mRNA_P-littoralis_Contig1344.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 1089 bits (2817), Expect = 0.000e+0 Identity = 533/798 (66.79%), Postives = 636/798 (79.70%), Query Frame = 1
Query: 1 WAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGKYKGTAALKSWNFESELRGSVSPTEACG 2394
W Y E + AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+ GLQPV+HPD+ L+T A DISA+W+THY+RLA+DVTGNSR D+W W AAPQR H+ LD PI E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP GN +ER R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG RRL PDRWKLAG LPIV YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+ A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++ P+KHR+WTW TGT RWMNRY HRLA D+LP +R+PGGW ++ P LS +T VW REER++ S+TA Y F N L++AR AGHA L EGLA IIRCR+GGFWGAGRLSRR ++HPRY +CPCC EE LAHVLFDC W E R+ LL LIA A+ I+GSA+SG ++KVALLLGGKY+G ALK W ES RG +SP E G
Sbjct: 379 WERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEARNGLLAPLIAAANAIVGSADSGYGKKKVALLLGGKYEGCKALKDWGLESGFRGPISPVEKEG 1176
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 471 bits (1213), Expect = 2.590e-146 Identity = 286/744 (38.44%), Postives = 413/744 (55.51%), Query Frame = 1
Query: 40 LVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASE--FADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2211
+VR +RR+ +A+ A R + FWK++ +A + QPV P +GVL T +I+A W HY L D R+ W P P L ++ PI EL +AL RL +KASG DG+ A+ LKLA +SP K+LL ++N +W + +P++W S VVSI KKGDV M+NYRGIS+M ++K+L+ +++ RL + + + L Q GF EEC Q A + +IA RR+ T+ F+DL+KAYDT+PHE LF+KL+ G+ G+ML F++ LY +S + V+TG+ + S+ ++RG+RQGCP SP+LFNIFINDI DG E LG V G + + RV G LFADD V +A + + L + ++W +++ M G+ KCGVMA+G + L DRW+L G +P+V EY YLG + N L + ++G+++ R V A+ L R IP+ +R +V++ ILP L +G EV+GM +R+Q +N+ R + GVGA A V+ L REL I PI A AAA R RA KA ++ T ++ +V P + R TW +GT RW++R+ A EL NVR P WR L P + S+ + AVW R E S + T W I S+ + N L T A GL +I+ R F A RL+R + R+L CP C E++ H+L +C RW R
Sbjct: 282 MVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASA-----ELAQNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRWEYHR 1018
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 434 bits (1115), Expect = 6.520e-129 Identity = 277/785 (35.29%), Postives = 407/785 (51.85%), Query Frame = 1
Query: 10 YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAG-HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCME--TEEETLAHVLFDCSRWREGRDSLLHGLI 2235
Y T+ A+ VR++ R +W K +Q +R D K W++ S AG+ + QP+KHP + ++T +I+ +W ++ LA D TG+ W + ++ P P L L+ P+ E+ ALL +K KA G DG+ ADFLKL G D G ++ PMA L +L MW + +P W + VV I K +GD +M NYRGISL+ VLK+L II+ RL ++ N H QAGFR +EEC+ L E+ +RR++ + ++L F+DLKKAYDTVPH ALF KL+ GVRG L FI+ LY +S +S R L+RG+RQGCP+SP+LFN+FINDI+D LGV V G + R T + GLLFADDLV ++ ++L Q D +T W + EM G+ KC +M I + LSS D+W L G +P+V EY YLG + + LD++ + ++ + + +++PFL CR IP+ +R V ++ P L+GAE++G+R+ T + A + +AG L REL IPP+ A AAARR RA K S+KTWV+T+ P + R+ TW TG W+ R+ IPD PD+ +P+ ++ + +W R+ S W+ + F A H G +I+ R F A +LS + Y+TLCP C + E++ H+L +C+ W + R L LI
Sbjct: 540 YLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDS----------SPSQAATQICQWIWERDRAKDHSHAWDWFHSCHFEHTSSMLFNLASLHIQWTPGFNAMIQMRTRSFLTARKLSIIGKLPSLYMTLCPFCRNEHAQGESIPHLLVECAAWEKWRRIYLQDLI 1300
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 394 bits (1013), Expect = 3.580e-119 Identity = 250/773 (32.34%), Postives = 396/773 (51.23%), Query Frame = 1
Query: 1 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKV--ALLLGG 2310
W ++EE A++ ++DR++ K L + ++ K W + +A +R +PV D L+ G +I +W++H+E+L+ D G S+ + W K P L D+PIT E+ AL + KA+G DG+P +F K+ D ESP + ++ ++ +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN + + QAGFRK EEC+ Q C EI +RR L+ K T +F+D KKAYD VPHE LFAKL YG G +L F+ +LY N + SVR GD S+TF + GV+QGCP SP LFN++IN+IL+G +G+ GN + V GLLFADD V A + + + + L W + +M I KCG+M + +R K AN+P V Y YLG+ NR LD++ ++ ++ + + + P + +IP+P+RV +++ V++P FG+E+YGM T +Q ++KA R A+ + + E+ I I AA R RA K + +T ++ ++ T FK + TW TGT RW+ R + D L N Q G + + LTT + R + R + S ++ + T + + G + + R G F RL++ + Y C C + E H+L+ CS+W + R+ G D I + +Q ++ +LLGG
Sbjct: 93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKN------DTL--NSTQEGVKK------VEDALTTGKYARSKSKIREKRRKLVFGSSISNWK----ETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKEREECYRGFNNSDDQKIRNLFDKNSQDELLEGVLLGG 828
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 395 bits (1014), Expect = 2.420e-117 Identity = 258/769 (33.55%), Postives = 389/769 (50.59%), Query Frame = 1
Query: 10 YEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
Y E K+ + +L R+DRR + A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W + + D P++ E+ AL +K+ G DG+P++ KL + SP AK LL ++N +W + IP++ S VV IPKKGD+ + NNYRGISL+ T+ KV+ IIS RL + ++N+ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+RG + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+L G + GV + G + E ++GLLFADD V +A + L ++L+ W + EM KCG+M I ST L + + G ++ V EY YLG+VFN K + + + G + +M FL + IP MRVA++R V++P L +G E++GM + +Q + A RLVAGVG S A+ L EL I I + R R K +S KTW++ ++ PFK+R TW +GT RW R++ G + T L + R+ R S+ W + + A G+ + + R+G F A L+ + Y CP C +E +T+ H+L C +W R + + I + + NSG Q ++ LLGG+
Sbjct: 340 YSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLK-----------------GAENKTTAQALRA--------RKIRNDHSKITEWVTRNNLGLTSNWMGLELAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1064
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 392 bits (1007), Expect = 2.120e-116 Identity = 244/705 (34.61%), Postives = 364/705 (51.63%), Query Frame = 1
Query: 211 LMTGAADISASWKTHYERLASDVTGNSRSPDQW----VKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
L+T + + W +H+E LA D TGNSRS +W +TA D P++ E+ AL +K+ G DG+P++ K+ + SP+AK +L ++ +W + IP++ S V+ IPKKGD+ D NNYRGISL+ T+ KVL II+ RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ G + I LY + ++ VR GD S+T GVRQGCP SP+LF+I+IND+LDG + + +P +E + GLLFADD V +A + L ++LT W Q+ EM KCG+M I ST L + + G + V+EY YLG+VFN K + + N + +M FL + +P MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+S L E+ I I A+ R R K ++ KTW+ ++N PFK+R TW +GT RW R++ G T L + R+ R S+ W I + + A G+ + + R+G F A L+ + Y CP C +E ET+ H+L C +W R + + I + + NSG Q ++ LLGG+
Sbjct: 343 LITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTA-----EFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNNTTAQALRA--------RKIRNDHSKITQWVIKNNLGLTSNWMGLELAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQRSNCIGTFIGDNTANLNLQNSGV-QPLLSRLLGGE 1002
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG) HSP 1 Score: 380 bits (977), Expect = 4.020e-115 Identity = 232/704 (32.95%), Postives = 374/704 (53.12%), Query Frame = 1
Query: 244 WKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK--YKGTAALKSWNF 2349
W H+E LA D +GNSR +W + Q + D IT ++ +AL +KA+G+D +P++F KL + + +AK ++ +W +PE + S V+ IPKKGD D NNY+GISLM +++K++ I S RL E +HNL QAGFR +EECV+QA L E +RRK++ T++ F+D KA+D VPH+AL KL + G++ I LY N +I +R G+ SET + GVRQGCP SP+LF++FINDIL+ + + +P E + + GLLFADD V +A + L +++++W ++ EM KCG + IG ST + + + G +P V EY YLG++FN++ + + N + ++ M FL ++IP+ +R ++R V+LP +G E++GM +A +++Q ++ A RLV G G +AA++ + EL I P+ A R RA K +TW++ ++ P K + TW +GT RW+ R+ + P E + R+ T++S+ W + R R I E S +G+ II+ R G + A +L+R ++ YL CP C E + E++ H++F+CS+W R + + + ++ + T Q + LLGG+ YK LK+ ++
Sbjct: 48 WAKHFEELAKDFSGNSRKSTKWESMGVS-QVMYFEECDNTITWKDITKALKSTPNNKAAGKDRIPSEFWKLVEEESFPTTNLAKLFYKLIKNIWDSAYVPEIFNTSIVIPIPKKGDRRDPNNYKGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP------ELEGNIRGLLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITRIR--EELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRFCSENS---PGETLKALTLRT--RKKDSTMISN------WIESNNIGRVRN---IIGLEMLFPEHS-----------KGIMQIIKIRTGTYNFAYKLARSQVIGREYLMKCPFCNEIKPESVEHLIFECSKWTSERREYMGDFLPNKNNLLPGS---TDTQLLGKLLGGELIYKTVDILKNVDY 708
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 398 bits (1023), Expect = 7.180e-115 Identity = 259/769 (33.68%), Postives = 384/769 (49.93%), Query Frame = 1
Query: 10 YEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
Y K+ A R DRR ++ A M T+ P+ W + +G + S + L+TG + S +W H+E LA D TGNSRS ++W + + D +T E+ AL +K+ G DG+P++ KL + SP AK ++N +W+ + IP++ S +V IPKKGD+ D NNYRGISL+ T+ KVL II+ RL++ +H++ QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ G + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+LDG + GV V G + E + GLLFADD V +A + L ++LT W + EM KCG+M I ST L + + G + V EY YLG+VFN K + + N G + +M FL R IP MR+A+VR V++P L +G E++GM +Q + A RLVAGVG S A+ + EL I I + R R K + KTW++ ++N P K+R TW +GT RW R++ S A+ R+ R S+ W + + + A G+ + + R+G + A L+ L+ + T CP C +E +T+ H+L C +W R + + I + + NSG Q ++ LLGG+
Sbjct: 964 YSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFLKGADS-------------------------KTTAQALRARKIRNDHSKITQWVMKNNLGLTSNWMGLELAYPEHARGIRLMAKVRMGAYMTAKSLANSRLILEEFKTKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1688
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 390 bits (1001), Expect = 8.720e-114 Identity = 256/770 (33.25%), Postives = 389/770 (50.52%), Query Frame = 1
Query: 10 YEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
Y + K+ + L R DRR ++ A + + W + +G R G PV + D L+T + W TH+E+LA D TGNSRS D+W T A P D P++ E+ +AL +K+ G DG+P++ KL ++ SP+AK + I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + L ++++ W Q+ EM KCG+M I STR L + + G + V Y YLG+VFN K + + N G + + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I I + R R +K ++KTW++ +++ PFK+R TW +GT RW R++ G + T L + R+ R S+ W I + + A G+ + + R+G F A L+ + Y CP C +E ET+ H+L C +W R + + I + + + N G Q ++ LLGG+
Sbjct: 517 YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNKTTAQALRA--------RKIRNDHSKITEWVIRNNLGLKSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQRSNCIGAFIGDNTSNLNLQNLGV-QPLLSRLLGGE 1240
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG) HSP 1 Score: 382 bits (980), Expect = 6.280e-113 Identity = 243/740 (32.84%), Postives = 385/740 (52.03%), Query Frame = 1
Query: 10 YEETKKTAERLVRQDRRKTWTKALQTASAQMRTD--PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLL 2223
Y +K+ A + R D + K +QTA +M+TD P+ WK+ + KR +T PV + L+T ++ S W +H+E LA D +GNSR+ +WV + + D I ++ +AL +KA G DG+P++ K + S +AK L ++ +W IPE+ S VV IPKKGD+ D NNYRGISL+ T++K++ + +++L+ ++N+ QAGFR +EECV QA L EI +RRK++ T++ F+D KAYD VPH+AL KL G+ G++ I LY + +I VR G S GVRQGCP SP+LF+++IND+ + + + VP G ++ GLLFADD V A + +L +++++W ++ EM KCGVM IG T L + + G +P V Y YLG++FN K + ++ N R ++ M FL + IP+ +R ++R V++P +G E++GM KA T ++Q ++ A RLV G G + A+ L EL + + A R RA K ++KTW+ ++ P K R TW +GT RW R+ A P E + + T + + + W + + R R + F +N ++G+ II+ R G F A +L++ ++ +YL LCP C E++ H++ +CS+W + R L
Sbjct: 235 YISSKERALKSRRADYKNKKLKEVQTA-CKMQTDNSPRQLWKWLKFQS--KRYNTSLTDGPVYDKEK-KLVTDSSLKSEVWASHFEELAKDTSGNSRNHIKWVNMMPN-IKGYYQECDLEIEWEDIKKALNNTPSNKAPGVDGIPSEVWKTVQDEEIPTSNLAKLLYKVVKRIWNMAYIPEKLNTSIVVPIPKKGDLRDPNNYRGISLIPTLVKIVAKVAASKLSFLDLKYNILVKEQAGFRSREECVAQATVLYEIVRRRKIKGLPTWIGFIDFAKAYDRVPHQALLQKLKIQGIGGHLHKVISALYKSPKICVRFGSYLSPVVEYNCGVRQGCPASPILFDLYINDLFENIKGITVPEIGE------KIKGLLFADDAVVFADSPAKLQIAFEKVSQWAKKWEMQVNASKCGVMGIGSQTNML------FTIQGGAVPQVEHYKYLGVMFNDKWNHRSVINNNSENSRRAMNGMYFFLGNKNIPIALRATLIRSVLIPIATYGGELFGMSKARTSKLQTVIDTASRLVIGSGKTIALHR--LREELKLTTVYTKTAVARERAFYKWPTLKTWITDLIEYPMKSRLDTWVSGTRRWTKRFCDHSA---PGETLKYLDRR--------TRANEYSVISNWLKSSGIGRIRNVTG-LELIFPEN-------------SKGIQEIIKIRTGLFRTAMKLAKSKIIDRKYLQLCPFCKNNVPESVEHLILECSKWTQQRQEHL 930 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1344.10.1 >prot_P-littoralis_Contig1344.10.1 ID=prot_P-littoralis_Contig1344.10.1|Name=mRNA_P-littoralis_Contig1344.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=829bp MRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKback to top mRNA from alignment at P-littoralis_Contig1344:27271..30199- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1344.10.1 ID=mRNA_P-littoralis_Contig1344.10.1|Name=mRNA_P-littoralis_Contig1344.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2929bp|location=Sequence derived from alignment at P-littoralis_Contig1344:27271..30199- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1344:27271..30199- >mRNA_P-littoralis_Contig1344.10.1 ID=mRNA_P-littoralis_Contig1344.10.1|Name=mRNA_P-littoralis_Contig1344.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2487bp|location=Sequence derived from alignment at P-littoralis_Contig1344:27271..30199- (Pylaiella littoralis U1_48)back to top |