mRNA_P-littoralis_Contig1347.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 304 bits (778), Expect = 7.250e-96 Identity = 149/305 (48.85%), Postives = 209/305 (68.52%), Query Frame = 1
Query: 157 PWRKEGVDGLYFDRDADS-YDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
PWR++G G +FDR A + N+ G PVFSTG+A SSD FNY+S GK Y+VNAT+V L CLSPALLRRLRSW L G G WE +V LM+ I+ L+ GC+A + D ++T VRMGLLTA LD+P HS W+N K N+KT++ C C V +++L + +Y+I N R+ DG+ + L V + + +Q + SR GVVVP NPL ++ FDRV G G+D+LHQ +LN K+++ F+L+AL++ GS +V GR R ++PPN P+ D+T+ GG++ALTG Q+W++SSI P L PIF++
Sbjct: 3 PWRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSH 307
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 196 bits (499), Expect = 2.540e-54 Identity = 94/213 (44.13%), Postives = 138/213 (64.79%), Query Frame = 1
Query: 427 METIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
M+ I+ L+ GC+A D +VT VR+GLLTA LD+P HS W+N K N+KT++ C C V + +L + +Y+I N RT DG+ + L V A + D+ + SR GVVVP NP ++ FDRV G G+DILHQ +LN K+++ F+++AL+ GS +V R ++PPN P+ D+T+ GG+SALTG Q+W++SS P L PIF++
Sbjct: 1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSS 213
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI) HSP 1 Score: 169 bits (428), Expect = 4.410e-43 Identity = 106/314 (33.76%), Postives = 166/314 (52.87%), Query Frame = 1
Query: 157 PWRKEGVDGLYFDR--DADSYDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVA-LSCLSPALLRRLRSWSLV-CAGSKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDSLNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMV 1080
P + G ++DR + ++N VF T + +D F++ + GG Y + AT ++ + S A R+ +W LV + + RW++++G ++E I L+KGCRAR+ D VF R+GLL D+P K +KT PC C + QE+L+D Y+I N RT D + +L + T + S + GV +V+NP +K V + VR G+D+ HQD+ N +++ + LL L+ G L+S K S+ PL D +DGGFSAL+G +W LSS+ L+FRP+ + SMV
Sbjct: 449 PGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVE-EVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMV 761
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 144 bits (364), Expect = 2.630e-37 Identity = 84/248 (33.87%), Postives = 127/248 (51.21%), Query Frame = 1
Query: 490 SVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVD--------------------------------------------------ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMVS 1083
+V VR+GLLTA LD+P HS W+N K N+KT C C V + +L + +Y+I N RT DG+ + L V A + D+ + SR GVVVP NPL ++ DRV G G+D + + +LN K+++ F+++AL+ G+ +V R R ++PPN P+ D+T+ GG SALTG Q+W+++SI P L PIF++ ++VS
Sbjct: 19 NVEALVRLGLLTANLDSPMHSLWANQKHHNAKTT--CQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMDGTQMPQVHIGRVADLVSQFSYTHKRDHIALLICSQNEQSDARITSQAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNLVS 264
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 150 bits (378), Expect = 3.110e-36 Identity = 105/354 (29.66%), Postives = 167/354 (47.18%), Query Frame = 1
Query: 58 DMTSQELNEQVPTFLGEGFV--------TFLTNPRRVKEQRPWRKEGVDGLYFDR--DADSYDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVA-LSCLSPALLRRLRSWSLV-CAGSKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDSLNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSM 1077
D+ + E +P+F G GFV T L +P + PWR EG + L++DR + ++N VF T + +D F++ + GG Y + AT ++ + S A R+ +W LV + + RW++++G ++E I L+KGCRAR+ D +E+L+D Y+I N RT D + +L + T + S + GV +V+NP +K V + VR G+D+ HQD+ N ++ + LL L+ G L+S K S+ PL D +DGGFSAL+G +W LSS+ L+FRP+ + SM
Sbjct: 356 DVHTGEDGSALPSFRGVGFVKRLRSGRHTPLPSPDPAVKHLPWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIAD-------------------------------------------KVEEDLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASM 666
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.930e-30 Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 664 RTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
R DG+ + L V + + + SR GVVVP NPL ++ FDRV G G+D+LHQ +LN K+++ F+L+AL++ GS +V GR R ++PPN P+ D+T+ GG++ALTG Q+W++SSI P L PIF++
Sbjct: 69 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSH 202
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.100e-24 Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 1
Query: 547 HSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
HS W+N K N+KT++ C C V + +L + +Y+I D+ + SR GVVVP NPL ++ FDRV G G+DILHQ +LN K+++ F+++AL+ GS +V D+T+ GG SALTG Q+W++SSI+P L PIF++
Sbjct: 2 HSLWANQKHHNAKTERACQACVVPRRDLGNPKYDI-----------------------KDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVP-----------------DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSS 134
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5JE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE27_9PHAE) HSP 1 Score: 111 bits (277), Expect = 3.340e-23 Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 1
Query: 391 SKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSL 846
SK R +++V + E E G S V VR GL +LD+P HS +NTK +N T + C C+V + L + +Y+I N RT +G+D + YVK G T ++ R+++RGVVVP V NPLKKL FDR + DILH DSL
Sbjct: 426 SKRRRDQDVESVWEVTNQEENV---------GVSALVLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRRHLGNPRYDIRQNRRTAEGVDADIEYVKQGATKTERVERAKQRGVVVPKVSNPLKKLTFDRQLQVPFDILHADSL 568
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5JXS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS6_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.030e-15 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 259 SSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVT 498
SSD FNY+S G+ ++V+AT+V L CLSP LLRRLRSW L G G WE ++ LME I+ L+ GC+ + D +VT
Sbjct: 60 SSDAFNYFSLSGRKHSVSATFVGLGCLSPTLLRRLRSWYLATLGLPGAAWELDILPLMEIIRWLQNGCKTEISIGDKQTVT 140
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 4.970e-13 Identity = 35/80 (43.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 826 ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
+L Q +LN K+++ F+L+AL++ S +V GR R ++P N P+ D+T+ GG++ALTG Q+W++SSI P L PIF++
Sbjct: 4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSH 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1347.7.1 >prot_P-littoralis_Contig1347.7.1 ID=prot_P-littoralis_Contig1347.7.1|Name=mRNA_P-littoralis_Contig1347.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=363bp VKVQVDALDAPCLVLPAGTDMTSQELNEQVPTFLGEGFVTFLTNPRRVKEback to top mRNA from alignment at P-littoralis_Contig1347:23706..25538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1347.7.1 ID=mRNA_P-littoralis_Contig1347.7.1|Name=mRNA_P-littoralis_Contig1347.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1833bp|location=Sequence derived from alignment at P-littoralis_Contig1347:23706..25538+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1347:23706..25538+ >mRNA_P-littoralis_Contig1347.7.1 ID=mRNA_P-littoralis_Contig1347.7.1|Name=mRNA_P-littoralis_Contig1347.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1089bp|location=Sequence derived from alignment at P-littoralis_Contig1347:23706..25538+ (Pylaiella littoralis U1_48)back to top |