGATTT TGAAGGTTTCTAGCACTGAGCCGGCGATCTCGTTTCACCCGTAACAATAA CTTCCTTGTATCAGCAAGGCAACGGAGGCAGATGCGTTTACGGCTGAAGG AGTATACCCACAGACTCTACAAGAGCTGATGCCCGAGTAAGCAAAGGCCA AGAGTGCATTTTGATGCACCACGTTTCGTTTTCTCCCTGTTGCTGTGCCT GCCCTCTACGCTTTTTGGTCACTCCGCTCCCTCTCCACCCGCCCGCGCGT GAAGGTCCTCCACGCGATGCTTGGCGTTGTCCGCTCCCCATGGATGACAA CCTTTATGCAAGTGAGCTCGAGAATCGTCCTGCTGTGGGGCTTTATGTGG GCAGTGCCGTCCACCCAGGCGCAGCTAGGCTCCTTGCTGTGCATCACAAG CTGGGCGTGCGTCGAAATCCCGAGGTACGACGGAGCACACAGCGAAAACG ACGACTCTGTCGCTTTTTATGGGGTCTAAATATCGAAACTCGCATGACAT TGTTTTCTTCTTTTTCACGTCACCACGGTTGCTGTCTTGGTGGGCTTTTT TTTTCTTTTGGGGGTGGGGGCATGTGCGCAGGTACCTGTTCTACACGTTC GGCGTGCTGAAAAGCTCCCCGTACCCTCTTTTCTTCCTGCGATACTCCCT GTTTGCCGTCCTCTACCCCACTGGAATCGCGGGCGAGGTCATGACCATGG TGGCTGCTCTTCCGGATCTAAAGGTATGATGTGTATGTCAGGTCAACAAA TTTTCGACCCTCTAAGCCCGAGAGAGCTGAATCGGAGGGGGAGTTGCTGA TTACATATCGTAAACCTGGTACCGGTACCAATTTTCACAATACACACAGC TTGGCGTATGTGCCTCTGCACCCATTGTGGGAAAACAAGACTTTGAAAAT CATTTTAACCCCCACATGGGAAATTCAAACGACGTTATTTTATGCAGGTG CATCCTCCCTCTCCCCACCCCCCTCCCACCCGCCGGCGACGAACACGCAA ACTGACGGGGTATATGGGCTTGGTGTGTAATTGTGCGATGTGTTTCCGTT TTTTTCTGGTCTCACCTAGCGTTCGGCTTGCGGTAGTAGGATCACCAGCT AGATCACTGCTGTCGCTGCGACGCCACAACTGATTTTCCTCGCGACACCG TAGCTTTGCAACTGTTTATCTGTCTCGTTCGTGCTTCACTCACCCACACG TGTCGTTGGATACGCTTGGAAATGGTTCCTGATTGGAAGCCGTGGCTGTC TGTTGCTACATGCCTTGACTATCGACACTGACCCCCTTCACGTTCGGGAG TTCCACCTCGGCCGTTTTTCTTGTATTGTTTCACCCCTTCCTCCTTCTCC AGGATTCCAAGGACACCATGCGGCTAGGTGTGGGATCCATCGGCATCTCC GGCTACATGTTGGCACTGCTCATCCTGGCCATTTACGTGCCAGGCGCACC ATTCATGTACATGAACATGGTGGGCAACCGGCGTTCGGCCTTCAAAAAGC GAGCCGCCTCGTCGAAGAAGGTGGCATAAATTGCCCACTTTCGAGCTGGA TTTACCTGATGGGCACATGCTGGCTTGGAGCATGTAGCAACAGCAGTCCA TGAGAGAGATGTATCGTAAAGTTGATGTTAGGAGGCCAACAATGAACTGG TATTGGAAAGATTTTTGAACTTGGCGTTTTTGGCGTACTGACACTACGTC TCCGTTCTCATCATAGAGGTGCAATTCGCGCCTCGCTGGGGAGCGGGGCT GCTTGGAGGATGGCCGGATGTACTCATCGTTCGTATGTCCTCTTCGACGG TAGGTTACTCTAAGTTTACAGGGCATACGGAGAATGCGATCACGGGGTCA GAAATGGATACCAGGTACTTGTATGGAGCACAGCAATATTTCGGTAAAGA ATGGTTTCACATAATTTCCCGCAGGATTTGCTCTCGAGCTCGTTTGACTT CGCGGCGAGGAGCGGCAAATGTTTTTGTGTACTGCTGTACAGCAGTTACT CCGCTGTTTTTTGTTCTATGCAAACTTTTCTGGCCCTGCAGATCCAGAAA ATAAACCCTTCTAGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig136:137687..141151-

>mRNA_P-littoralis_Contig136.22.1 ID=mRNA_P-littoralis_Contig136.22.1|Name=mRNA_P-littoralis_Contig136.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=666bp|location=Sequence derived from alignment at P-littoralis_Contig136:137687..141151- (Pylaiella littoralis U1_48)
ATGTCTTCCTCTTTGAAGAATGCGTATCTCGTCGGATACAACCTCGCATG
CGCCGGGGGCTGGGGCTACGTGCTCCTGGCATGCATCAGGCACATCCTGG
CCGGGAGCGAGCCGCAGGCGCTGTACGATGAGGTCGAGAAAGTGCTTCAA
ATCGTGCAGACCGCTGCTTTGATGGAGGTCCTCCACGCGATGCTTGGCGT
TGTCCGCTCCCCATGGATGACAACCTTTATGCAAGTGAGCTCGAGAATCG
TCCTGCTGTGGGGCTTTATGTGGGCAGTGCCGTCCACCCAGGCGCAGCTA
GGCTCCTTGCTGTGCATCACAAGCTGGGCGTGCGTCGAAATCCCGAGGTA
CCTGTTCTACACGTTCGGCGTGCTGAAAAGCTCCCCGTACCCTCTTTTCT
TCCTGCGATACTCCCTGTTTGCCGTCCTCTACCCCACTGGAATCGCGGGC
GAGGTCATGACCATGGTGGCTGCTCTTCCGGATCTAAAGGATTCCAAGGA
CACCATGCGGCTAGGTGTGGGATCCATCGGCATCTCCGGCTACATGTTGG
CACTGCTCATCCTGGCCATTTACGTGCCAGGCGCACCATTCATGTACATG
AACATGGTGGGCAACCGGCGTTCGGCCTTCAAAAAGCGAGCCGCCTCGTC
GAAGAAGGTGGCATAA
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