mRNA_P-littoralis_Contig1344.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1344.10.1
Unique NamemRNA_P-littoralis_Contig1344.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 1089 bits (2817), Expect = 0.000e+0
Identity = 533/798 (66.79%), Postives = 636/798 (79.70%), Query Frame = 1
Query:    1 WAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGKYKGTAALKSWNFESELRGSVSPTEACG 2394
            W  Y E +  AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+  GLQPV+HPD+  L+T A DISA+W+THY+RLA+DVTGNSR  D+W  W AAPQR H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP  GN +ER  R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG   RRL   PDRWKLAG  LPIV  YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+   A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++  P+KHR+WTW TGT RWMNRY HRLA    D+LP  +R+PGGW ++ P  LS  +T  VW REER++ S+TA  Y    F  N L++AR AGHA L EGLA IIRCR+GGFWGAGRLSRR ++HPRY  +CPCC    EE LAHVLFDC  W E R+ LL  LIA A+ I+GSA+SG  ++KVALLLGGKY+G  ALK W  ES  RG +SP E  G
Sbjct:  379 WERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEARNGLLAPLIAAANAIVGSADSGYGKKKVALLLGGKYEGCKALKDWGLESGFRGPISPVEKEG 1176          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 471 bits (1213), Expect = 2.590e-146
Identity = 286/744 (38.44%), Postives = 413/744 (55.51%), Query Frame = 1
Query:   40 LVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASE--FADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2211
            +VR +RR+   +A+  A    R     + FWK++  +A      +    QPV  P +GVL T   +I+A W  HY  L  D      R+      W       P  P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+ G+ML F++ LY +S + V+TG+   + S+   ++RG+RQGCP SP+LFNIFINDI DG E LG  V G     +  +  RV G LFADD V +A + + L  +    ++W +++ M  G+ KCGVMA+G  +    L    DRW+L G  +P+V EY YLG + N  L +  ++G+++    R V A+   L  R IP+ +R +V++  ILP L +G EV+GM      +R+Q  +N+  R + GVGA A  V+   L REL I PI A AAA R RA  KA ++ T ++ +V  P + R  TW +GT RW++R+    A     EL  NVR P  WR L P + S+ +  AVW R E  S + T  W I S+  +  N L    T   A    GL  +I+ R   F  A RL+R   +  R+L  CP C     E++ H+L +C RW   R
Sbjct:  282 MVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASA-----ELAQNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRWEYHR 1018          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 434 bits (1115), Expect = 6.520e-129
Identity = 277/785 (35.29%), Postives = 407/785 (51.85%), Query Frame = 1
Query:   10 YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAG-HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCME--TEEETLAHVLFDCSRWREGRDSLLHGLI 2235
            Y  T+  A+  VR++ R +W K +Q     +R D K  W++                 S  AG+    +       QP+KHP +  ++T   +I+ +W  ++  LA D TG+      W +  ++ P  P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GVRG  L FI+ LY +S +S R             L+RG+RQGCP+SP+LFN+FINDI+D    LGV V G  + R T + GLLFADDLV ++   ++L Q  D +T W  + EM  G+ KC +M I +    LSS   D+W L G  +P+V EY YLG + +  LD++  +  ++    + + +++PFL CR IP+ +R  V   ++ P  L+GAE++G+R+  T  +      A + +AG           L REL IPP+ A AAARR RA  K  S+KTWV+T+   P + R+ TW TG   W+ R+       IPD  PD+          +P+  ++ +   +W R+     S    W+ +  F          A  H     G   +I+ R   F  A +LS    +   Y+TLCP C     + E++ H+L +C+ W + R   L  LI
Sbjct:  540 YLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDS----------SPSQAATQICQWIWERDRAKDHSHAWDWFHSCHFEHTSSMLFNLASLHIQWTPGFNAMIQMRTRSFLTARKLSIIGKLPSLYMTLCPFCRNEHAQGESIPHLLVECAAWEKWRRIYLQDLI 1300          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 394 bits (1013), Expect = 3.580e-119
Identity = 250/773 (32.34%), Postives = 396/773 (51.23%), Query Frame = 1
Query:    1 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKV--ALLLGG 2310
            W ++EE    A++  ++DR++   K L     + ++   K  W +   +A  +R       +PV   D   L+ G  +I  +W++H+E+L+ D  G S+  + W K    P    L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG  G +L F+ +LY N + SVR GD  S+TF  + GV+QGCP SP LFN++IN+IL+G   +G+   GN  +    V GLLFADD V  A + + +    + L  W  + +M   I KCG+M    + +R        K   AN+P V  Y YLG+  NR LD++ ++ ++     + +  + P +   +IP+P+RV +++ V++P   FG+E+YGM    T  +Q  ++KA R      A+     +  + E+ I  I   AA  R RA  K  + +T ++ ++ T FK  + TW TGT RW+ R +        D L  N  Q G  +      +   LTT  + R +   R +       S  ++ +     T  +  +  G   + + R G F    RL++   +   Y   C  C +   E   H+L+ CS+W + R+    G     D  I +     +Q ++   +LLGG
Sbjct:   93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKN------DTL--NSTQEGVKK------VEDALTTGKYARSKSKIREKRRKLVFGSSISNWK----ETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKEREECYRGFNNSDDQKIRNLFDKNSQDELLEGVLLGG 828          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 395 bits (1014), Expect = 2.420e-117
Identity = 258/769 (33.55%), Postives = 389/769 (50.59%), Query Frame = 1
Query:   10 YEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
            Y E K+ + +L R+DRR      +  A    +    +  W +    +G  R     G  P+ +     L+T +   +  W  H+E LA D TGNSRS ++W +   +         D P++  E+  AL     +K+ G DG+P++  KL   +    SP AK LL ++N +W  + IP++   S VV IPKKGD+ + NNYRGISL+ T+ KV+  IIS RL +   ++N+ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+RG +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+L G +  GV + G + E    ++GLLFADD V +A +   L    ++L+ W  + EM     KCG+M I  ST  L      + + G ++  V EY YLG+VFN K +    + +    G +   +M  FL  + IP  MRVA++R V++P L +G E++GM    +  +Q   + A RLVAGVG S A+    L  EL I  I    +  R R   K +S KTW++ ++  PFK+R  TW +GT RW  R++                  G   + T   L +        R+ R   S+   W   +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E +T+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:  340 YSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLK-----------------GAENKTTAQALRA--------RKIRNDHSKITEWVTRNNLGLTSNWMGLELAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1064          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 392 bits (1007), Expect = 2.120e-116
Identity = 244/705 (34.61%), Postives = 364/705 (51.63%), Query Frame = 1
Query:  211 LMTGAADISASWKTHYERLASDVTGNSRSPDQW----VKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
            L+T +   +  W +H+E LA D TGNSRS  +W      +TA          D P++  E+  AL     +K+ G DG+P++  K+   +    SP+AK +L ++  +W  + IP++   S V+ IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR GD  S+T     GVRQGCP SP+LF+I+IND+LDG + + +P     +E    + GLLFADD V +A +   L    ++LT W Q+ EM     KCG+M I  ST  L      + + G  +  V+EY YLG+VFN K +    + N      +   +M  FL  + +P  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+S   L  E+ I  I   A+  R R   K ++ KTW+  ++N PFK+R  TW +GT RW  R++                  G     T   L +        R+ R   S+   W I +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:  343 LITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTA-----EFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNNTTAQALRA--------RKIRNDHSKITQWVIKNNLGLTSNWMGLELAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQRSNCIGTFIGDNTANLNLQNSGV-QPLLSRLLGGE 1002          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG)

HSP 1 Score: 380 bits (977), Expect = 4.020e-115
Identity = 232/704 (32.95%), Postives = 374/704 (53.12%), Query Frame = 1
Query:  244 WKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK--YKGTAALKSWNF 2349
            W  H+E LA D +GNSR   +W     + Q  +    D  IT  ++ +AL     +KA+G+D +P++F KL   +    + +AK    ++  +W    +PE +  S V+ IPKKGD  D NNY+GISLM +++K++  I S RL E   +HNL    QAGFR +EECV+QA  L E  +RRK++   T++ F+D  KA+D VPH+AL  KL    + G++   I  LY N +I +R G+  SET   + GVRQGCP SP+LF++FINDIL+  + + +P      E +  + GLLFADD V +A +   L    +++++W ++ EM     KCG + IG ST  +      + + G  +P V EY YLG++FN++ +    + N      + ++ M  FL  ++IP+ +R  ++R V+LP   +G E++GM +A  +++Q  ++ A RLV G G +AA++ +    EL I P+    A  R RA  K    +TW++ ++  P K +  TW +GT RW+ R+    +   P E    +      R+   T++S+      W     + R R     I  E      S           +G+  II+ R G +  A +L+R  ++   YL  CP C E + E++ H++F+CS+W   R   +   +   + ++  +   T  Q +  LLGG+  YK    LK+ ++
Sbjct:   48 WAKHFEELAKDFSGNSRKSTKWESMGVS-QVMYFEECDNTITWKDITKALKSTPNNKAAGKDRIPSEFWKLVEEESFPTTNLAKLFYKLIKNIWDSAYVPEIFNTSIVIPIPKKGDRRDPNNYKGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP------ELEGNIRGLLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITRIR--EELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRFCSENS---PGETLKALTLRT--RKKDSTMISN------WIESNNIGRVRN---IIGLEMLFPEHS-----------KGIMQIIKIRTGTYNFAYKLARSQVIGREYLMKCPFCNEIKPESVEHLIFECSKWTSERREYMGDFLPNKNNLLPGS---TDTQLLGKLLGGELIYKTVDILKNVDY 708          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 398 bits (1023), Expect = 7.180e-115
Identity = 259/769 (33.68%), Postives = 384/769 (49.93%), Query Frame = 1
Query:   10 YEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
            Y   K+ A    R DRR      ++ A   M T+ P+  W +    +G   +   S +          L+TG  + S +W  H+E LA D TGNSRS ++W       +  +    D  +T  E+  AL     +K+ G DG+P++  KL   +    SP AK    ++N +W+ + IP++   S +V IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL++   +H++    QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+ G +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+LDG +  GV V G + E    + GLLFADD V +A +   L    ++LT W  + EM     KCG+M I  ST  L      + + G  +  V EY YLG+VFN K +    + N    G +   +M  FL  R IP  MR+A+VR V++P L +G E++GM       +Q   + A RLVAGVG S A+  +    EL I  I    +  R R   K +  KTW++ ++N P K+R  TW +GT RW  R++    S                              A+  R+ R   S+   W + +              +   A G+  + + R+G +  A  L+   L+   + T CP C  +E +T+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:  964 YSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFLKGADS-------------------------KTTAQALRARKIRNDHSKITQWVMKNNLGLTSNWMGLELAYPEHARGIRLMAKVRMGAYMTAKSLANSRLILEEFKTKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1688          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 390 bits (1001), Expect = 8.720e-114
Identity = 256/770 (33.25%), Postives = 389/770 (50.52%), Query Frame = 1
Query:   10 YEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 2313
            Y + K+ +  L R DRR      ++ A    +    +  W +    +G  R     G  PV + D   L+T     +  W TH+E+LA D TGNSRS D+W    T A   P     D P++  E+ +AL     +K+ G DG+P++  KL   ++   SP+AK +  I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+   +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A +   L    ++++ W Q+ EM     KCG+M I  STR L      + + G  +  V  Y YLG+VFN K +    + N    G + + +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  I    +  R R  +K  ++KTW++ +++ PFK+R  TW +GT RW  R++                  G   + T   L +        R+ R   S+   W I +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R + +   I +  + +   N G  Q  ++ LLGG+
Sbjct:  517 YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNKTTAQALRA--------RKIRNDHSKITEWVIRNNLGLKSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQRSNCIGAFIGDNTSNLNLQNLGV-QPLLSRLLGGE 1240          
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG)

HSP 1 Score: 382 bits (980), Expect = 6.280e-113
Identity = 243/740 (32.84%), Postives = 385/740 (52.03%), Query Frame = 1
Query:   10 YEETKKTAERLVRQDRRKTWTKALQTASAQMRTD--PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLL 2223
            Y  +K+ A +  R D +    K +QTA  +M+TD  P+  WK+    +  KR +T     PV   +   L+T ++  S  W +H+E LA D +GNSR+  +WV       + +    D  I   ++ +AL     +KA G DG+P++  K    +    S +AK L  ++  +W    IPE+   S VV IPKKGD+ D NNYRGISL+ T++K++  + +++L+    ++N+    QAGFR +EECV QA  L EI +RRK++   T++ F+D  KAYD VPH+AL  KL   G+ G++   I  LY + +I VR G   S       GVRQGCP SP+LF+++IND+ +  + + VP  G       ++ GLLFADD V  A +  +L    +++++W ++ EM     KCGVM IG  T  L      + + G  +P V  Y YLG++FN K +   ++ N      R ++ M  FL  + IP+ +R  ++R V++P   +G E++GM KA T ++Q  ++ A RLV G G + A+    L  EL +  +    A  R RA  K  ++KTW+  ++  P K R  TW +GT RW  R+    A   P E    + +         T  + +   + W +   + R R     +   F +N             ++G+  II+ R G F  A +L++  ++  +YL LCP C     E++ H++ +CS+W + R   L
Sbjct:  235 YISSKERALKSRRADYKNKKLKEVQTA-CKMQTDNSPRQLWKWLKFQS--KRYNTSLTDGPVYDKEK-KLVTDSSLKSEVWASHFEELAKDTSGNSRNHIKWVNMMPN-IKGYYQECDLEIEWEDIKKALNNTPSNKAPGVDGIPSEVWKTVQDEEIPTSNLAKLLYKVVKRIWNMAYIPEKLNTSIVVPIPKKGDLRDPNNYRGISLIPTLVKIVAKVAASKLSFLDLKYNILVKEQAGFRSREECVAQATVLYEIVRRRKIKGLPTWIGFIDFAKAYDRVPHQALLQKLKIQGIGGHLHKVISALYKSPKICVRFGSYLSPVVEYNCGVRQGCPASPILFDLYINDLFENIKGITVPEIGE------KIKGLLFADDAVVFADSPAKLQIAFEKVSQWAKKWEMQVNASKCGVMGIGSQTNML------FTIQGGAVPQVEHYKYLGVMFNDKWNHRSVINNNSENSRRAMNGMYFFLGNKNIPIALRATLIRSVLIPIATYGGELFGMSKARTSKLQTVIDTASRLVIGSGKTIALHR--LREELKLTTVYTKTAVARERAFYKWPTLKTWITDLIEYPMKSRLDTWVSGTRRWTKRFCDHSA---PGETLKYLDRR--------TRANEYSVISNWLKSSGIGRIRNVTG-LELIFPEN-------------SKGIQEIIKIRTGLFRTAMKLAKSKIIDRKYLQLCPFCKNNVPESVEHLILECSKWTQQRQEHL 930          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1344.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE0.000e+066.79Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO2.590e-14638.44Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A3M2C3P5_9GAMM6.520e-12935.29Reverse transcriptase domain-containing protein n=... [more]
L7JX89_TRAHO3.580e-11932.34RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1YAQ4_9FUNG2.420e-11733.55RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1Y7R2_9FUNG2.120e-11634.61Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1X253_9FUNG4.020e-11532.95RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YP44_9FUNG7.180e-11533.68LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A1R1X7T5_9FUNG8.720e-11433.25RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R0GP03_9FUNG6.280e-11332.84RNA-directed DNA polymerase from mobile element jo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1344contigP-littoralis_Contig1344:27271..30199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog45157.CMT010CT
PFAMsDUF4283,Exo_endo_phos_2,RVT_1
Model size2929
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.51e-80
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size2487
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789619.2185175-UTR-P-littoralis_Contig1344:27270..276131680789619.2185175-UTR-P-littoralis_Contig1344:27270..27613Pylaiella littoralis U1_48UTRP-littoralis_Contig1344 27271..27613 -
1680789619.24299-UTR-P-littoralis_Contig1344:30100..301991680789619.24299-UTR-P-littoralis_Contig1344:30100..30199Pylaiella littoralis U1_48UTRP-littoralis_Contig1344 30101..30199 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789619.2332737-CDS-P-littoralis_Contig1344:27613..301001680789619.2332737-CDS-P-littoralis_Contig1344:27613..30100Pylaiella littoralis U1_48CDSP-littoralis_Contig1344 27614..30100 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1344.10.1prot_P-littoralis_Contig1344.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1344 27614..30100 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1344.10.1

>prot_P-littoralis_Contig1344.10.1 ID=prot_P-littoralis_Contig1344.10.1|Name=mRNA_P-littoralis_Contig1344.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=829bp
MRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWK
THYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLR
LKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEE
WQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHN
LFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTV
PHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVR
QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVA
IASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRW
KLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRC
RQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAG
VGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTP
FKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILS
SHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAY
IIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRW
REGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGKYKGTAALKSWNF
ESELRGSVSPTEACGIPNPEDDKDEPSTEPLRSPRVLELGCLRVASFLVW
VMGMRLPIIRALGNPQGQPSSADQSANA*
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mRNA from alignment at P-littoralis_Contig1344:27271..30199-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1344.10.1 ID=mRNA_P-littoralis_Contig1344.10.1|Name=mRNA_P-littoralis_Contig1344.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2929bp|location=Sequence derived from alignment at P-littoralis_Contig1344:27271..30199- (Pylaiella littoralis U1_48)
TGGGCAGCATACGAGGAGACTAAGAAGACCGCCGAACGACTGGTTCGACA GGACCGCCGCAAAACATGGACGAAAGCGCTCCAAACAGCGAGCGCGCAGA TGCGTACTGATCCGAAAGCGTTCTGGAAATTCTCCTCGGATGTCGCTGGG TGGAAACGCAAGGATACAGGCAGCGGACTCCAACCGGTGAAACACCCGGA TACAGGTGTGCTGATGACCGGCGCTGCCGACATTAGCGCGTCCTGGAAAA CCCACTACGAGCGACTTGCTTCCGACGTTACAGGGAATAGCAGGTCCCCC GACCAATGGGTGAAATGGACCGCCGCGCCTCAGCGCCCCCACCTAGCATC GTTGGATGAACCAATAACGATGCCCGAATTGAATGAAGCCCTCCTCCGAC TTAAGAGACACAAGGCTTCCGGCCGGGACGGATTACCAGCAGATTTTCTG AAACTCGCGGCAGGTGACGTGGGAACCGAGTCACCCATGGCCAAGGCCCT CCTAGGGATACTCAACCTAATGTGGAAATACCAGATTATCCCCGAGGAGT GGCAGGACTCCACGGTGGTCTCGATCCCCAAGAAAGGAGATGTCGCCGAC ATGAACAACTACCGAGGGATCTCGCTCATGAGCACCGTCCTTAAGGTACT TGTGATGATTATCAGCACGCGCCTCAACGAGACCTTTGAAGAACACAACC TGTTCTCGCACGCACAAGCAGGATTTAGGAAGAAAGAGGAATGTGTGACC CAGGCCGCATGCCTCCTCGAGATCGCGCAACGACGCAAGCTCCAACGCAA GGCGACATTTCTCATGTTCGTCGATCTCAAGAAGGCCTACGACACGGTGC CGCACGAAGCGTTATTCGCCAAACTCGATTTTTACGGTGTGCGCGGGAAC ATGTTGGGTTTTATCCGCAAGCTGTATGCGAACAGCCGTATCTCTGTCCG GACCGGAGACCTTTTCTCGGAGACTTTTGGCCTGAAACGCGGGGTGAGAC AAGGGTGCCCCCTATCACCGGTCCTGTTCAATATATTCATTAATGATATC CTGGACGGAACCGAGACACTTGGAGTACCGGTATCGGGAAACAATGTAGA ACGCAAAACTCGTGTCTCCGGACTTTTGTTCGCCGATGACCTTGTTGCTA TCGCCTCAACCCGGAACCGACTAGCTCAACTCGGGGATCGGCTGACCAAA TGGTTGCAGGAGAACGAGATGTCAGCCGGGATTCACAAATGCGGGGTCAT GGCCATTGGCGTGAGCACGCGGCGACTCTCCTCGACGCCGGATAGATGGA AGCTTGCGGGCGCGAACCTGCCCATTGTCCGTGAATATACGTACCTGGGC CTCGTTTTCAACCGCAAGTTAGATGTGGAGGTTATGATGGGGAACAAACT GGCGGCGGGGGCCCGCATGGTATCGGCAATGGCGCCGTTTCTCCGCTGCC GACAGATCCCCGTGCCGATGAGAGTCGCCGTCGTGCGCGGAGTGATTTTG CCCAGGCTCCTATTTGGTGCGGAGGTGTATGGCATGCGCAAAGCGATCAC CCATAGGATGCAACTGCAGATGAATAAGGCATTTAGATTGGTGGCTGGAG TTGGTGCCTCGGCTGCCGTATCCAATGTCGCCCTGTGGCGGGAGCTGGAC ATCCCCCCGATTTGCGCTAGCGCCGCAGCACGTCGTGCGCGAGCGCTCCA AAAAGCTAGTTCGATGAAAACTTGGGTTGCCACGATGGTCAATACACCGT TCAAGCACCGCCGCTGGACTTGGTGCACGGGAACCCACCGTTGGATGAAC CGGTACATTCACCGTCTTGCTAGCTGGATTCCGGACGAATTGCCTGACAA CGTCAGACAACCGGGGGGATGGCGGGAATTAACCCCAACGATTTTAAGCT CCCACCTCACCACGGCGGTATGGCGACGCGAAGAGAGGCTGTCCCGTTCA AGGACGGCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGTC CTCGGCGCGGACGGCGGGACACGCTGCGCTTGCTGAAGGCCTCGCATACA TTATTCGATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCCGG CGGGATTTGGTTCATCCCCGATACTTAACATTGTGCCCGTGCTGCATGGA GACGGAAGAAGAGACACTTGCGCACGTACTATTCGATTGCTCCCGGTGGC GGGAGGGTCGGGATAGCCTACTACACGGGCTTATTGCGGAAGCCGACACG ATCATCGGCTCCGCTAACTCAGGAACTGCTCAGCAAAAGGTTGCCCTGCT TCTCGGAGGGAAGTATAAAGGGACCGCAGCGTTGAAGTCTTGGAATTTCG AATCAGAATTACGGGGGTCGGTCTCGCCTACGGAGGCATGCGGCATACCT AACCCGGAAGACGATAAGGACGAACCCTCGACGGAACCGTTGCGCTCACC CAGGGTTTTGGAACTTGGTTGCCTCCGGGTGGCATCTTTCCTTGTATGGG TGATGGGTATGCGGCTGCCCATCATCCGGGCTTTGGGGAATCCCCAAGGC CAGCCTTCCTCCGCGGATCAAAGCGCTAACGCGTAGGGTAGCTCGAGTGG ACTACGTCGTTGGGCGTCTCCACGTACTGAGCATGACTGGGATGTCCGGA AGGGTTCGTTAGGCGGTGAGGGGTTCTCCCAAGTCCGTCACTACCGGTTG ACAATCGTGCAGGTCGACTGGTGTCTAGCCCAAGGACCTGTAAGGGACGC CCCGCAATGGGCGGCTGGTCTCGCAAGAGATAACGAACTTAGATGTCCTT CTAGGGAGTCAATAGGTGTGAGAACATCGCCGGCTTACCTGGAGCACCGC AAAGTGCGGGTAAAGATTGCCCCCCGATACTTCCCAGGGTATCGAATGGT TCAAAATTGGACCCCGCGTTGGAATGAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1344:27271..30199-

>mRNA_P-littoralis_Contig1344.10.1 ID=mRNA_P-littoralis_Contig1344.10.1|Name=mRNA_P-littoralis_Contig1344.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2487bp|location=Sequence derived from alignment at P-littoralis_Contig1344:27271..30199- (Pylaiella littoralis U1_48)
ATGCGTACTGATCCGAAAGCGTTCTGGAAATTCTCCTCGGATGTCGCTGG
GTGGAAACGCAAGGATACAGGCAGCGGACTCCAACCGGTGAAACACCCGG
ATACAGGTGTGCTGATGACCGGCGCTGCCGACATTAGCGCGTCCTGGAAA
ACCCACTACGAGCGACTTGCTTCCGACGTTACAGGGAATAGCAGGTCCCC
CGACCAATGGGTGAAATGGACCGCCGCGCCTCAGCGCCCCCACCTAGCAT
CGTTGGATGAACCAATAACGATGCCCGAATTGAATGAAGCCCTCCTCCGA
CTTAAGAGACACAAGGCTTCCGGCCGGGACGGATTACCAGCAGATTTTCT
GAAACTCGCGGCAGGTGACGTGGGAACCGAGTCACCCATGGCCAAGGCCC
TCCTAGGGATACTCAACCTAATGTGGAAATACCAGATTATCCCCGAGGAG
TGGCAGGACTCCACGGTGGTCTCGATCCCCAAGAAAGGAGATGTCGCCGA
CATGAACAACTACCGAGGGATCTCGCTCATGAGCACCGTCCTTAAGGTAC
TTGTGATGATTATCAGCACGCGCCTCAACGAGACCTTTGAAGAACACAAC
CTGTTCTCGCACGCACAAGCAGGATTTAGGAAGAAAGAGGAATGTGTGAC
CCAGGCCGCATGCCTCCTCGAGATCGCGCAACGACGCAAGCTCCAACGCA
AGGCGACATTTCTCATGTTCGTCGATCTCAAGAAGGCCTACGACACGGTG
CCGCACGAAGCGTTATTCGCCAAACTCGATTTTTACGGTGTGCGCGGGAA
CATGTTGGGTTTTATCCGCAAGCTGTATGCGAACAGCCGTATCTCTGTCC
GGACCGGAGACCTTTTCTCGGAGACTTTTGGCCTGAAACGCGGGGTGAGA
CAAGGGTGCCCCCTATCACCGGTCCTGTTCAATATATTCATTAATGATAT
CCTGGACGGAACCGAGACACTTGGAGTACCGGTATCGGGAAACAATGTAG
AACGCAAAACTCGTGTCTCCGGACTTTTGTTCGCCGATGACCTTGTTGCT
ATCGCCTCAACCCGGAACCGACTAGCTCAACTCGGGGATCGGCTGACCAA
ATGGTTGCAGGAGAACGAGATGTCAGCCGGGATTCACAAATGCGGGGTCA
TGGCCATTGGCGTGAGCACGCGGCGACTCTCCTCGACGCCGGATAGATGG
AAGCTTGCGGGCGCGAACCTGCCCATTGTCCGTGAATATACGTACCTGGG
CCTCGTTTTCAACCGCAAGTTAGATGTGGAGGTTATGATGGGGAACAAAC
TGGCGGCGGGGGCCCGCATGGTATCGGCAATGGCGCCGTTTCTCCGCTGC
CGACAGATCCCCGTGCCGATGAGAGTCGCCGTCGTGCGCGGAGTGATTTT
GCCCAGGCTCCTATTTGGTGCGGAGGTGTATGGCATGCGCAAAGCGATCA
CCCATAGGATGCAACTGCAGATGAATAAGGCATTTAGATTGGTGGCTGGA
GTTGGTGCCTCGGCTGCCGTATCCAATGTCGCCCTGTGGCGGGAGCTGGA
CATCCCCCCGATTTGCGCTAGCGCCGCAGCACGTCGTGCGCGAGCGCTCC
AAAAAGCTAGTTCGATGAAAACTTGGGTTGCCACGATGGTCAATACACCG
TTCAAGCACCGCCGCTGGACTTGGTGCACGGGAACCCACCGTTGGATGAA
CCGGTACATTCACCGTCTTGCTAGCTGGATTCCGGACGAATTGCCTGACA
ACGTCAGACAACCGGGGGGATGGCGGGAATTAACCCCAACGATTTTAAGC
TCCCACCTCACCACGGCGGTATGGCGACGCGAAGAGAGGCTGTCCCGTTC
AAGGACGGCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGT
CCTCGGCGCGGACGGCGGGACACGCTGCGCTTGCTGAAGGCCTCGCATAC
ATTATTCGATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCCG
GCGGGATTTGGTTCATCCCCGATACTTAACATTGTGCCCGTGCTGCATGG
AGACGGAAGAAGAGACACTTGCGCACGTACTATTCGATTGCTCCCGGTGG
CGGGAGGGTCGGGATAGCCTACTACACGGGCTTATTGCGGAAGCCGACAC
GATCATCGGCTCCGCTAACTCAGGAACTGCTCAGCAAAAGGTTGCCCTGC
TTCTCGGAGGGAAGTATAAAGGGACCGCAGCGTTGAAGTCTTGGAATTTC
GAATCAGAATTACGGGGGTCGGTCTCGCCTACGGAGGCATGCGGCATACC
TAACCCGGAAGACGATAAGGACGAACCCTCGACGGAACCGTTGCGCTCAC
CCAGGGTTTTGGAACTTGGTTGCCTCCGGGTGGCATCTTTCCTTGTATGG
GTGATGGGTATGCGGCTGCCCATCATCCGGGCTTTGGGGAATCCCCAAGG
CCAGCCTTCCTCCGCGGATCAAAGCGCTAACGCGTAG
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