mRNA_P-littoralis_Contig1351.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A1E3GXS9_9HYPH (Uncharacterized protein n=2 Tax=Methylobrevis pamukkalensis TaxID=1439726 RepID=A0A1E3GXS9_9HYPH) HSP 1 Score: 68.6 bits (166), Expect = 1.050e-11 Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVVRTLS 416
F A P YVPAYGGH A+AAA G V P+ F +R+FLF S R +L +A LI AD+ WP ++ +L+
Sbjct: 98 FAAAPAVYVPAYGGHSAVAAAAGFPVPGAPEFFAIRDNRLFLFSSAQQRDQWLKDAARLIAEADARWPVIIESLA 172
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A833GH96_9HYPH (Uncharacterized protein n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GH96_9HYPH) HSP 1 Score: 67.0 bits (162), Expect = 2.370e-11 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVVRTLSP 419
F A PE Y+P +GG+ A G+A P +++ R++LF S AAR F +A+ ++ RA+S WP+V+RTL P
Sbjct: 72 FAAGPEIYMPQFGGYDPTGIARGVATPGHPQLWLIHDRRLYLFYSDAARNDFAADADAILARAESRWPEVLRTLVP 147
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A257HGU3_9HYPH (YHS domain-containing protein n=1 Tax=Rhizobiales bacterium PAR1 TaxID=2015577 RepID=A0A257HGU3_9HYPH) HSP 1 Score: 67.0 bits (162), Expect = 5.050e-11 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVVRTLSP 419
F ++P Y+PA+GGH +A A G ++ P+ F G RV+LFR P +R AFL + E + T A+S WP V R L P
Sbjct: 112 FLSNPTNYLPAFGGHDPVAIAAGFVLAGSPEFFAIAGQRVYLFRHPESRDAFLQDPE-IGTTAESQWPQVKRHLVP 186
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A363TEI4_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TEI4_9BRAD) HSP 1 Score: 63.5 bits (153), Expect = 6.920e-10 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVVRTLSP 419
F ADP+ Y+P +GG+ + A G+A PD++V G+R++LF + R +F +I A+ WPD++R L+P
Sbjct: 88 FAADPDIYMPRFGGYDPVGVARGVATPGHPDLWVRAGNRLYLFHTAEDRDSFAKNPAPMIGAAEVRWPDLLRVLAP 163
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A346A4A2_9HYPH (Uncharacterized protein n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A4A2_9HYPH) HSP 1 Score: 62.0 bits (149), Expect = 1.670e-9 Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVVR 407
F A+PE Y+P +GG+ +A G AV P I+ G R++LF S A R AF+ +A+ ++ A WPDV R
Sbjct: 64 FVANPEVYMPQFGGYDPVAIERGRAVPGHPLIWTVTGDRLYLFYSDADRAAFIADADRIVAAATRKWPDVAR 135
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: UPI001647BED0 (YHS domain protein n=1 Tax=Bosea sp. CS1GBMeth4 TaxID=1892849 RepID=UPI001647BED0) HSP 1 Score: 62.4 bits (150), Expect = 1.800e-9 Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3
Query: 189 LFGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWP 395
LF ADP+RY+PAYGG CA + G V +P+ + +G R+FL + ++L +T I RAD+ WP
Sbjct: 84 LFEADPQRYLPAYGGFCAYGTSRGYLVKIEPEAWSIVGGRLFLNYDLGVKDSWLRRTKTYIARADAGWP 152
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A1D7U1S9_9HYPH (Uncharacterized protein n=2 Tax=Bosea TaxID=85413 RepID=A0A1D7U1S9_9HYPH) HSP 1 Score: 62.0 bits (149), Expect = 2.430e-9 Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 3
Query: 189 LFGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDV 401
LF ADP+RY+PAYGG CA + G V +P+ + + R++L R +L + +T I RAD+ WP +
Sbjct: 82 LFEADPQRYLPAYGGFCAYGTSRGYLVKIEPEAWSIVNGRLYLNYDLGVRKTWLAKTQTYIARADANWPKL 152
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: UPI0008D9CBE1 (YHS domain-containing protein n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0008D9CBE1) HSP 1 Score: 60.8 bits (146), Expect = 5.530e-9 Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDV 401
F ADPERY PAYGGHCA A AEG + P+ + G R++L + + + + + I A+ WP+V
Sbjct: 77 FRADPERYAPAYGGHCAYAVAEGYTAAGDPEHWTIHGGRLYLNYNAEVQTRWEADRDDYIAAANDNWPEV 146
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: A0A1E3C7B7_9GAMM (Twin-arginine translocation pathway signal protein n=5 Tax=Marinobacter TaxID=2742 RepID=A0A1E3C7B7_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 1.070e-8 Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVV 404
F A+PERY+P YGG+CA A A+G P+ + R++L + + +Y +L E I +AD+ WP V+
Sbjct: 76 FEANPERYLPVYGGYCAWAVAQGYLAKGDPEHWAIRDGRLYLNYNQSVQYRWLKNTEGFIRQADANWPKVL 146
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Match: UPI00123C56F2 (hypothetical protein n=1 Tax=Rhabdaerophilum calidifontis TaxID=2604328 RepID=UPI00123C56F2) HSP 1 Score: 60.1 bits (144), Expect = 1.460e-8 Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 3
Query: 192 FGADPERYVPAYGGHCALAAAEGMAVSAQPDIFVTMGSRVFLFRSPAARYAFLLEAETLITRADSLWPDVVRTLSP 419
F A+P+ Y+P +GG+ A A G AV+ P++F+ + R++LFR P +R AFL + A + WP V R L P
Sbjct: 90 FLAEPQSYLPVFGGYDPAAIAAGFAVAGSPELFLILDERIYLFRKPESREAFLRDPAIREAAARN-WPQVKRDLVP 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1351.1.1 >prot_P-littoralis_Contig1351.1.1 ID=prot_P-littoralis_Contig1351.1.1|Name=mRNA_P-littoralis_Contig1351.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=97bp MSCCIRDLSGALPIGNETCLFGADPERYVPAYGGHCALAAAEGMAVSAQPback to top mRNA from alignment at P-littoralis_Contig1351:316..737- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1351.1.1 ID=mRNA_P-littoralis_Contig1351.1.1|Name=mRNA_P-littoralis_Contig1351.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=422bp|location=Sequence derived from alignment at P-littoralis_Contig1351:316..737- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1351:316..737- >mRNA_P-littoralis_Contig1351.1.1 ID=mRNA_P-littoralis_Contig1351.1.1|Name=mRNA_P-littoralis_Contig1351.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=291bp|location=Sequence derived from alignment at P-littoralis_Contig1351:316..737- (Pylaiella littoralis U1_48)back to top |