prot_P-littoralis_Contig1342.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1342.1.1
Unique Nameprot_P-littoralis_Contig1342.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length653
Homology
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 796 bits (2057), Expect = 2.780e-275
Identity = 407/687 (59.24%), Postives = 502/687 (73.07%), Query Frame = 0
Query:    4 GKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHV---TREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            GK PLRT+R+Q+R LR ++P DSI+LMGDFNR+R  V++W       I+V EL  KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T       D +GV +   T + G+  RI    +PMPG++WY++ G RG+ NHQ+++H+ YW PL DL+EEG  +L   D  A+ DAAA+RMV+ + QVA+    TK    +R PALK  IARAIDDRG++YR A++ R +      AW  Y E +  AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+  GLQPV+HPD+  L+T A DISA+W+THY+RLA+DVTGNSR  D+W  W AAPQR H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGV                                    QGCPLSPVLFNIFINDILDG E+LGVP  GN +ER  R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG   RRL
Sbjct:  126 GKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADAST------GDSVGVPINARTIQRGE--RINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRL 804          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 295 bits (754), Expect = 1.240e-82
Identity = 240/755 (31.79%), Postives = 344/755 (45.56%), Query Frame = 0
Query:    1 GRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVS----MMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQR-----NHQRMVHSTYWTPLLDLLEEGE-GDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV---------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSS 653
            G+   E L  + SQL+ L  QFP   +V++GD+N    E+ + L R   P+    +    A   T     +  IDH V     M  H   H  R RV R  D+SDH+PL+             A  P         +  +G    IE          W R G +R  R     + Q +VH  +W PL  L+++ E  DLD        D AA R+V T  +VA+   +  L++   +P    S   A    G+    + +TR   A + A +                   Y  T+  A+  VR++ R +W K +Q     +R D K  W++                 S  AG+    +       QP+KHP +  ++T   +I+ +W  ++  LA D TG+      W +  ++ P  P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GV                                       QGCP+SP+LFN+FINDI+D    LGV V G  + R T + GLLFADDLV ++   ++L Q  D +T W  + EM  G+ KC +M I +    LSS
Sbjct:  272 GKRRTEVLHLLLSQLKALLRQFPSTPLVVLGDWNMREQELAKLLARWHLPLARASVCGNPATTHTPRLRPRSAIDHAVYRTDIMRTH---HQLRCRVDRSWDLSDHWPLLVRCLYHNLHQQEHAPSP---SXXXXXSYSKGTCSDIEQG--------WVRVGRMRPLRLLSEDSKQELVHHNFWNPLRALMDQEEDSDLD-------VDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSS 1001          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 273 bits (699), Expect = 2.890e-76
Identity = 222/698 (31.81%), Postives = 320/698 (45.85%), Query Frame = 0
Query:    6 EPLRT-IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV---------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIG 645
            EP R  +R +L +LRE+FP+D+IV+ GD+N    ++D  LRR         +  +DA     GT   GS R IDH V+        L  P  +      D SDH+P+              A  P   G             R+   ++P P             R+           P  D   EG    +     A AD     +  TA +V     V++ R     P L+ SI  AI  R   +    ++ RG    ++ A   Y   +   + +VR +RR+   +A+  A    R     + FWK++  +A      +    QPV  P +GVL T   +I+A W  HY  L  D      R+      W       P  P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+                                       QGCP SP+LFNIFINDI DG E LG  V G     +  +  RV G LFADD V +A + + L  +    ++W +++ M  G+ KCGVMA+G
Sbjct:   23 EPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVF-------------ASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSIDADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALG 700          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 249 bits (637), Expect = 4.410e-67
Identity = 205/678 (30.24%), Postives = 310/678 (45.72%), Query Frame = 0
Query:   15 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            LR++R++  +  I+L+GDFN+        L R    ++   +R      G+R +G+   R IDH ++    P +     +VI+ VD+SDH P+V+ +                                +E   +P P     RK  +   +       S     +LD LE    DL E   + +  AA                ++ ++E K+  K  L      AI  R K+++      G   N + +   Y   K+ A    R DRR      ++ A   M T+ P+  W +    +G   +   S +          L+TG  + S +W  H+E LA D TGNSRS ++W       +  +    D  +T  E+  AL     +K+ G DG+P++  KL   +    SP AK    ++N +W+ + IP++   S +V IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL++   +H++    QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+                                    QGCP SP+LF+IFIND+LDG +  GV V G + E    + GLLFADD V +A +   L    ++LT W  + EM     KCG+M I  ST  L
Sbjct:  771 LRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWD-------------------------------MEALKIPAP----QRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAA--------------DELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML 1377          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 244 bits (623), Expect = 1.160e-66
Identity = 144/426 (33.80%), Postives = 219/426 (51.41%), Query Frame = 0
Query:  262 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRR 650
            W ++EE    A++  ++DR++   K L     + ++   K  W +   +A  +R       +PV   D   L+ G  +I  +W++H+E+L+ D  G S+  + W K    P    L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG                                     QGCP SP LFN++IN+IL+G   +G+   GN  +    V GLLFADD V  A + + +    + L  W  + +M   I KCG+M    + +R
Sbjct:   93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQR 507          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 248 bits (632), Expect = 1.420e-66
Identity = 202/681 (29.66%), Postives = 315/681 (46.26%), Query Frame = 0
Query:   15 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPI--RIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            LR+LR +  +D I+L GDFN+        L R    ++   +       G+R +G+   R IDH+    ++ +P       +V++ VD+SDH P+++ +  +  D+ T     V   I V   +E G+        AAL  P                                   E ++++L          +R+    ++ A+     K+ +      L     +A + R K ++R     GD    T     Y + K+ +  L R DRR      ++ A    +    +  W +    +G  R     G  PV + D   L+T     +  W TH+E+LA D TGNSRS D+W    T A   P     D P++  E+ +AL     +K+ G DG+P++  KL   ++   SP+AK +  I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+                                    QGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A +   L    ++++ W Q+ EM     KCG+M I  STR L
Sbjct:  324 LRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPT-----VPRKINVESIKELGESFVSNNRFAALTEP-----------------------------------EFNIEDL---------TSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML 929          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG)

HSP 1 Score: 234 bits (598), Expect = 9.340e-64
Identity = 191/674 (28.34%), Postives = 303/674 (44.96%), Query Frame = 0
Query:   18 LREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            LR +  +D I+L GDFN+        L R    ++  M    K + +     G  R IDH+    ++ +P       +V++ VD+SDH P+++ +  +  D+ T         I V + +E G+                               V    +  L +L    E ++++L          + + +  ++ A+     K+ +      L     + I+ R K ++R     GD          Y + K+ +  L R DRR      ++ A    +    +  W +    +G  R     G  P+ + D   L+T     +  W TH+E LA D TGNSRS D+W      P        D P++  E+ +AL     +K+ G DG+P++  KL   +    SP AK    I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+                                    QGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A + + L    ++++ W Q+ EM     KCG+M I   T  L
Sbjct:    1 LRTKRRKDKIILAGDFNKNTDSTVALLNRIGVGLRRAMVTNSKGSRMNGATMG--RMIDHISFSGLINNPN----YAKVLKSVDLSDHLPVMAEWNIEALDSPT-----APRKINVELIKEIGE-----------------------------SFVSKNRFAALAEL----ESNIEDL---------TSSLNNGIWESAEELNAIKIEKISISTVLSKETIKVINKRRKAFKR---LIGDPKT----LIEYRDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRELWSWLKRFSGRFRSSLIDG--PIYNNDN-KLITDTNAKAEVWATHFEELAKDSTGNSRSADKWENIGTIPAV--FPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGIMGINSCTGML 603          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG)

HSP 1 Score: 238 bits (607), Expect = 1.480e-63
Identity = 193/677 (28.51%), Postives = 303/677 (44.76%), Query Frame = 0
Query:   15 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            LR+LR +  +  IVLMGDFN+        L R    ++  ++       G+R +G   T+  M+  +A+    L  P   +V++ VD+SDH P++S +  +      P                   P RI+ A +   G               +  + +  ++ L D          + + + + D+  T + +TA ++       K    + +  L       I  R KM+++  K    +         Y + K+ A +L R+DRR      ++ A    +    +  W +    +G  R     G  P+   +   L+T +   +  W  H+E LA D TGNSRS ++W               D P++  E+  AL      K+ G DG+P++  K    ++   SP AK L  ++  +W  + IPE+   S VV IPKKGD+ + NNYRGISL+ T+ KV+  II  RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+                                    QGCP SP+LF+I+IND+LDG + + +P     +       GLLFADD V +A +   L    ++LT W  + EM     KCGVM I  ST  L
Sbjct:  125 LRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVP-------------------PKRIDTAKMKEIG---------------ESFISNNRFSVLAD---------QDSNTENLVDSVTTSIWETAEELD----ALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML 731          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 236 bits (601), Expect = 7.860e-63
Identity = 192/680 (28.24%), Postives = 311/680 (45.74%), Query Frame = 0
Query:   11 IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            + + LR+LR +  +  I+L+GDFN+        L R    ++  +    K + +     G  R IDH+  +  A+  ++ +   V++ VD+SDH P+++ +                                IE   +P+P     R    + ++   R +    +  L  L         E + + + ++  T + +TA ++       K  +   +  L       I  R K++++  K         +    Y E K+ + +L R+DRR      +  A    +    +  W +    +G  R     G  P+ +     L+T +   +  W  H+E LA D TGNSRS ++W +   +         D P++  E+  AL     +K+ G DG+P++  KL   +    SP AK LL ++N +W  + IP++   S VV IPKKGD+ + NNYRGISL+ T+ KV+  IIS RL +   ++N+ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+                                    QGCP SP+LF+IFIND+L G +  GV + G + E    ++GLLFADD V +A +   L    ++L+ W  + EM     KCG+M I  ST  L
Sbjct:  143 LTNYLRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWN-------------------------------IESLKIPLPPK---RIDTEKMKKQGTRFISDNRFAVLASL---------EPNTENLVNSVTTSIWETAEELD----ALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML 753          
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1XKG1_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKG1_9FUNG)

HSP 1 Score: 233 bits (593), Expect = 2.070e-61
Identity = 143/414 (34.54%), Postives = 217/414 (52.42%), Query Frame = 0
Query:  277 RQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQR--PHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 651
            R+D +K   + ++ A    +  +P+  W++    A  KR +  S   P+      ++  G  +    W  H+E LA DV+GNS+  D   KW    QR   +    D+ IT  ++  A+     +KA G DG+P++  KL   +   ES ++K L+ +L  MW    IPE +  S +V IPKKGD  D NNYRGISL+ T++K+L  I++ +LNE   ++NL    QAGFR +EECV+QA  L E+ +RRK++   T++ F+D  KAYD VPHEAL +KL    +                                    QGCP SP+LF++FINDIL+  + + +P          ++ GLLFADD V  A + + L    +R+++W ++ EM     KCGV+ IG ST+ +
Sbjct:  795 REDYKKKSNREIKKACKLYLENNPRFLWRWLKYQA--KRFNASSIDGPIFDRHRNIVTDGL-EKEKVWADHFEELAKDVSGNSKCAD---KWGEIEQRHNEYYEECDKNITWDDIRRAIKVTPNNKAPGIDGIPSELWKLVQEEKNPESYLSKLLVELLLKMWNSAHIPEIFNTSIIVPIPKKGDPRDTNNYRGISLIPTLVKILAKIVAQKLNELDFKYNLLVKEQAGFRSREECVSQATVLYEVVRRRKIKGIPTWIGFIDFAKAYDRVPHEALLSKLKSQKIGGQLHRVISALYKSPRICVRVGNSISRKFEYSRGVRQGCPASPMLFDLFINDILENIKGINIPTINK------KIKGLLFADDAVVFADSPSELQIAFERVSEWAEKWEMQVNASKCGVIGIGQSTKMI 1196          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE2.780e-27559.24Reverse transcriptase domain-containing protein n=... [more]
A0A3M2C3P5_9GAMM1.240e-8231.79Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO2.890e-7631.81Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A1R1YP44_9FUNG4.410e-6730.24LINE-1 retrotransposable element ORF2 protein (Fra... [more]
L7JX89_TRAHO1.160e-6633.80RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1X7T5_9FUNG1.420e-6629.66RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YD24_9FUNG9.340e-6428.34RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1X4V9_9FUNG1.480e-6328.51Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1YAQ4_9FUNG7.860e-6328.24RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1XKG1_9FUNG2.070e-6134.54RNA-directed DNA polymerase from mobile element jo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 2..115
e-value: 1.5E-8
score: 36.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 15..110
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 559..645
e-value: 5.2E-11
score: 42.5
coord: 453..558
e-value: 1.1E-17
score: 64.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 434..653
score: 11.642982
NoneNo IPR availablePANTHERPTHR47027:SF11SUBFAMILY NOT NAMEDcoord: 559..644
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 271..560
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 559..644
NoneNo IPR availablePANTHERPTHR47027:SF11SUBFAMILY NOT NAMEDcoord: 271..560
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 447..651
e-value: 2.55861E-52
score: 177.868
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 380..639

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1342contigP-littoralis_Contig1342:11724..13790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1342.1.1mRNA_P-littoralis_Contig1342.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1342 11724..13792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1342.1.1 ID=prot_P-littoralis_Contig1342.1.1|Name=mRNA_P-littoralis_Contig1342.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=653bp
GRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYP
IKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDIS
DHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMP
GSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADA
AATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARK
TRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPK
AFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERL
ASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKA
SGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTV
VSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQ
AGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALF
AKLDFYGVQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGL
LFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRR
LSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf