prot_P-littoralis_Contig1346.2.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A7S6PUZ9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pedospumella sp. Jangsampo120217C5 TaxID=2782409 RepID=A0A7S6PUZ9_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.030e-35 Identity = 84/141 (59.57%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNL------------------------------ESKEKKEDLDQDKIFFTIYWIIIKYHQRNIRQY---KASLLFEAQQLTQESKKAANF 108
MTEEGTFIINGYERIVISQIIRSPGLYFRKEL+TPRKT+YTATLISDKGLWT ESKEKKED DQDKIF IY ++ Y + Y K LLFEAQQLTQESKK+ F
Sbjct: 141 MTEEGTFIINGYERIVISQIIRSPGLYFRKELVTPRKTVYTATLISDKGLWTKFILDEKINKQTKRFEKDRIYLKLNEFKAHSPESKEKKEDSDQDKIF--IYDLLHYYKISSKEIYDNLKHPLLFEAQQLTQESKKSGEF 279
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A0D3MK66_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ochromonas sp. CCMP1393 TaxID=420556 RepID=A0A0D3MK66_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.060e-23 Identity = 63/135 (46.67%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWT------------------------------NLESKEKKEDLDQDKIFFTIYWIIIKYHQRNIRQYKASLLF----EAQQLTQE 101
MTEEGTFIING ER++ISQIIRSPG+YFRKE T RK IYTAT+IS+KGLWT ++ESKEKKE+ D DK+F + +I+Y N+++ SL + + QQLT+E
Sbjct: 149 MTEEGTFIINGCERVIISQIIRSPGVYFRKEFGTTRKVIYTATVISNKGLWTKFVLDEKTNRETKKVDRDRIYIKLNDFKIKSIESKEKKEESDDDKLFI---YDLIRYFGLNLQEVYDSLKYPLHLDNQQLTRE 280
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A3G2QZU6_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Neotessella volvocina TaxID=2419522 RepID=A0A3G2QZU6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 9.590e-20 Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNLESKEKKEDLDQDKIFFTI 72
MTEEGTF+ING ERIVISQIIRSPG+YFRKE RKT+YTAT+IS+KGLWT + ++D D+IF +
Sbjct: 128 MTEEGTFVINGCERIVISQIIRSPGIYFRKEYGLNRKTLYTATVISNKGLWTKF-ILDSHPEIDMDRIFLKL 198
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A3G2QZV3_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Mallomonas splendens TaxID=52552 RepID=A0A3G2QZV3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.150e-18 Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNLESKEKK 60
MTEEGTF+I+G ERIVISQIIRSPG+YFRKE T RK IYTAT+IS+KGLWT KK
Sbjct: 137 MTEEGTFVISGCERIVISQIIRSPGIYFRKEYGTNRKAIYTATIISNKGLWTKFILDRKK 196
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A3G2QZ39_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Synura uvella TaxID=52557 RepID=A0A3G2QZ39_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.890e-17 Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTI-YTATLISDKGLWTN--LESKEKKED------LDQDKIFFTI 72
MTEEGTF+I+G ERIVISQIIRSPG+YFRKE RKTI Y+AT+IS+KGLWT L+ K++KE +++D+I+ +
Sbjct: 138 MTEEGTFVISGCERIVISQIIRSPGIYFRKEFGQNRKTIIYSATIISNKGLWTRFFLDQKKQKESELKENIINKDRIYMKL 218
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A3G2QYQ1_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A3G2QYQ1_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 8.950e-17 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNLESKEK 59
MTEEGTFII+G ERI+ISQIIRSPG+YFRKE +KT YTAT+IS+KGLWT +K
Sbjct: 149 MTEEGTFIISGCERIIISQIIRSPGIYFRKEFGLSKKTHYTATIISNKGLWTKFILDQK 207
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A3G2QZ03_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Synura sphagnicola TaxID=52556 RepID=A0A3G2QZ03_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.270e-16 Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNL 54
MTEEGTF+I+G ERIVISQIIRSPG+YFRKE RK YTAT+IS+KGLWT +
Sbjct: 138 MTEEGTFVISGCERIVISQIIRSPGIYFRKEFGLTRKINYTATIISNKGLWTKV 191
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A7S6PV59_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Poteriospumella lacustris TaxID=1117027 RepID=A0A7S6PV59_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.780e-14 Identity = 39/84 (46.43%), Postives = 58/84 (69.05%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWT-----NLESKEKKEDLDQDKIFFTIYWIIIKY 79
+TE+G+F +NG ER+V++QI+RSPG+YF+KE ++ +KTIY+AT ISD LWT N S KK++ ++ TI +KY
Sbjct: 168 LTEDGSFFVNGCERVVVNQIVRSPGIYFKKEYLSSQKTIYSATFISDNWLWTKFRLENSSSITKKQNDIENAATNTITKPALKY 251
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A4D6WUJ9_9FLOR (DNA-directed RNA polymerase subunit beta n=1 Tax=Malaconema sp. TaxID=2575621 RepID=A0A4D6WUJ9_9FLOR) HSP 1 Score: 77.0 bits (188), Expect = 4.460e-14 Identity = 44/113 (38.94%), Postives = 70/113 (61.95%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNLESKEKKE---DLDQDK-----IFFTIYWIIIKYHQRNIRQYK----ASLLFEAQQLTQE 101
MT GTFII+G ER++I+QI+RSPG+Y++KEL K+IY+A LIS++G W E K + +D++ IF + ++ +R + +Y ASLL+E ++L +E
Sbjct: 127 MTNRGTFIISGIERVIINQIVRSPGIYYKKELDKNNKSIYSANLISNRGSWLKFEIDSKNQIWVKIDKNYKVNAYIFLRAIGLQVQEIKRKLNKYSFLINASLLYEKKELYKE 239
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Match: A0A1Z1M8S6_9FLOR (DNA-directed RNA polymerase subunit beta n=1 Tax=Caloglossa beccarii TaxID=131038 RepID=A0A1Z1M8S6_9FLOR) HSP 1 Score: 76.3 bits (186), Expect = 8.300e-14 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
Query: 1 MTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNLESKEKKED-LDQDKIFFTIYWIIIKYHQRNIRQYKASL 91
MT GTFII+G ERI+I+QIIRSPG+Y++KEL K IY+A+LIS++G W E K + + DK + +I +K NI++ K+ L
Sbjct: 127 MTNRGTFIISGIERIIINQIIRSPGIYYKKELDKNNKLIYSASLISNRGSWLKFEIDAKNQIWVKIDKNYKINAYIFLKAIGLNIQEIKSKL 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1346.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig1346.2.1 ID=prot_P-littoralis_Contig1346.2.1|Name=mRNA_P-littoralis_Contig1346.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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