mRNA_P-littoralis_Contig1347.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1347.7.1
Unique NamemRNA_P-littoralis_Contig1347.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 7.250e-96
Identity = 149/305 (48.85%), Postives = 209/305 (68.52%), Query Frame = 1
Query:  157 PWRKEGVDGLYFDRDADS-YDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
            PWR++G  G +FDR A   + N+ G PVFSTG+A SSD FNY+S  GK Y+VNAT+V L CLSPALLRRLRSW L   G  G  WE +V  LM+ I+ L+ GC+A +   D  ++T  VRMGLLTA LD+P HS W+N K  N+KT++ C  C V +++L + +Y+I  N R+ DG+ + L  V + +   +Q + SR  GVVVP   NPL ++ FDRV G G+D+LHQ +LN  K+++ F+L+AL++ GS +V GR   R ++PPN  P+ D+T+ GG++ALTG Q+W++SSI P L  PIF++
Sbjct:    3 PWRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSH 307          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 2.540e-54
Identity = 94/213 (44.13%), Postives = 138/213 (64.79%), Query Frame = 1
Query:  427 METIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
            M+ I+ L+ GC+A     D  +VT  VR+GLLTA LD+P HS W+N K  N+KT++ C  C V + +L + +Y+I  N RT DG+ + L  V A +   D+ + SR  GVVVP   NP  ++ FDRV G G+DILHQ +LN  K+++ F+++AL+  GS +V  R     ++PPN  P+ D+T+ GG+SALTG Q+W++SS  P L  PIF++
Sbjct:    1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSS 213          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 4.410e-43
Identity = 106/314 (33.76%), Postives = 166/314 (52.87%), Query Frame = 1
Query:  157 PWRKEGVDGLYFDR--DADSYDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVA-LSCLSPALLRRLRSWSLV-CAGSKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDSLNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMV 1080
            P  + G    ++DR  +   ++N     VF T   + +D F++ + GG  Y + AT ++  +  S A  R+  +W LV  +  + RW++++G ++E I  L+KGCRAR+   D     VF R+GLL    D+P        K   +KT  PC  C + QE+L+D  Y+I  N RT D  + +L  +    T   +   S + GV   +V+NP +K V  + VR  G+D+ HQD+ N  +++ + LL  L+   G  L+S   K  S+      PL D  +DGGFSAL+G  +W LSS+  L+FRP+  +  SMV
Sbjct:  449 PGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVE-EVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMV 761          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.630e-37
Identity = 84/248 (33.87%), Postives = 127/248 (51.21%), Query Frame = 1
Query:  490 SVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVD--------------------------------------------------ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMVS 1083
            +V   VR+GLLTA LD+P HS W+N K  N+KT   C  C V + +L + +Y+I  N RT DG+ + L  V A +   D+ + SR  GVVVP   NPL ++  DRV G G+D                                                  +  + +LN  K+++ F+++AL+  G+ +V  R   R ++PPN  P+ D+T+ GG SALTG Q+W+++SI P L  PIF++  ++VS
Sbjct:   19 NVEALVRLGLLTANLDSPMHSLWANQKHHNAKTT--CQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMDGTQMPQVHIGRVADLVSQFSYTHKRDHIALLICSQNEQSDARITSQAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNLVS 264          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 3.110e-36
Identity = 105/354 (29.66%), Postives = 167/354 (47.18%), Query Frame = 1
Query:   58 DMTSQELNEQVPTFLGEGFV--------TFLTNPRRVKEQRPWRKEGVDGLYFDR--DADSYDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVA-LSCLSPALLRRLRSWSLV-CAGSKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDSLNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSM 1077
            D+ + E    +P+F G GFV        T L +P    +  PWR EG + L++DR  +   ++N     VF T   + +D F++ + GG  Y + AT ++  +  S A  R+  +W LV  +  + RW++++G ++E I  L+KGCRAR+   D                                             +E+L+D  Y+I  N RT D  + +L  +    T   +   S + GV   +V+NP +K V  + VR  G+D+ HQD+ N   ++ + LL  L+   G  L+S   K  S+      PL D  +DGGFSAL+G  +W LSS+  L+FRP+  +  SM
Sbjct:  356 DVHTGEDGSALPSFRGVGFVKRLRSGRHTPLPSPDPAVKHLPWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIAD-------------------------------------------KVEEDLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASM 666          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.930e-30
Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  664 RTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
            R  DG+ + L  V +     +  + SR  GVVVP   NPL ++ FDRV G G+D+LHQ +LN  K+++ F+L+AL++ GS +V GR   R ++PPN  P+ D+T+ GG++ALTG Q+W++SSI P L  PIF++
Sbjct:   69 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSH 202          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.100e-24
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 1
Query:  547 HSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
            HS W+N K  N+KT++ C  C V + +L + +Y+I                        D+ + SR  GVVVP   NPL ++ FDRV G G+DILHQ +LN  K+++ F+++AL+  GS +V                  D+T+ GG SALTG Q+W++SSI+P L  PIF++
Sbjct:    2 HSLWANQKHHNAKTERACQACVVPRRDLGNPKYDI-----------------------KDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVP-----------------DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSS 134          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5JE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE27_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.340e-23
Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 1
Query:  391 SKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSL 846
            SK R +++V  + E     E           G S  V VR GL   +LD+P HS  +NTK +N  T + C  C+V +  L + +Y+I  N RT +G+D  + YVK G T  ++  R+++RGVVVP V NPLKKL FDR   +  DILH DSL
Sbjct:  426 SKRRRDQDVESVWEVTNQEENV---------GVSALVLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRRHLGNPRYDIRQNRRTAEGVDADIEYVKQGATKTERVERAKQRGVVVPKVSNPLKKLTFDRQLQVPFDILHADSL 568          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: A0A6H5JXS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.030e-15
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  259 SSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVT 498
            SSD FNY+S  G+ ++V+AT+V L CLSP LLRRLRSW L   G  G  WE ++  LME I+ L+ GC+  +   D  +VT
Sbjct:   60 SSDAFNYFSLSGRKHSVSATFVGLGCLSPTLLRRLRSWYLATLGLPGAAWELDILPLMEIIRWLQNGCKTEISIGDKQTVT 140          
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.970e-13
Identity = 35/80 (43.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query:  826 ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 1065
            +L Q +LN  K+++ F+L+AL++  S +V GR   R ++P N  P+ D+T+ GG++ALTG Q+W++SSI P L  PIF++
Sbjct:    4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSH 83          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1347.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FZI4_ECTSI7.250e-9648.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW9_ECTSI2.540e-5444.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJH2_ECTSI4.410e-4333.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPX4_9PHAE2.630e-3733.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWW6_ECTSI3.110e-3629.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Y8_ECTSI2.930e-3044.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K975_9PHAE1.100e-2436.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE27_9PHAE3.340e-2341.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXS6_9PHAE2.030e-1549.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA9_ECTSI4.970e-1343.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1347contigP-littoralis_Contig1347:23706..25538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1089
Hectar predicted targeting categoryother localisation
Exons3
Cds size1089
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789620.0414605-CDS-P-littoralis_Contig1347:23705..242031680789620.0414605-CDS-P-littoralis_Contig1347:23705..24203Pylaiella littoralis U1_48CDSP-littoralis_Contig1347 23706..24203 +
1680789620.0508754-CDS-P-littoralis_Contig1347:24701..250491680789620.0508754-CDS-P-littoralis_Contig1347:24701..25049Pylaiella littoralis U1_48CDSP-littoralis_Contig1347 24702..25049 +
1680789620.0599155-CDS-P-littoralis_Contig1347:25295..255381680789620.0599155-CDS-P-littoralis_Contig1347:25295..25538Pylaiella littoralis U1_48CDSP-littoralis_Contig1347 25296..25538 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1347.7.1prot_P-littoralis_Contig1347.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1347 23706..25538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1347.7.1

>prot_P-littoralis_Contig1347.7.1 ID=prot_P-littoralis_Contig1347.7.1|Name=mRNA_P-littoralis_Contig1347.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=363bp
VKVQVDALDAPCLVLPAGTDMTSQELNEQVPTFLGEGFVTFLTNPRRVKE
QRPWRKEGVDGLYFDRDADSYDNVDGDPVFSTGIAVSSDGFNYWSFGGKV
YNVNATYVALSCLSPALLRRLRSWSLVCAGSKGRWEEEVGGLMETIQHLE
KGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPC
STCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRER
GVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDG
SALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFR
PIFANHMSMVSK*
back to top

mRNA from alignment at P-littoralis_Contig1347:23706..25538+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1347.7.1 ID=mRNA_P-littoralis_Contig1347.7.1|Name=mRNA_P-littoralis_Contig1347.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1833bp|location=Sequence derived from alignment at P-littoralis_Contig1347:23706..25538+ (Pylaiella littoralis U1_48)
GTCAAGGTGCAAGTGGATGCCCTCGATGCCCCCTGCCTCGTCTTACCGGC GGGTACCGATATGACCTCGCAGGAATTGAACGAGCAGGTGCCTACATTCC TCGGTGAAGGGTTTGTTACTTTTCTCACCAACCCCAGACGGGTGAAGGAA CAACGACCGTGGAGGAAGGAGGGCGTGGATGGCTTGTACTTCGACAGAGA CGCCGATAGCTACGACAACGTTGATGGCGACCCTGTATTTTCGACGGGGA TTGCTGTCTCCAGCGACGGCTTCAACTATTGGTCGTTCGGGGGGAAAGTC TACAACGTCAACGCCACGTACGTGGCTCTGAGCTGTTTGTCACCCGCTCT CCTACGACGCCTACGTTCATGGTCGTTGGTGTGTGCGGGTTCGAAGGGGC GTTGGGAGGAGGAGGTCGGCGGACTAATGGAAACCATTCAGCACCTCGAG AAAGGCTGTCGCGCAAGAATGAAGACTCAAGACGGGCACAGTGTCACTGT GAGTGTCTGTTTGCATTTTCTTTTCTTTACACTTATTTCTACCACAGAGT GATCAGGGAGTCAGGTCTGAATGCCAGCGCTTGCCATTCCGCGCAATGTT TCGGTTTCGTGCAGGCGAGCGCAGTTTTGTGATATTAAGTTATTGCCCCG CGTGCCGCAAACGTAATTTCATTATTTACCTGGTTTTGTTCCCCGGCCTG ATGCCCCATGCCTCTCCACTGTCTGCAACTTTATCTTTTTTGTTGGTGAT GTTTCTTTGTTAAATTTAGTGTTTTCGTCCCTACCATCTATTTCGACAGC GTCTCGTCATATTCAGTGCGATCGGGTGTTTTCCTGGTACGTCACTGCTG TGTTGATAGCCAGTGACCGCTACATACCTCAGAGGTAACGGTGTTGAATA ACCCTAGAGAATATCGACAACCGCTGCGTTATTGCTTTGAGAGTATGCAT GTCATGCGGACTCACTTCTTGTTGTTTTCATTCCCCTCTCATTTAGGTGT TTGTGCGCATGGGCTTATTGACGGCAATGCTCGACACCCCTTATCACAGT GCGTGGTCCAACACGAAGGGCTCAAACTCCAAAACCAAGAAGCCGTGTTC GACGTGCGAGGTCACCCAGGAGGAGCTCTCTGACCACCAGTACAACATCG GCGCCAACCTTCGCACGCAGGATGGCATCGACGACTCTCTGTTGTACGTC AAAGCCGGGGACACAGCCGCGGACCAGGCTCGCCGATCTCGTGAGAGAGG GGTAGTGGTTCCGGACGTGGATAACCCGCTGAAGAAGCTGGTGTTCGACC GAGTTCGGGGCATCGGAGTTGACATACTGCACCAAGACTCCCTTGTGAGT GAAGACGTATTTTAACACTCAATATTGCGGTGACAACTTCAACAGGCGCA TGTTTTTGCTTGGTGGACTTAAAAGTACTTGATTCCGACTCTGATTCGTG GTGGTGATGTGTGATGTGTGATGTTTGTAGTTTTCCTCGTCAGCACGGCT CGGCACCATAAATTTTATGCGACCGGTGACTTCACTGACCATGGTCTCCT TTCCCATTTGTTTTCCCGCCCAACCACCATTGGTTTCAAGAACAAGGCAA AGCGCATGATACGCTTCTTGCTGAATGCACTCAACACCGACGGATCGGCG CTCGTTTCCGGGCGGTTGAAGCTGCGCTCGATAATACCACCAAACGCGGA GCCGCTGGGAGATGTCACAACAGACGGCGGTTTTTCTGCCTTGACTGGAA ACCAGATCTGGGTGTTGAGCAGCATTCTGCCTCTGCTTTTCAGGCCTATT TTCGCCAACCACATGTCCATGGTAAGCAAATAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1347:23706..25538+

>mRNA_P-littoralis_Contig1347.7.1 ID=mRNA_P-littoralis_Contig1347.7.1|Name=mRNA_P-littoralis_Contig1347.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1089bp|location=Sequence derived from alignment at P-littoralis_Contig1347:23706..25538+ (Pylaiella littoralis U1_48)
GTCAAGGTGCAAGTGGATGCCCTCGATGCCCCCTGCCTCGTCTTACCGGC
GGGTACCGATATGACCTCGCAGGAATTGAACGAGCAGGTGCCTACATTCC
TCGGTGAAGGGTTTGTTACTTTTCTCACCAACCCCAGACGGGTGAAGGAA
CAACGACCGTGGAGGAAGGAGGGCGTGGATGGCTTGTACTTCGACAGAGA
CGCCGATAGCTACGACAACGTTGATGGCGACCCTGTATTTTCGACGGGGA
TTGCTGTCTCCAGCGACGGCTTCAACTATTGGTCGTTCGGGGGGAAAGTC
TACAACGTCAACGCCACGTACGTGGCTCTGAGCTGTTTGTCACCCGCTCT
CCTACGACGCCTACGTTCATGGTCGTTGGTGTGTGCGGGTTCGAAGGGGC
GTTGGGAGGAGGAGGTCGGCGGACTAATGGAAACCATTCAGCACCTCGAG
AAAGGCTGTCGCGCAAGAATGAAGACTCAAGACGGGCACAGTGTCACTGT
GTTTGTGCGCATGGGCTTATTGACGGCAATGCTCGACACCCCTTATCACA
GTGCGTGGTCCAACACGAAGGGCTCAAACTCCAAAACCAAGAAGCCGTGT
TCGACGTGCGAGGTCACCCAGGAGGAGCTCTCTGACCACCAGTACAACAT
CGGCGCCAACCTTCGCACGCAGGATGGCATCGACGACTCTCTGTTGTACG
TCAAAGCCGGGGACACAGCCGCGGACCAGGCTCGCCGATCTCGTGAGAGA
GGGGTAGTGGTTCCGGACGTGGATAACCCGCTGAAGAAGCTGGTGTTCGA
CCGAGTTCGGGGCATCGGAGTTGACATACTGCACCAAGACTCCCTTAACA
AGGCAAAGCGCATGATACGCTTCTTGCTGAATGCACTCAACACCGACGGA
TCGGCGCTCGTTTCCGGGCGGTTGAAGCTGCGCTCGATAATACCACCAAA
CGCGGAGCCGCTGGGAGATGTCACAACAGACGGCGGTTTTTCTGCCTTGA
CTGGAAACCAGATCTGGGTGTTGAGCAGCATTCTGCCTCTGCTTTTCAGG
CCTATTTTCGCCAACCACATGTCCATGGTAAGCAAATAA
back to top